RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 ACRP10323 421 aa7.69□□□□□ -1.18
SMAD4-216ENST00000593223 SPINK2P20155 84 aa7.69□□□□□ -1.18
SMAD4-216ENST00000593223 CLCN7P51798 805 aa7.69□□□□□ -1.18
SMAD4-216ENST00000593223 TNK2Q07912 1038 aa7.69□□□□□ -1.18
SMAD4-216ENST00000593223 AOC3Q16853 763 aa7.69□□□□□ -1.18
SMAD4-216ENST00000593223 ARTNQ5T4W7 220 aa7.69□□□□□ -1.18
SMAD4-216ENST00000593223 STK11IPQ8N1F8 1099 aa7.69□□□□□ -1.18
SMAD4-216ENST00000593223 TAB3Q8N5C8 712 aaPredicted RBP7.69□□□□□ -1.18
SMAD4-216ENST00000593223 MISP3Q96FF7 219 aa7.69□□□□□ -1.18
SMAD4-216ENST00000593223 ZNF512BQ96KM6 892 aaPredicted RBP7.69□□□□□ -1.18
SMAD4-216ENST00000593223 SLC5A6Q9Y289 635 aa7.69□□□□□ -1.18
SMAD4-216ENST00000593223 SNX11Q9Y5W9 270 aa7.69□□□□□ -1.18
SMAD4-216ENST00000593223 H3BS24 57 aa7.68□□□□□ -1.18
SMAD4-216ENST00000593223 RBAK-RBAKDNI3L0D1 243 aa7.68□□□□□ -1.18
SMAD4-216ENST00000593223 LRRN2O75325 713 aa7.68□□□□□ -1.18
SMAD4-216ENST00000593223 UNC5AQ6ZN44 842 aa7.68□□□□□ -1.18
SMAD4-216ENST00000593223 VSIG10LQ86VR7 867 aa7.68□□□□□ -1.18
SMAD4-216ENST00000593223 TMEM192Q8IY95 271 aa7.68□□□□□ -1.18
SMAD4-216ENST00000593223 FLCNQ8NFG4 579 aa7.68□□□□□ -1.18
SMAD4-216ENST00000593223 PIWIL2Q8TC59 973 aaKnown RBP7.68□□□□□ -1.18
SMAD4-216ENST00000593223 Q96M66 194 aa7.68□□□□□ -1.18
SMAD4-216ENST00000593223 HSPA12BQ96MM6 686 aa7.68□□□□□ -1.18
SMAD4-216ENST00000593223 C8orf37Q96NL8 207 aa7.68□□□□□ -1.18
SMAD4-216ENST00000593223 KRTAP4-12Q9BQ66 201 aa7.68□□□□□ -1.18
SMAD4-216ENST00000593223 MKRN2Q9H000 416 aaKnown RBP7.68□□□□□ -1.18
SMAD4-216ENST00000593223 ASCC2Q9H1I8 757 aaPredicted RBP7.68□□□□□ -1.18
SMAD4-216ENST00000593223 TNKS2Q9H2K2 1166 aa7.68□□□□□ -1.18
SMAD4-216ENST00000593223 CCDC39Q9UFE4 941 aa7.68□□□□□ -1.18
SMAD4-216ENST00000593223 VAV3Q9UKW4 847 aa7.68□□□□□ -1.18
SMAD4-216ENST00000593223 WNT11O96014 354 aa7.67□□□□□ -1.18
SMAD4-216ENST00000593223 FGRP09769 529 aa7.67□□□□□ -1.18
SMAD4-216ENST00000593223 PRKCQQ04759 706 aa7.67□□□□□ -1.18
SMAD4-216ENST00000593223 BNIP3Q12983 259 aa7.67□□□□□ -1.18
SMAD4-216ENST00000593223 ZYXQ15942 572 aaKnown RBP7.67□□□□□ -1.18
SMAD4-216ENST00000593223 LCE3BQ5TA77 95 aa7.67□□□□□ -1.18
SMAD4-216ENST00000593223 TTC6Q86TZ1 520 aa7.67□□□□□ -1.18
SMAD4-216ENST00000593223 MCF2L2Q86YR7 1114 aa7.67□□□□□ -1.18
SMAD4-216ENST00000593223 DTWD2Q8NBA8 298 aa7.67□□□□□ -1.18
SMAD4-216ENST00000593223 ASB11Q8WXH4 323 aa7.67□□□□□ -1.18
SMAD4-216ENST00000593223 FBXL18Q96ME1 805 aa7.67□□□□□ -1.18
SMAD4-216ENST00000593223 TANGO6Q9C0B7 1094 aa7.67□□□□□ -1.18
SMAD4-216ENST00000593223 FAM86C1Q9NVL1 165 aa7.67□□□□□ -1.18
SMAD4-216ENST00000593223 ZSWIM5Q9P217 1185 aa7.67□□□□□ -1.18
SMAD4-216ENST00000593223 SLC12A7Q9Y666 1083 aa7.67□□□□□ -1.18
SMAD4-216ENST00000593223 PRNPP04156 253 aa7.66□□□□□ -1.18
SMAD4-216ENST00000593223 CLEC16AQ2KHT3 1053 aa7.66□□□□□ -1.18
SMAD4-216ENST00000593223 NBPF12Q5TAG4 269 aaPredicted RBP7.66□□□□□ -1.18
SMAD4-216ENST00000593223 CCDC144CPQ8IYA2 1237 aa7.66□□□□□ -1.18
SMAD4-216ENST00000593223 C19orf47Q8N9M1 422 aaKnown RBP7.66□□□□□ -1.18
SMAD4-216ENST00000593223 BCL7CQ8WUZ0 217 aaPredicted RBP7.66□□□□□ -1.18
SMAD4-216ENST00000593223 GMLQ99445 158 aa7.66□□□□□ -1.18
SMAD4-216ENST00000593223 TRIT1Q9H3H1 467 aaKnown RBP7.66□□□□□ -1.18
SMAD4-216ENST00000593223 SUCOQ9UBS9 1254 aaKnown RBP7.66□□□□□ -1.18
SMAD4-216ENST00000593223 PPP1R1BQ9UD71 204 aaPredicted RBP7.66□□□□□ -1.18
SMAD4-216ENST00000593223 ST14Q9Y5Y6 855 aa7.66□□□□□ -1.18
SMAD4-216ENST00000593223 RB1CC1Q8TDY2 1594 aa7.66□□□□□ -1.18
SMAD4-216ENST00000593223 A0A1W2PQH9 124 aa7.65□□□□□ -1.18
SMAD4-216ENST00000593223 SMAD7O15105 426 aaKnown RBP7.65□□□□□ -1.18
SMAD4-216ENST00000593223 TP53P04637 393 aaPredicted RBP7.65□□□□□ -1.18
SMAD4-216ENST00000593223 IKZF1Q13422 519 aa7.65□□□□□ -1.18
SMAD4-216ENST00000593223 BBS9Q3SYG4 887 aa7.65□□□□□ -1.18
SMAD4-216ENST00000593223 TDRD10Q5VZ19 366 aaKnown RBP7.65□□□□□ -1.18
SMAD4-216ENST00000593223 NBPF11Q86T75 865 aa7.65□□□□□ -1.18
SMAD4-216ENST00000593223 TP53INP2Q8IXH6 220 aa7.65□□□□□ -1.18
SMAD4-216ENST00000593223 FAM169BQ8N8A8 192 aa7.65□□□□□ -1.18
SMAD4-216ENST00000593223 UBE2FQ969M7 185 aa7.65□□□□□ -1.18
SMAD4-216ENST00000593223 GPATCH2Q9NW75 528 aa7.65□□□□□ -1.18
SMAD4-216ENST00000593223 FBXL21Q9UKT6 434 aa7.65□□□□□ -1.18
SMAD4-216ENST00000593223 COL17A1Q9UMD9 1497 aaPredicted RBP7.65□□□□□ -1.18
SMAD4-216ENST00000593223 R3HCC1Q9Y3T6 440 aaKnown RBP7.65□□□□□ -1.18
SMAD4-216ENST00000593223 ETFBP38117 255 aa7.64□□□□□ -1.19
SMAD4-216ENST00000593223 CD96P40200 585 aa7.64□□□□□ -1.19
SMAD4-216ENST00000593223 PMS1P54277 932 aaKnown RBP7.64□□□□□ -1.19
SMAD4-216ENST00000593223 TNNI3KQ59H18 835 aa7.64□□□□□ -1.19
SMAD4-216ENST00000593223 ZNF574Q6ZN55 896 aaPredicted RBP7.64□□□□□ -1.19
SMAD4-216ENST00000593223 VWCEQ96DN2 955 aa7.64□□□□□ -1.19
SMAD4-216ENST00000593223 ZNF408Q9H9D4 720 aa7.64□□□□□ -1.19
SMAD4-216ENST00000593223 PITPNM2Q9BZ72 1349 aa7.63□□□□□ -1.19
SMAD4-216ENST00000593223 LTBP3Q9NS15 1303 aa7.63□□□□□ -1.19
SMAD4-216ENST00000593223 ATP2B1P20020 1258 aa7.63□□□□□ -1.19
SMAD4-216ENST00000593223 NBPF9Q3BBW0 867 aa7.63□□□□□ -1.19
SMAD4-216ENST00000593223 GNPTABQ3T906 1256 aa7.63□□□□□ -1.19
SMAD4-216ENST00000593223 ANGEL2Q5VTE6 544 aaKnown RBP7.63□□□□□ -1.19
SMAD4-216ENST00000593223 THAP5Q7Z6K1 395 aa7.63□□□□□ -1.19
SMAD4-216ENST00000593223 PHAXQ9H814 394 aaKnown RBP7.63□□□□□ -1.19
SMAD4-216ENST00000593223 ATP13A1Q9HD20 1204 aa7.63□□□□□ -1.19
SMAD4-216ENST00000593223 SEMA3GQ9NS98 782 aa7.63□□□□□ -1.19
SMAD4-216ENST00000593223 ACTR10Q9NZ32 417 aa7.63□□□□□ -1.19
SMAD4-216ENST00000593223 PRKAG3Q9UGI9 489 aa7.63□□□□□ -1.19
SMAD4-216ENST00000593223 PCDHB10Q9UN67 800 aa7.63□□□□□ -1.19
SMAD4-216ENST00000593223 CC2D2AQ9P2K1 1620 aa7.63□□□□□ -1.19
SMAD4-216ENST00000593223 C9IYK1 514 aa7.62□□□□□ -1.19
SMAD4-216ENST00000593223 ADAMTS4O75173 837 aa7.62□□□□□ -1.19
SMAD4-216ENST00000593223 STK10O94804 968 aaKnown RBP7.62□□□□□ -1.19
SMAD4-216ENST00000593223 CD8BP10966 210 aa7.62□□□□□ -1.19
SMAD4-216ENST00000593223 TPP2P29144 1249 aaPredicted RBP7.62□□□□□ -1.19
SMAD4-216ENST00000593223 CASP7P55210 303 aa7.62□□□□□ -1.19
SMAD4-216ENST00000593223 SLC7A5Q01650 507 aa7.62□□□□□ -1.19
SMAD4-216ENST00000593223 NMIQ13287 307 aaPredicted RBP7.62□□□□□ -1.19
SMAD4-216ENST00000593223 LARP1BQ659C4 914 aaKnown RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms