RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 PRMT2P55345 433 aa10.93□□□□□ -0.66
DNMT1-223ENST00000591239 CTDSPL2Q05D32 466 aa10.93□□□□□ -0.66
DNMT1-223ENST00000591239 KIAA1755Q5JYT7 1200 aa10.93□□□□□ -0.66
DNMT1-223ENST00000591239 CENPQQ7L2Z9 268 aaPredicted RBP10.93□□□□□ -0.66
DNMT1-223ENST00000591239 SPICE1Q8N0Z3 855 aa10.93□□□□□ -0.66
DNMT1-223ENST00000591239 LPAR1Q92633 364 aa10.93□□□□□ -0.66
DNMT1-223ENST00000591239 VCPKMTQ9H867 229 aa10.93□□□□□ -0.66
DNMT1-223ENST00000591239 TXNRD2Q9NNW7 524 aa10.93□□□□□ -0.66
DNMT1-223ENST00000591239 RBPJLQ9UBG7 517 aa10.93□□□□□ -0.66
DNMT1-223ENST00000591239 MORF4L1Q9UBU8 362 aa10.93□□□□□ -0.66
DNMT1-223ENST00000591239 ANAPC4Q9UJX5 808 aa10.93□□□□□ -0.66
DNMT1-223ENST00000591239 ZMYM6O95789 1325 aa10.92□□□□□ -0.66
DNMT1-223ENST00000591239 IGKV6D-41A0A0C4DH26 115 aa10.92□□□□□ -0.66
DNMT1-223ENST00000591239 TNPO2O14787 897 aaKnown RBP10.92□□□□□ -0.66
DNMT1-223ENST00000591239 PEX10O60683 326 aa10.92□□□□□ -0.66
DNMT1-223ENST00000591239 SLC9C1Q4G0N8 1177 aa10.92□□□□□ -0.66
DNMT1-223ENST00000591239 FAM47AQ5JRC9 791 aa10.92□□□□□ -0.66
DNMT1-223ENST00000591239 POTEEQ6S8J3 1075 aa10.92□□□□□ -0.66
DNMT1-223ENST00000591239 GPRC5AQ8NFJ5 357 aa10.92□□□□□ -0.66
DNMT1-223ENST00000591239 GTF3C2Q8WUA4 911 aaPredicted RBP10.92□□□□□ -0.66
DNMT1-223ENST00000591239 TANGO6Q9C0B7 1094 aa10.92□□□□□ -0.66
DNMT1-223ENST00000591239 GOPCQ9HD26 462 aa10.92□□□□□ -0.66
DNMT1-223ENST00000591239 INCENPQ9NQS7 918 aa10.92□□□□□ -0.66
DNMT1-223ENST00000591239 NYAP2Q9P242 653 aa10.92□□□□□ -0.66
DNMT1-223ENST00000591239 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.92□□□□□ -0.66
DNMT1-223ENST00000591239 MYPNQ86TC9 1320 aa10.91□□□□□ -0.66
DNMT1-223ENST00000591239 TSPY3P0CV98 308 aa10.91□□□□□ -0.66
DNMT1-223ENST00000591239 TSPY8P0CW00 308 aa10.91□□□□□ -0.66
DNMT1-223ENST00000591239 ERVK-9P63128 1117 aa10.91□□□□□ -0.66
DNMT1-223ENST00000591239 ERVK-24P63145 666 aa10.91□□□□□ -0.66
DNMT1-223ENST00000591239 TFAP4Q01664 338 aa10.91□□□□□ -0.66
DNMT1-223ENST00000591239 PRKCZQ05513 592 aa10.91□□□□□ -0.66
DNMT1-223ENST00000591239 COG2Q14746 738 aa10.91□□□□□ -0.66
DNMT1-223ENST00000591239 Q3C1V9 767 aa10.91□□□□□ -0.66
DNMT1-223ENST00000591239 LBX2Q6XYB7 198 aa10.91□□□□□ -0.66
DNMT1-223ENST00000591239 NBPF11Q86T75 865 aa10.91□□□□□ -0.66
DNMT1-223ENST00000591239 NEDD1Q8NHV4 660 aa10.91□□□□□ -0.66
DNMT1-223ENST00000591239 RAET1EQ8TD07 263 aa10.91□□□□□ -0.66
DNMT1-223ENST00000591239 COA7Q96BR5 231 aa10.91□□□□□ -0.66
DNMT1-223ENST00000591239 ARMC5Q96C12 935 aa10.91□□□□□ -0.66
DNMT1-223ENST00000591239 CEP95Q96GE4 821 aa10.91□□□□□ -0.66
DNMT1-223ENST00000591239 PAGR1Q9BTK6 254 aa10.91□□□□□ -0.66
DNMT1-223ENST00000591239 MTMR4Q9NYA4 1195 aa10.91□□□□□ -0.66
DNMT1-223ENST00000591239 HOXC10Q9NYD6 342 aa10.91□□□□□ -0.66
DNMT1-223ENST00000591239 CLIP2Q9UDT6 1046 aa10.91□□□□□ -0.66
DNMT1-223ENST00000591239 GABRQQ9UN88 632 aa10.91□□□□□ -0.66
DNMT1-223ENST00000591239 RABGAP1Q9Y3P9 1069 aa10.91□□□□□ -0.66
DNMT1-223ENST00000591239 TACC3Q9Y6A5 838 aa10.91□□□□□ -0.66
DNMT1-223ENST00000591239 GREB1LQ9C091 1923 aaPredicted RBP10.91□□□□□ -0.66
DNMT1-223ENST00000591239 MGAMO43451 1857 aa10.91□□□□□ -0.66
DNMT1-223ENST00000591239 PLIN4Q96Q06 1357 aa10.9□□□□□ -0.66
DNMT1-223ENST00000591239 TSPY2A6NKD2 308 aa10.9□□□□□ -0.66
DNMT1-223ENST00000591239 SPDYE16A6NNV3 312 aaPredicted RBP10.9□□□□□ -0.66
DNMT1-223ENST00000591239 WDR46O15213 610 aaKnown RBP10.9□□□□□ -0.66
DNMT1-223ENST00000591239 RAD21O60216 631 aa10.9□□□□□ -0.66
DNMT1-223ENST00000591239 CNMDO75829 334 aa10.9□□□□□ -0.66
DNMT1-223ENST00000591239 FLOT1O75955 427 aa10.9□□□□□ -0.66
DNMT1-223ENST00000591239 TTLL1O95922 423 aa10.9□□□□□ -0.66
DNMT1-223ENST00000591239 NEFLP07196 543 aa10.9□□□□□ -0.66
DNMT1-223ENST00000591239 FGRP09769 529 aa10.9□□□□□ -0.66
DNMT1-223ENST00000591239 CHMLP26374 656 aa10.9□□□□□ -0.66
DNMT1-223ENST00000591239 FLT3LGP49771 235 aa10.9□□□□□ -0.66
DNMT1-223ENST00000591239 HAND2P61296 217 aa10.9□□□□□ -0.66
DNMT1-223ENST00000591239 SH3TC2Q8TF17 1288 aa10.9□□□□□ -0.66
DNMT1-223ENST00000591239 MKL1Q969V6 931 aa10.9□□□□□ -0.66
DNMT1-223ENST00000591239 CCDC136Q96JN2 1154 aa10.9□□□□□ -0.66
DNMT1-223ENST00000591239 DSCC1Q9BVC3 393 aa10.9□□□□□ -0.66
DNMT1-223ENST00000591239 TNRC18O15417 2968 aaPredicted RBP10.9□□□□□ -0.66
DNMT1-223ENST00000591239 F5H6K3 240 aa10.89□□□□□ -0.67
DNMT1-223ENST00000591239 ZNF213O14771 459 aa10.89□□□□□ -0.67
DNMT1-223ENST00000591239 ORC4O43929 436 aa10.89□□□□□ -0.67
DNMT1-223ENST00000591239 RANBP6O60518 1105 aaKnown RBP10.89□□□□□ -0.67
DNMT1-223ENST00000591239 MAPK4P31152 587 aa10.89□□□□□ -0.67
DNMT1-223ENST00000591239 GRK4P32298 578 aa10.89□□□□□ -0.67
DNMT1-223ENST00000591239 SOX10P56693 466 aa10.89□□□□□ -0.67
DNMT1-223ENST00000591239 KLRC3Q07444 240 aa10.89□□□□□ -0.67
DNMT1-223ENST00000591239 CCAR1Q8IX12 1150 aaKnown RBP10.89□□□□□ -0.67
DNMT1-223ENST00000591239 RUFY2Q8WXA3 655 aa10.89□□□□□ -0.67
DNMT1-223ENST00000591239 ZNF333Q96JL9 665 aa10.89□□□□□ -0.67
DNMT1-223ENST00000591239 NBPF3Q9H094 633 aa10.89□□□□□ -0.67
DNMT1-223ENST00000591239 PORCNQ9H237 461 aa10.89□□□□□ -0.67
DNMT1-223ENST00000591239 IL25Q9H293 177 aa10.89□□□□□ -0.67
DNMT1-223ENST00000591239 IL17RBQ9NRM6 502 aa10.89□□□□□ -0.67
DNMT1-223ENST00000591239 TOMM22Q9NS69 142 aa10.89□□□□□ -0.67
DNMT1-223ENST00000591239 BTBD7Q9P203 1132 aa10.89□□□□□ -0.67
DNMT1-223ENST00000591239 SYNPO2Q9UMS6 1093 aa10.89□□□□□ -0.67
DNMT1-223ENST00000591239 ADCY3O60266 1144 aa10.88□□□□□ -0.67
DNMT1-223ENST00000591239 NMT2O60551 498 aa10.88□□□□□ -0.67
DNMT1-223ENST00000591239 NDUFB10O96000 172 aa10.88□□□□□ -0.67
DNMT1-223ENST00000591239 PCP11498 1178 aaKnown RBP10.88□□□□□ -0.67
DNMT1-223ENST00000591239 DSG3P32926 999 aa10.88□□□□□ -0.67
DNMT1-223ENST00000591239 RGS19P49795 217 aa10.88□□□□□ -0.67
DNMT1-223ENST00000591239 CCNA1P78396 465 aa10.88□□□□□ -0.67
DNMT1-223ENST00000591239 IRF5Q13568 498 aa10.88□□□□□ -0.67
DNMT1-223ENST00000591239 RRP12Q5JTH9 1297 aaKnown RBP10.88□□□□□ -0.67
DNMT1-223ENST00000591239 PPP4R3BQ5MIZ7 849 aa10.88□□□□□ -0.67
DNMT1-223ENST00000591239 FAM83BQ5T0W9 1011 aa10.88□□□□□ -0.67
DNMT1-223ENST00000591239 AKNAD1Q5T1N1 836 aa10.88□□□□□ -0.67
DNMT1-223ENST00000591239 MFSD6Q6ZSS7 791 aa10.88□□□□□ -0.67
DNMT1-223ENST00000591239 SKAP1Q86WV1 359 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms