RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 NBPF3Q9H094 633 aa12.23□□□□□ -0.45
VMP1-214ENST00000592106 BOLA2Q9H3K6 86 aa12.23□□□□□ -0.45
VMP1-214ENST00000592106 RPAP3Q9H6T3 665 aaPredicted RBP12.23□□□□□ -0.45
VMP1-214ENST00000592106 SH2D4AQ9H788 454 aa12.23□□□□□ -0.45
VMP1-214ENST00000592106 ARHGEF10LQ9HCE6 1279 aa12.23□□□□□ -0.45
VMP1-214ENST00000592106 ATP8A2Q9NTI2 1148 aa12.23□□□□□ -0.45
VMP1-214ENST00000592106 PLXNB2O15031 1838 aa12.23□□□□□ -0.45
VMP1-214ENST00000592106 A0A1W2PPC1 479 aa12.22□□□□□ -0.45
VMP1-214ENST00000592106 ATP5JP18859 108 aa12.22□□□□□ -0.45
VMP1-214ENST00000592106 ADD2P35612 726 aa12.22□□□□□ -0.45
VMP1-214ENST00000592106 GABPAQ06546 454 aa12.22□□□□□ -0.45
VMP1-214ENST00000592106 MAP2K5Q13163 448 aa12.22□□□□□ -0.45
VMP1-214ENST00000592106 SEPT2Q15019 361 aa12.22□□□□□ -0.45
VMP1-214ENST00000592106 MAP3K21Q5TCX8 1036 aa12.22□□□□□ -0.45
VMP1-214ENST00000592106 MFSD14CQ5VZR4 134 aa12.22□□□□□ -0.45
VMP1-214ENST00000592106 LCORLQ8N3X6 602 aa12.22□□□□□ -0.45
VMP1-214ENST00000592106 SDR42E1Q8WUS8 393 aa12.22□□□□□ -0.45
VMP1-214ENST00000592106 RNF25Q96BH1 459 aaPredicted RBP12.22□□□□□ -0.45
VMP1-214ENST00000592106 GPATCH3Q96I76 525 aa12.22□□□□□ -0.45
VMP1-214ENST00000592106 LRRCC1Q9C099 1032 aa12.22□□□□□ -0.45
VMP1-214ENST00000592106 PORCNQ9H237 461 aa12.22□□□□□ -0.45
VMP1-214ENST00000592106 C11orf49Q9H6J7 331 aa12.22□□□□□ -0.45
VMP1-214ENST00000592106 DCP1AQ9NPI6 582 aaPredicted RBP12.22□□□□□ -0.45
VMP1-214ENST00000592106 CENPFP49454 3210 aa12.21□□□□□ -0.45
VMP1-214ENST00000592106 TCRBV5S4A2TA0A5A2 114 aa12.21□□□□□ -0.45
VMP1-214ENST00000592106 SLC15A5A6NIM6 579 aa12.21□□□□□ -0.45
VMP1-214ENST00000592106 MBD4O95243 580 aa12.21□□□□□ -0.45
VMP1-214ENST00000592106 TRIM32Q13049 653 aa12.21□□□□□ -0.45
VMP1-214ENST00000592106 MORN1Q5T089 497 aa12.21□□□□□ -0.45
VMP1-214ENST00000592106 SIRT2Q8IXJ6 389 aa12.21□□□□□ -0.45
VMP1-214ENST00000592106 ACER1Q8TDN7 264 aa12.21□□□□□ -0.45
VMP1-214ENST00000592106 LPAR1Q92633 364 aa12.21□□□□□ -0.45
VMP1-214ENST00000592106 CCDC17Q96LX7 622 aa12.21□□□□□ -0.45
VMP1-214ENST00000592106 HAUS7Q99871 368 aa12.21□□□□□ -0.45
VMP1-214ENST00000592106 TANGO6Q9C0B7 1094 aa12.21□□□□□ -0.45
VMP1-214ENST00000592106 ARMT1Q9H993 441 aa12.21□□□□□ -0.45
VMP1-214ENST00000592106 RBM27Q9P2N5 1060 aaKnown RBP12.21□□□□□ -0.45
VMP1-214ENST00000592106 OGDHLQ9ULD0 1010 aa12.21□□□□□ -0.45
VMP1-214ENST00000592106 MYH8P13535 1937 aa12.2□□□□□ -0.46
VMP1-214ENST00000592106 SPDYE16A6NNV3 312 aaPredicted RBP12.2□□□□□ -0.46
VMP1-214ENST00000592106 MSCO60682 206 aa12.2□□□□□ -0.46
VMP1-214ENST00000592106 PEX10O60683 326 aa12.2□□□□□ -0.46
VMP1-214ENST00000592106 PSEN1P49768 467 aa12.2□□□□□ -0.46
VMP1-214ENST00000592106 ICA1Q05084 483 aa12.2□□□□□ -0.46
VMP1-214ENST00000592106 UBE3CQ15386 1083 aa12.2□□□□□ -0.46
VMP1-214ENST00000592106 Q3C1V9 767 aa12.2□□□□□ -0.46
VMP1-214ENST00000592106 MB21D1Q8N884 522 aa12.2□□□□□ -0.46
VMP1-214ENST00000592106 DIS3LQ8TF46 1054 aaKnown RBP12.2□□□□□ -0.46
VMP1-214ENST00000592106 USP6NLQ92738 828 aa12.2□□□□□ -0.46
VMP1-214ENST00000592106 EDC3Q96F86 508 aaKnown RBP12.2□□□□□ -0.46
VMP1-214ENST00000592106 HOXC10Q9NYD6 342 aa12.2□□□□□ -0.46
VMP1-214ENST00000592106 MYH7P12883 1935 aa12.19□□□□□ -0.46
VMP1-214ENST00000592106 CNMDO75829 334 aa12.19□□□□□ -0.46
VMP1-214ENST00000592106 PTPREP23469 700 aa12.19□□□□□ -0.46
VMP1-214ENST00000592106 GUCY1A2P33402 732 aa12.19□□□□□ -0.46
VMP1-214ENST00000592106 ATP2B2Q01814 1243 aa12.19□□□□□ -0.46
VMP1-214ENST00000592106 CACNB2Q08289 660 aaPredicted RBP12.19□□□□□ -0.46
VMP1-214ENST00000592106 COG2Q14746 738 aa12.19□□□□□ -0.46
VMP1-214ENST00000592106 C7orf61Q8IZ16 206 aa12.19□□□□□ -0.46
VMP1-214ENST00000592106 SLC5A4Q9NY91 659 aa12.19□□□□□ -0.46
VMP1-214ENST00000592106 ARPP21Q9UBL0 812 aaPredicted RBP12.19□□□□□ -0.46
VMP1-214ENST00000592106 BRCA2P51587 3418 aa12.18□□□□□ -0.46
VMP1-214ENST00000592106 CYP2D6P10635 497 aa12.18□□□□□ -0.46
VMP1-214ENST00000592106 GRB14Q14449 540 aa12.18□□□□□ -0.46
VMP1-214ENST00000592106 CCL14Q16627 93 aa12.18□□□□□ -0.46
VMP1-214ENST00000592106 LRRFIP1Q32MZ4 808 aaKnown RBP12.18□□□□□ -0.46
VMP1-214ENST00000592106 SHCBP1Q8NEM2 672 aa12.18□□□□□ -0.46
VMP1-214ENST00000592106 BTBD7Q9P203 1132 aa12.18□□□□□ -0.46
VMP1-214ENST00000592106 SLC4A4Q9Y6R1 1079 aa12.18□□□□□ -0.46
VMP1-214ENST00000592106 MKI67P46013 3256 aaKnown RBP12.18□□□□□ -0.46
VMP1-214ENST00000592106 ZNF236Q9UL36 1845 aa12.18□□□□□ -0.46
VMP1-214ENST00000592106 WDR46O15213 610 aaKnown RBP12.17□□□□□ -0.46
VMP1-214ENST00000592106 STRNO43815 780 aa12.17□□□□□ -0.46
VMP1-214ENST00000592106 FLOT1O75955 427 aa12.17□□□□□ -0.46
VMP1-214ENST00000592106 HOXC6P09630 235 aa12.17□□□□□ -0.46
VMP1-214ENST00000592106 AKR1B1P15121 316 aa12.17□□□□□ -0.46
VMP1-214ENST00000592106 CCND3P30281 292 aaPredicted RBP12.17□□□□□ -0.46
VMP1-214ENST00000592106 C12orf60Q5U649 245 aa12.17□□□□□ -0.46
VMP1-214ENST00000592106 C16orf86Q6ZW13 317 aa12.17□□□□□ -0.46
VMP1-214ENST00000592106 DPP9Q86TI2 863 aa12.17□□□□□ -0.46
VMP1-214ENST00000592106 SLC44A5Q8NCS7 719 aa12.17□□□□□ -0.46
VMP1-214ENST00000592106 DYNLL2Q96FJ2 89 aa12.17□□□□□ -0.46
VMP1-214ENST00000592106 SPATC1LQ9H0A9 340 aa12.17□□□□□ -0.46
VMP1-214ENST00000592106 PRO3102Q9H379 93 aa12.17□□□□□ -0.46
VMP1-214ENST00000592106 VCPKMTQ9H867 229 aa12.17□□□□□ -0.46
VMP1-214ENST00000592106 GOPCQ9HD26 462 aa12.17□□□□□ -0.46
VMP1-214ENST00000592106 ECHDC1Q9NTX5 307 aa12.17□□□□□ -0.46
VMP1-214ENST00000592106 A0A0G2JMZ2 1700 aa12.17□□□□□ -0.46
VMP1-214ENST00000592106 ALPK3Q96L96 1907 aa12.16□□□□□ -0.46
VMP1-214ENST00000592106 A0A1W2PRG0 241 aa12.16□□□□□ -0.46
VMP1-214ENST00000592106 USP17L12C9JPN9 530 aa12.16□□□□□ -0.46
VMP1-214ENST00000592106 USP17L21D6R901 530 aa12.16□□□□□ -0.46
VMP1-214ENST00000592106 PRKAB2O43741 272 aa12.16□□□□□ -0.46
VMP1-214ENST00000592106 CNGA1P29973 690 aa12.16□□□□□ -0.46
VMP1-214ENST00000592106 CDK8P49336 464 aa12.16□□□□□ -0.46
VMP1-214ENST00000592106 PLS1Q14651 629 aa12.16□□□□□ -0.46
VMP1-214ENST00000592106 ASTLQ6HA08 431 aaPredicted RBP12.16□□□□□ -0.46
VMP1-214ENST00000592106 MOV10L1Q9BXT6 1211 aaKnown RBP12.16□□□□□ -0.46
VMP1-214ENST00000592106 MROH8Q9H579 483 aa12.16□□□□□ -0.46
VMP1-214ENST00000592106 KANSL2Q9H9L4 492 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms