RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 ZNF710Q8N1W2 664 aa18.91■□□□□ 0.62
PRKCSH-217ENST00000592741 ENOX1Q8TC92 643 aaKnown RBP18.91■□□□□ 0.62
PRKCSH-217ENST00000592741 SYMPKQ92797 1274 aaKnown RBP18.91■□□□□ 0.62
PRKCSH-217ENST00000592741 PPP4CP60510 307 aa18.9■□□□□ 0.62
PRKCSH-217ENST00000592741 ATP2C1P98194 919 aaPredicted RBP18.9■□□□□ 0.62
PRKCSH-217ENST00000592741 VSTM4Q8IW00 320 aa18.9■□□□□ 0.62
PRKCSH-217ENST00000592741 SPATA20Q8TB22 786 aa18.9■□□□□ 0.62
PRKCSH-217ENST00000592741 ZNF592Q92610 1267 aa18.9■□□□□ 0.62
PRKCSH-217ENST00000592741 EPSTI1Q96J88 318 aa18.9■□□□□ 0.62
PRKCSH-217ENST00000592741 MKNK2Q9HBH9 465 aa18.9■□□□□ 0.62
PRKCSH-217ENST00000592741 SLFN14P0C7P3 912 aa18.89■□□□□ 0.62
PRKCSH-217ENST00000592741 CALML3P27482 149 aa18.89■□□□□ 0.62
PRKCSH-217ENST00000592741 ANKS1AQ92625 1134 aa18.89■□□□□ 0.62
PRKCSH-217ENST00000592741 PSDA5PKW4 1024 aaPredicted RBP18.89■□□□□ 0.61
PRKCSH-217ENST00000592741 WNT7AO00755 349 aa18.89■□□□□ 0.61
PRKCSH-217ENST00000592741 TOP1P11387 765 aaKnown RBP18.89■□□□□ 0.61
PRKCSH-217ENST00000592741 PLCD1P51178 756 aa18.89■□□□□ 0.61
PRKCSH-217ENST00000592741 ZNF827Q17R98 1081 aa18.89■□□□□ 0.61
PRKCSH-217ENST00000592741 NOM1Q5C9Z4 860 aaKnown RBP18.89■□□□□ 0.61
PRKCSH-217ENST00000592741 PRR5LQ6MZQ0 368 aa18.89■□□□□ 0.61
PRKCSH-217ENST00000592741 PIK3AP1Q6ZUJ8 805 aa18.89■□□□□ 0.61
PRKCSH-217ENST00000592741 CERS3Q8IU89 383 aa18.89■□□□□ 0.61
PRKCSH-217ENST00000592741 PNMA1Q8ND90 353 aa18.89■□□□□ 0.61
PRKCSH-217ENST00000592741 DYNLL2Q96FJ2 89 aa18.89■□□□□ 0.61
PRKCSH-217ENST00000592741 GJD4Q96KN9 370 aaPredicted RBP18.89■□□□□ 0.61
PRKCSH-217ENST00000592741 NFE2L3Q9Y4A8 694 aa18.89■□□□□ 0.61
PRKCSH-217ENST00000592741 A0A087X0B3 334 aa18.88■□□□□ 0.61
PRKCSH-217ENST00000592741 GNAQP50148 359 aa18.88■□□□□ 0.61
PRKCSH-217ENST00000592741 FMR1Q06787 632 aaKnown RBP eCLIP18.88■□□□□ 0.61
PRKCSH-217ENST00000592741 PTGDRQ13258 359 aa18.88■□□□□ 0.61
PRKCSH-217ENST00000592741 DIXDC1Q155Q3 683 aa18.88■□□□□ 0.61
PRKCSH-217ENST00000592741 CT47A1Q5JQC4 288 aaPredicted RBP18.88■□□□□ 0.61
PRKCSH-217ENST00000592741 E4F1Q66K89 784 aaPredicted RBP18.88■□□□□ 0.61
PRKCSH-217ENST00000592741 SLC51AQ86UW1 340 aa18.88■□□□□ 0.61
PRKCSH-217ENST00000592741 SH3GLB2Q9NR46 395 aa18.88■□□□□ 0.61
PRKCSH-217ENST00000592741 IL17RBQ9NRM6 502 aa18.88■□□□□ 0.61
PRKCSH-217ENST00000592741 VWA3AA6NCI4 1184 aa18.88■□□□□ 0.61
PRKCSH-217ENST00000592741 TSPY3P0CV98 308 aa18.88■□□□□ 0.61
PRKCSH-217ENST00000592741 TSPY8P0CW00 308 aa18.88■□□□□ 0.61
PRKCSH-217ENST00000592741 CDK11BP21127 795 aaKnown RBP18.88■□□□□ 0.61
PRKCSH-217ENST00000592741 ERCC5P28715 1186 aaPredicted RBP18.88■□□□□ 0.61
PRKCSH-217ENST00000592741 ST5P78524 1137 aa18.88■□□□□ 0.61
PRKCSH-217ENST00000592741 GPSM2P81274 684 aa18.88■□□□□ 0.61
PRKCSH-217ENST00000592741 GRM4Q14833 912 aa18.88■□□□□ 0.61
PRKCSH-217ENST00000592741 SH3RF1Q7Z6J0 888 aa18.88■□□□□ 0.61
PRKCSH-217ENST00000592741 PAGE5Q96GU1 130 aa18.88■□□□□ 0.61
PRKCSH-217ENST00000592741 TCP11L1Q9NUJ3 509 aa18.88■□□□□ 0.61
PRKCSH-217ENST00000592741 CCP110O43303 1012 aa18.87■□□□□ 0.61
PRKCSH-217ENST00000592741 ZNF18P17022 549 aa18.87■□□□□ 0.61
PRKCSH-217ENST00000592741 ATP2B4P23634 1241 aa18.87■□□□□ 0.61
PRKCSH-217ENST00000592741 SYCP1Q15431 976 aa18.87■□□□□ 0.61
PRKCSH-217ENST00000592741 GLIPR1L2Q4G1C9 344 aa18.87■□□□□ 0.61
PRKCSH-217ENST00000592741 ZNF444Q8N0Y2 327 aaPredicted RBP18.87■□□□□ 0.61
PRKCSH-217ENST00000592741 CERKQ8TCT0 537 aa18.87■□□□□ 0.61
PRKCSH-217ENST00000592741 TGFBRAP1Q8WUH2 860 aa18.87■□□□□ 0.61
PRKCSH-217ENST00000592741 GPR101Q96P66 508 aaPredicted RBP18.87■□□□□ 0.61
PRKCSH-217ENST00000592741 PYM1Q9BRP8 204 aaKnown RBP18.87■□□□□ 0.61
PRKCSH-217ENST00000592741 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.86■□□□□ 0.61
PRKCSH-217ENST00000592741 TMEM232C9JQI7 657 aa18.86■□□□□ 0.61
PRKCSH-217ENST00000592741 UFL1O94874 794 aa18.86■□□□□ 0.61
PRKCSH-217ENST00000592741 AFMP43652 599 aa18.86■□□□□ 0.61
PRKCSH-217ENST00000592741 GRIK5Q16478 980 aa18.86■□□□□ 0.61
PRKCSH-217ENST00000592741 MEX3CQ5U5Q3 659 aaKnown RBP18.86■□□□□ 0.61
PRKCSH-217ENST00000592741 PPP1R13BQ96KQ4 1090 aa18.86■□□□□ 0.61
PRKCSH-217ENST00000592741 TRMT44Q8IYL2 757 aaKnown RBP18.86■□□□□ 0.61
PRKCSH-217ENST00000592741 BLIDQ8IZY5 108 aa18.86■□□□□ 0.61
PRKCSH-217ENST00000592741 KIF18AQ8NI77 898 aa18.86■□□□□ 0.61
PRKCSH-217ENST00000592741 RBM17Q96I25 401 aaKnown RBP18.86■□□□□ 0.61
PRKCSH-217ENST00000592741 RTFDC1Q9BY42 306 aaPredicted RBP18.86■□□□□ 0.61
PRKCSH-217ENST00000592741 ZNF287Q9HBT7 754 aa18.86■□□□□ 0.61
PRKCSH-217ENST00000592741 GGA1Q9UJY5 639 aa18.86■□□□□ 0.61
PRKCSH-217ENST00000592741 CRY2Q49AN0 593 aa18.85■□□□□ 0.61
PRKCSH-217ENST00000592741 ANKRD7Q92527 254 aa18.85■□□□□ 0.61
PRKCSH-217ENST00000592741 BCL11BQ9C0K0 894 aaPredicted RBP18.85■□□□□ 0.61
PRKCSH-217ENST00000592741 CD209Q9NNX6 404 aa18.85■□□□□ 0.61
PRKCSH-217ENST00000592741 LRRC4BQ9NT99 713 aa18.85■□□□□ 0.61
PRKCSH-217ENST00000592741 INTS13Q9NVM9 706 aa18.85■□□□□ 0.61
PRKCSH-217ENST00000592741 PCDHA4Q9UN74 947 aa18.85■□□□□ 0.61
PRKCSH-217ENST00000592741 USP17L3A6NCW0 530 aa18.85■□□□□ 0.61
PRKCSH-217ENST00000592741 USP17L4A6NCW7 530 aa18.85■□□□□ 0.61
PRKCSH-217ENST00000592741 MCM7P33993 719 aa18.85■□□□□ 0.61
PRKCSH-217ENST00000592741 DPYDQ12882 1025 aa18.85■□□□□ 0.61
PRKCSH-217ENST00000592741 USP17L1Q7RTZ2 530 aa18.85■□□□□ 0.61
PRKCSH-217ENST00000592741 MAPKAPK5Q8IW41 473 aa18.85■□□□□ 0.61
PRKCSH-217ENST00000592741 GSDMAQ96QA5 445 aa18.85■□□□□ 0.61
PRKCSH-217ENST00000592741 UBR3Q6ZT12 1888 aa18.84■□□□□ 0.61
PRKCSH-217ENST00000592741 TUBB4AP04350 444 aa18.84■□□□□ 0.61
PRKCSH-217ENST00000592741 VEGFAP15692 232 aaPredicted RBP18.84■□□□□ 0.61
PRKCSH-217ENST00000592741 BTDP43251 543 aa18.84■□□□□ 0.61
PRKCSH-217ENST00000592741 HSP90AA4PQ58FG1 418 aa18.84■□□□□ 0.61
PRKCSH-217ENST00000592741 STAG2Q8N3U4 1231 aa18.84■□□□□ 0.61
PRKCSH-217ENST00000592741 IQUBQ8NA54 791 aa18.84■□□□□ 0.61
PRKCSH-217ENST00000592741 GPKOWQ92917 476 aaPredicted RBP eCLIP18.84■□□□□ 0.61
PRKCSH-217ENST00000592741 SAP30BPQ9UHR5 308 aaKnown RBP18.84■□□□□ 0.61
PRKCSH-217ENST00000592741 MAD2L2Q9UI95 211 aa18.84■□□□□ 0.61
PRKCSH-217ENST00000592741 SERPINB2P05120 415 aa18.83■□□□□ 0.61
PRKCSH-217ENST00000592741 IL1R1P14778 569 aa18.83■□□□□ 0.61
PRKCSH-217ENST00000592741 ARL6IP4Q66PJ3 421 aaKnown RBP18.83■□□□□ 0.61
PRKCSH-217ENST00000592741 CCDC148Q8NFR7 591 aa18.83■□□□□ 0.61
PRKCSH-217ENST00000592741 TMX1Q9H3N1 280 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms