RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 BEGAINQ9BUH8 593 aa11.73□□□□□ -0.53
TPM4-216ENST00000592822 CFHR5Q9BXR6 569 aa11.73□□□□□ -0.53
TPM4-216ENST00000592822 VCPKMTQ9H867 229 aa11.73□□□□□ -0.53
TPM4-216ENST00000592822 TSKSQ9UJT2 592 aa11.73□□□□□ -0.53
TPM4-216ENST00000592822 SLC45A1Q9Y2W3 748 aa11.73□□□□□ -0.53
TPM4-216ENST00000592822 SEC24BO95487 1268 aa11.72□□□□□ -0.53
TPM4-216ENST00000592822 TBC1D8O95759 1140 aa11.72□□□□□ -0.53
TPM4-216ENST00000592822 CYP2C8P10632 490 aa11.72□□□□□ -0.53
TPM4-216ENST00000592822 VCAM1P19320 739 aa11.72□□□□□ -0.53
TPM4-216ENST00000592822 HOXA7P31268 230 aaPredicted RBP11.72□□□□□ -0.53
TPM4-216ENST00000592822 TRDNQ13061 729 aa11.72□□□□□ -0.53
TPM4-216ENST00000592822 TAF1CQ15572 869 aaPredicted RBP11.72□□□□□ -0.53
TPM4-216ENST00000592822 TSGA10IPQ3SY00 556 aa11.72□□□□□ -0.53
TPM4-216ENST00000592822 MB21D2Q8IYB1 491 aaPredicted RBP11.72□□□□□ -0.53
TPM4-216ENST00000592822 SPICE1Q8N0Z3 855 aa11.72□□□□□ -0.53
TPM4-216ENST00000592822 LRRC47Q8N1G4 583 aaKnown RBP11.72□□□□□ -0.53
TPM4-216ENST00000592822 NCOA7Q8NI08 942 aa11.72□□□□□ -0.53
TPM4-216ENST00000592822 LPAR1Q92633 364 aa11.72□□□□□ -0.53
TPM4-216ENST00000592822 ZSCAN10Q96SZ4 725 aaPredicted RBP11.72□□□□□ -0.53
TPM4-216ENST00000592822 GOPCQ9HD26 462 aa11.72□□□□□ -0.53
TPM4-216ENST00000592822 SYNPO2Q9UMS6 1093 aa11.72□□□□□ -0.53
TPM4-216ENST00000592822 STX8Q9UNK0 236 aa11.72□□□□□ -0.53
TPM4-216ENST00000592822 ADGRA2Q96PE1 1338 aa11.71□□□□□ -0.53
TPM4-216ENST00000592822 RLFQ13129 1914 aa11.71□□□□□ -0.53
TPM4-216ENST00000592822 F5H6K3 240 aa11.71□□□□□ -0.53
TPM4-216ENST00000592822 NDUFB10O96000 172 aa11.71□□□□□ -0.53
TPM4-216ENST00000592822 HSPA8P11142 646 aaKnown RBP11.71□□□□□ -0.53
TPM4-216ENST00000592822 TOP1P11387 765 aaKnown RBP11.71□□□□□ -0.53
TPM4-216ENST00000592822 ANTXR2P58335 489 aa11.71□□□□□ -0.53
TPM4-216ENST00000592822 KLRC3Q07444 240 aa11.71□□□□□ -0.53
TPM4-216ENST00000592822 PPP4R3BQ5MIZ7 849 aa11.71□□□□□ -0.53
TPM4-216ENST00000592822 CATSPERGQ6ZRH7 1159 aa11.71□□□□□ -0.53
TPM4-216ENST00000592822 CHST3Q7LGC8 479 aa11.71□□□□□ -0.53
TPM4-216ENST00000592822 RALYLQ86SE5 291 aaKnown RBP11.71□□□□□ -0.53
TPM4-216ENST00000592822 IQCA1Q86XH1 822 aa11.71□□□□□ -0.53
TPM4-216ENST00000592822 ENAHQ8N8S7 591 aaPredicted RBP11.71□□□□□ -0.53
TPM4-216ENST00000592822 GMCL1P1Q8NEA9 526 aa11.71□□□□□ -0.53
TPM4-216ENST00000592822 ANKS1AQ92625 1134 aa11.71□□□□□ -0.53
TPM4-216ENST00000592822 TTC14Q96N46 770 aa11.71□□□□□ -0.53
TPM4-216ENST00000592822 TMEM47Q9BQJ4 181 aa11.71□□□□□ -0.53
TPM4-216ENST00000592822 ASCC2Q9H1I8 757 aaPredicted RBP11.71□□□□□ -0.53
TPM4-216ENST00000592822 RPAP3Q9H6T3 665 aaPredicted RBP11.71□□□□□ -0.53
TPM4-216ENST00000592822 ZFYVE28Q9HCC9 887 aa11.71□□□□□ -0.53
TPM4-216ENST00000592822 SNX14Q9Y5W7 946 aa11.71□□□□□ -0.53
TPM4-216ENST00000592822 PARP14Q460N5 1801 aa11.71□□□□□ -0.54
TPM4-216ENST00000592822 TNKSO95271 1327 aa11.7□□□□□ -0.54
TPM4-216ENST00000592822 USP17L15C9J2P7 530 aa11.7□□□□□ -0.54
TPM4-216ENST00000592822 USP17L13C9JLJ4 530 aa11.7□□□□□ -0.54
TPM4-216ENST00000592822 USP17L11C9JVI0 530 aa11.7□□□□□ -0.54
TPM4-216ENST00000592822 USP17L18D6R9N7 530 aa11.7□□□□□ -0.54
TPM4-216ENST00000592822 USP17L22D6RA61 530 aa11.7□□□□□ -0.54
TPM4-216ENST00000592822 USP17L17D6RBQ6 530 aa11.7□□□□□ -0.54
TPM4-216ENST00000592822 USP17L19D6RCP7 530 aa11.7□□□□□ -0.54
TPM4-216ENST00000592822 USP17L20D6RJB6 530 aa11.7□□□□□ -0.54
TPM4-216ENST00000592822 WDR46O15213 610 aaKnown RBP11.7□□□□□ -0.54
TPM4-216ENST00000592822 RAD21O60216 631 aa11.7□□□□□ -0.54
TPM4-216ENST00000592822 ZKSCAN1P17029 563 aaPredicted RBP11.7□□□□□ -0.54
TPM4-216ENST00000592822 OSBPP22059 807 aa11.7□□□□□ -0.54
TPM4-216ENST00000592822 USP17L24Q0WX57 530 aa11.7□□□□□ -0.54
TPM4-216ENST00000592822 PABPC4Q13310 644 aaKnown RBP eCLIP11.7□□□□□ -0.54
TPM4-216ENST00000592822 SEC23AQ15436 765 aa11.7□□□□□ -0.54
TPM4-216ENST00000592822 ADCK5Q3MIX3 580 aa11.7□□□□□ -0.54
TPM4-216ENST00000592822 CCDC178Q5BJE1 867 aa11.7□□□□□ -0.54
TPM4-216ENST00000592822 POTEEQ6S8J3 1075 aa11.7□□□□□ -0.54
TPM4-216ENST00000592822 DGKHQ86XP1 1220 aa11.7□□□□□ -0.54
TPM4-216ENST00000592822 PARK7Q99497 189 aaKnown RBP11.7□□□□□ -0.54
TPM4-216ENST00000592822 NUP88Q99567 741 aaPredicted RBP11.7□□□□□ -0.54
TPM4-216ENST00000592822 P2RX7Q99572 595 aaKnown RBP11.7□□□□□ -0.54
TPM4-216ENST00000592822 UBAC1Q9BSL1 405 aa11.7□□□□□ -0.54
TPM4-216ENST00000592822 TLR2O60603 784 aa11.69□□□□□ -0.54
TPM4-216ENST00000592822 MCM5P33992 734 aa11.69□□□□□ -0.54
TPM4-216ENST00000592822 CTCFP49711 727 aaPredicted RBP11.69□□□□□ -0.54
TPM4-216ENST00000592822 IRX3P78415 501 aaPredicted RBP11.69□□□□□ -0.54
TPM4-216ENST00000592822 KRT32Q14532 448 aa11.69□□□□□ -0.54
TPM4-216ENST00000592822 FAM83BQ5T0W9 1011 aa11.69□□□□□ -0.54
TPM4-216ENST00000592822 SLFN13Q68D06 897 aa11.69□□□□□ -0.54
TPM4-216ENST00000592822 RASGRP2Q7LDG7 609 aa11.69□□□□□ -0.54
TPM4-216ENST00000592822 NEK1Q96PY6 1258 aa11.69□□□□□ -0.54
TPM4-216ENST00000592822 TANGO6Q9C0B7 1094 aa11.69□□□□□ -0.54
TPM4-216ENST00000592822 SENP2Q9HC62 589 aa11.69□□□□□ -0.54
TPM4-216ENST00000592822 GPHNQ9NQX3 736 aaPredicted RBP11.69□□□□□ -0.54
TPM4-216ENST00000592822 CPA4Q9UI42 421 aa11.69□□□□□ -0.54
TPM4-216ENST00000592822 PNMA3Q9UL41 463 aa11.69□□□□□ -0.54
TPM4-216ENST00000592822 GPR25O00155 361 aa11.68□□□□□ -0.54
TPM4-216ENST00000592822 IFIT3O14879 490 aaKnown RBP11.68□□□□□ -0.54
TPM4-216ENST00000592822 PRC1O43663 620 aa11.68□□□□□ -0.54
TPM4-216ENST00000592822 EIF5BO60841 1220 aaKnown RBP11.68□□□□□ -0.54
TPM4-216ENST00000592822 MCCP23508 829 aa11.68□□□□□ -0.54
TPM4-216ENST00000592822 LBX1P52954 281 aa11.68□□□□□ -0.54
TPM4-216ENST00000592822 HERVK_113P62684 666 aa11.68□□□□□ -0.54
TPM4-216ENST00000592822 NOM1Q5C9Z4 860 aaKnown RBP11.68□□□□□ -0.54
TPM4-216ENST00000592822 C17orf99Q6UX52 265 aa11.68□□□□□ -0.54
TPM4-216ENST00000592822 IGDCC4Q8TDY8 1250 aa11.68□□□□□ -0.54
TPM4-216ENST00000592822 SMCR8Q8TEV9 937 aaPredicted RBP11.68□□□□□ -0.54
TPM4-216ENST00000592822 CHMP4CQ96CF2 233 aa11.68□□□□□ -0.54
TPM4-216ENST00000592822 GMCL1Q96IK5 515 aa11.68□□□□□ -0.54
TPM4-216ENST00000592822 FBXO28Q9NVF7 368 aa11.68□□□□□ -0.54
TPM4-216ENST00000592822 MTMR7Q9Y216 660 aa11.68□□□□□ -0.54
TPM4-216ENST00000592822 CASP8AP2Q9UKL3 1982 aa11.68□□□□□ -0.54
TPM4-216ENST00000592822 PEX10O60683 326 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms