RNA–Protein interactions for RNA: ENST00000594511.1

XRCC1-204, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 4

Gene XRCC1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-204ENST00000594511 HSPA1BP0DMV9 641 aaKnown RBP13.23□□□□□ -0.29
XRCC1-204ENST00000594511 SEC23AQ15436 765 aa13.23□□□□□ -0.29
XRCC1-204ENST00000594511 C8orf34Q49A92 452 aa13.23□□□□□ -0.29
XRCC1-204ENST00000594511 RNF20Q5VTR2 975 aa13.23□□□□□ -0.29
XRCC1-204ENST00000594511 LBX2Q6XYB7 198 aa13.23□□□□□ -0.29
XRCC1-204ENST00000594511 CATSPERGQ6ZRH7 1159 aa13.23□□□□□ -0.29
XRCC1-204ENST00000594511 CYB5R4Q7L1T6 521 aa13.23□□□□□ -0.29
XRCC1-204ENST00000594511 RASEFQ8IZ41 740 aa13.23□□□□□ -0.29
XRCC1-204ENST00000594511 NCOA7Q8NI08 942 aa13.23□□□□□ -0.29
XRCC1-204ENST00000594511 R3HDMLQ9H3Y0 253 aa13.23□□□□□ -0.29
XRCC1-204ENST00000594511 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.23□□□□□ -0.29
XRCC1-204ENST00000594511 CLIP2Q9UDT6 1046 aa13.23□□□□□ -0.29
XRCC1-204ENST00000594511 USP17L15C9J2P7 530 aa13.22□□□□□ -0.29
XRCC1-204ENST00000594511 USP17L13C9JLJ4 530 aa13.22□□□□□ -0.29
XRCC1-204ENST00000594511 USP17L11C9JVI0 530 aa13.22□□□□□ -0.29
XRCC1-204ENST00000594511 USP17L18D6R9N7 530 aa13.22□□□□□ -0.29
XRCC1-204ENST00000594511 USP17L22D6RA61 530 aa13.22□□□□□ -0.29
XRCC1-204ENST00000594511 USP17L17D6RBQ6 530 aa13.22□□□□□ -0.29
XRCC1-204ENST00000594511 USP17L19D6RCP7 530 aa13.22□□□□□ -0.29
XRCC1-204ENST00000594511 USP17L20D6RJB6 530 aa13.22□□□□□ -0.29
XRCC1-204ENST00000594511 F5H6K3 240 aa13.22□□□□□ -0.29
XRCC1-204ENST00000594511 WDR46O15213 610 aaKnown RBP13.22□□□□□ -0.29
XRCC1-204ENST00000594511 FOXN1O15353 648 aa13.22□□□□□ -0.29
XRCC1-204ENST00000594511 NMT2O60551 498 aa13.22□□□□□ -0.29
XRCC1-204ENST00000594511 TLR2O60603 784 aa13.22□□□□□ -0.29
XRCC1-204ENST00000594511 PLA2G6O60733 806 aa13.22□□□□□ -0.29
XRCC1-204ENST00000594511 TOP1P11387 765 aaKnown RBP13.22□□□□□ -0.29
XRCC1-204ENST00000594511 VCAM1P19320 739 aa13.22□□□□□ -0.29
XRCC1-204ENST00000594511 KLRC3Q07444 240 aa13.22□□□□□ -0.29
XRCC1-204ENST00000594511 USP17L24Q0WX57 530 aa13.22□□□□□ -0.29
XRCC1-204ENST00000594511 PABPC4Q13310 644 aaKnown RBP eCLIP13.22□□□□□ -0.29
XRCC1-204ENST00000594511 DGKZQ13574 1117 aa13.22□□□□□ -0.29
XRCC1-204ENST00000594511 RRP12Q5JTH9 1297 aaKnown RBP13.22□□□□□ -0.29
XRCC1-204ENST00000594511 POTEEQ6S8J3 1075 aa13.22□□□□□ -0.29
XRCC1-204ENST00000594511 C17orf99Q6UX52 265 aa13.22□□□□□ -0.29
XRCC1-204ENST00000594511 GADL1Q6ZQY3 521 aa13.22□□□□□ -0.29
XRCC1-204ENST00000594511 GMCL1Q96IK5 515 aa13.22□□□□□ -0.29
XRCC1-204ENST00000594511 ADAMTS5Q9UNA0 930 aa13.22□□□□□ -0.29
XRCC1-204ENST00000594511 MYPNQ86TC9 1320 aa13.21□□□□□ -0.29
XRCC1-204ENST00000594511 WDR19Q8NEZ3 1342 aa13.21□□□□□ -0.29
XRCC1-204ENST00000594511 SNHG28P0DPA3 235 aa13.21□□□□□ -0.29
XRCC1-204ENST00000594511 HSPA8P11142 646 aaKnown RBP13.21□□□□□ -0.29
XRCC1-204ENST00000594511 BCRP11274 1271 aa13.21□□□□□ -0.29
XRCC1-204ENST00000594511 ANTXR2P58335 489 aa13.21□□□□□ -0.29
XRCC1-204ENST00000594511 EXOSC10Q01780 885 aaKnown RBP13.21□□□□□ -0.29
XRCC1-204ENST00000594511 TRDNQ13061 729 aa13.21□□□□□ -0.29
XRCC1-204ENST00000594511 CRHR2Q13324 411 aa13.21□□□□□ -0.29
XRCC1-204ENST00000594511 KRT32Q14532 448 aa13.21□□□□□ -0.29
XRCC1-204ENST00000594511 TAF1CQ15572 869 aaPredicted RBP13.21□□□□□ -0.29
XRCC1-204ENST00000594511 IQCA1Q86XH1 822 aa13.21□□□□□ -0.29
XRCC1-204ENST00000594511 FBXL16Q8N461 479 aa13.21□□□□□ -0.29
XRCC1-204ENST00000594511 ENAHQ8N8S7 591 aaPredicted RBP13.21□□□□□ -0.29
XRCC1-204ENST00000594511 IGDCC4Q8TDY8 1250 aa13.21□□□□□ -0.29
XRCC1-204ENST00000594511 ZSCAN10Q96SZ4 725 aaPredicted RBP13.21□□□□□ -0.29
XRCC1-204ENST00000594511 FEZ1Q99689 392 aa13.21□□□□□ -0.29
XRCC1-204ENST00000594511 TMEM47Q9BQJ4 181 aa13.21□□□□□ -0.29
XRCC1-204ENST00000594511 BEGAINQ9BUH8 593 aa13.21□□□□□ -0.29
XRCC1-204ENST00000594511 ASCC2Q9H1I8 757 aaPredicted RBP13.21□□□□□ -0.29
XRCC1-204ENST00000594511 ZFYVE28Q9HCC9 887 aa13.21□□□□□ -0.29
XRCC1-204ENST00000594511 GOPCQ9HD26 462 aa13.21□□□□□ -0.29
XRCC1-204ENST00000594511 PARP14Q460N5 1801 aa13.2□□□□□ -0.3
XRCC1-204ENST00000594511 GPR25O00155 361 aa13.2□□□□□ -0.3
XRCC1-204ENST00000594511 NDUFB10O96000 172 aa13.2□□□□□ -0.3
XRCC1-204ENST00000594511 ZKSCAN1P17029 563 aaPredicted RBP13.2□□□□□ -0.3
XRCC1-204ENST00000594511 OSBPP22059 807 aa13.2□□□□□ -0.3
XRCC1-204ENST00000594511 CTCFP49711 727 aaPredicted RBP13.2□□□□□ -0.3
XRCC1-204ENST00000594511 COL9A3Q14050 684 aaPredicted RBP13.2□□□□□ -0.3
XRCC1-204ENST00000594511 ADCK5Q3MIX3 580 aa13.2□□□□□ -0.3
XRCC1-204ENST00000594511 PARK7Q99497 189 aaKnown RBP13.2□□□□□ -0.3
XRCC1-204ENST00000594511 P2RX7Q99572 595 aaKnown RBP13.2□□□□□ -0.3
XRCC1-204ENST00000594511 TOMM22Q9NS69 142 aa13.2□□□□□ -0.3
XRCC1-204ENST00000594511 MORF4L1Q9UBU8 362 aa13.2□□□□□ -0.3
XRCC1-204ENST00000594511 PNMA3Q9UL41 463 aa13.2□□□□□ -0.3
XRCC1-204ENST00000594511 SNX14Q9Y5W7 946 aa13.2□□□□□ -0.3
XRCC1-204ENST00000594511 SEC24BO95487 1268 aa13.19□□□□□ -0.3
XRCC1-204ENST00000594511 TBC1D8O95759 1140 aa13.19□□□□□ -0.3
XRCC1-204ENST00000594511 GCLCP48506 637 aaPredicted RBP13.19□□□□□ -0.3
XRCC1-204ENST00000594511 RALYLQ86SE5 291 aaKnown RBP13.19□□□□□ -0.3
XRCC1-204ENST00000594511 GTF3C2Q8WUA4 911 aaPredicted RBP13.19□□□□□ -0.3
XRCC1-204ENST00000594511 TMEM87BQ96K49 555 aa13.19□□□□□ -0.3
XRCC1-204ENST00000594511 NEK1Q96PY6 1258 aa13.19□□□□□ -0.3
XRCC1-204ENST00000594511 TM6SF1Q9BZW5 370 aa13.19□□□□□ -0.3
XRCC1-204ENST00000594511 RPAP3Q9H6T3 665 aaPredicted RBP13.19□□□□□ -0.3
XRCC1-204ENST00000594511 PRDM10Q9NQV6 1147 aa13.19□□□□□ -0.3
XRCC1-204ENST00000594511 HOXC10Q9NYD6 342 aa13.19□□□□□ -0.3
XRCC1-204ENST00000594511 STX8Q9UNK0 236 aa13.19□□□□□ -0.3
XRCC1-204ENST00000594511 TNKSO95271 1327 aa13.18□□□□□ -0.3
XRCC1-204ENST00000594511 HMGB1P09429 215 aaKnown RBP13.18□□□□□ -0.3
XRCC1-204ENST00000594511 CYP2C8P10632 490 aa13.18□□□□□ -0.3
XRCC1-204ENST00000594511 DSG3P32926 999 aa13.18□□□□□ -0.3
XRCC1-204ENST00000594511 MCM5P33992 734 aa13.18□□□□□ -0.3
XRCC1-204ENST00000594511 LIFRP42702 1097 aa13.18□□□□□ -0.3
XRCC1-204ENST00000594511 ANAPC15P60006 121 aa13.18□□□□□ -0.3
XRCC1-204ENST00000594511 HERVK_113P62684 666 aa13.18□□□□□ -0.3
XRCC1-204ENST00000594511 COG2Q14746 738 aa13.18□□□□□ -0.3
XRCC1-204ENST00000594511 ZYXQ15942 572 aaKnown RBP13.18□□□□□ -0.3
XRCC1-204ENST00000594511 SLFN13Q68D06 897 aa13.18□□□□□ -0.3
XRCC1-204ENST00000594511 BTNL9Q6UXG8 535 aa13.18□□□□□ -0.3
XRCC1-204ENST00000594511 DHX32Q7L7V1 743 aaKnown RBP13.18□□□□□ -0.3
XRCC1-204ENST00000594511 DCAF4Q8WV16 495 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms