RNA–Protein interactions for RNA: ENST00000590953.5

RANBP3-219, Transcript of RAN binding protein 3, humanhuman

TSL 3

Gene RANBP3, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-219ENST00000590953 HMGB1P09429 215 aaKnown RBP11.67□□□□□ -0.54
RANBP3-219ENST00000590953 MCM5P33992 734 aa11.67□□□□□ -0.54
RANBP3-219ENST00000590953 GPAT2Q6NUI2 795 aa11.67□□□□□ -0.54
RANBP3-219ENST00000590953 MB21D2Q8IYB1 491 aaPredicted RBP11.67□□□□□ -0.54
RANBP3-219ENST00000590953 RASEFQ8IZ41 740 aa11.67□□□□□ -0.54
RANBP3-219ENST00000590953 NEK1Q96PY6 1258 aa11.67□□□□□ -0.54
RANBP3-219ENST00000590953 ZSCAN10Q96SZ4 725 aaPredicted RBP11.67□□□□□ -0.54
RANBP3-219ENST00000590953 MTA3Q9BTC8 594 aa11.67□□□□□ -0.54
RANBP3-219ENST00000590953 EMILIN3Q9NT22 766 aa11.67□□□□□ -0.54
RANBP3-219ENST00000590953 WBP1LQ9NX94 342 aa11.67□□□□□ -0.54
RANBP3-219ENST00000590953 SAGE1Q9NXZ1 904 aa11.67□□□□□ -0.54
RANBP3-219ENST00000590953 PNMA3Q9UL41 463 aa11.67□□□□□ -0.54
RANBP3-219ENST00000590953 TNKSO95271 1327 aa11.66□□□□□ -0.54
RANBP3-219ENST00000590953 F5H6K3 240 aa11.66□□□□□ -0.54
RANBP3-219ENST00000590953 PDHXO00330 501 aa11.66□□□□□ -0.54
RANBP3-219ENST00000590953 RAD21O60216 631 aa11.66□□□□□ -0.54
RANBP3-219ENST00000590953 TOP1P11387 765 aaKnown RBP11.66□□□□□ -0.54
RANBP3-219ENST00000590953 VCAM1P19320 739 aa11.66□□□□□ -0.54
RANBP3-219ENST00000590953 OSBPP22059 807 aa11.66□□□□□ -0.54
RANBP3-219ENST00000590953 PSMA5P28066 241 aa11.66□□□□□ -0.54
RANBP3-219ENST00000590953 HOXA7P31268 230 aaPredicted RBP11.66□□□□□ -0.54
RANBP3-219ENST00000590953 KLRC3Q07444 240 aa11.66□□□□□ -0.54
RANBP3-219ENST00000590953 TREML2Q5T2D2 321 aa11.66□□□□□ -0.54
RANBP3-219ENST00000590953 CYB5R4Q7L1T6 521 aa11.66□□□□□ -0.54
RANBP3-219ENST00000590953 LRRC47Q8N1G4 583 aaKnown RBP11.66□□□□□ -0.54
RANBP3-219ENST00000590953 FAM43AQ8N2R8 423 aa11.66□□□□□ -0.54
RANBP3-219ENST00000590953 GMCL1P1Q8NEA9 526 aa11.66□□□□□ -0.54
RANBP3-219ENST00000590953 NKX2-3Q8TAU0 364 aa11.66□□□□□ -0.54
RANBP3-219ENST00000590953 ANKS1AQ92625 1134 aa11.66□□□□□ -0.54
RANBP3-219ENST00000590953 PARK7Q99497 189 aaKnown RBP11.66□□□□□ -0.54
RANBP3-219ENST00000590953 TMEM47Q9BQJ4 181 aa11.66□□□□□ -0.54
RANBP3-219ENST00000590953 ZKSCAN3Q9BRR0 538 aa11.66□□□□□ -0.54
RANBP3-219ENST00000590953 ZFYVE28Q9HCC9 887 aa11.66□□□□□ -0.54
RANBP3-219ENST00000590953 SNX14Q9Y5W7 946 aa11.66□□□□□ -0.54
RANBP3-219ENST00000590953 LOC285556D6RIA3 1793 aa11.66□□□□□ -0.54
RANBP3-219ENST00000590953 MYH4Q9Y623 1939 aa11.65□□□□□ -0.54
RANBP3-219ENST00000590953 USP17L15C9J2P7 530 aa11.65□□□□□ -0.54
RANBP3-219ENST00000590953 USP17L13C9JLJ4 530 aa11.65□□□□□ -0.54
RANBP3-219ENST00000590953 USP17L11C9JVI0 530 aa11.65□□□□□ -0.54
RANBP3-219ENST00000590953 USP17L18D6R9N7 530 aa11.65□□□□□ -0.54
RANBP3-219ENST00000590953 USP17L22D6RA61 530 aa11.65□□□□□ -0.54
RANBP3-219ENST00000590953 USP17L17D6RBQ6 530 aa11.65□□□□□ -0.54
RANBP3-219ENST00000590953 USP17L19D6RCP7 530 aa11.65□□□□□ -0.54
RANBP3-219ENST00000590953 USP17L20D6RJB6 530 aa11.65□□□□□ -0.54
RANBP3-219ENST00000590953 IFIT3O14879 490 aaKnown RBP11.65□□□□□ -0.54
RANBP3-219ENST00000590953 WDR46O15213 610 aaKnown RBP11.65□□□□□ -0.54
RANBP3-219ENST00000590953 PRC1O43663 620 aa11.65□□□□□ -0.54
RANBP3-219ENST00000590953 TRPA1O75762 1119 aa11.65□□□□□ -0.54
RANBP3-219ENST00000590953 SEC24BO95487 1268 aa11.65□□□□□ -0.54
RANBP3-219ENST00000590953 ANAPC15P60006 121 aa11.65□□□□□ -0.54
RANBP3-219ENST00000590953 IRX3P78415 501 aaPredicted RBP11.65□□□□□ -0.54
RANBP3-219ENST00000590953 USP17L24Q0WX57 530 aa11.65□□□□□ -0.54
RANBP3-219ENST00000590953 DGKZQ13574 1117 aa11.65□□□□□ -0.54
RANBP3-219ENST00000590953 WTAPQ15007 396 aa11.65□□□□□ -0.54
RANBP3-219ENST00000590953 TAF1CQ15572 869 aaPredicted RBP11.65□□□□□ -0.54
RANBP3-219ENST00000590953 IFIT1BQ5T764 474 aaKnown RBP11.65□□□□□ -0.54
RANBP3-219ENST00000590953 SLFN13Q68D06 897 aa11.65□□□□□ -0.54
RANBP3-219ENST00000590953 RCSD1Q6JBY9 416 aa11.65□□□□□ -0.54
RANBP3-219ENST00000590953 BLOC1S2Q6QNY1 142 aa11.65□□□□□ -0.54
RANBP3-219ENST00000590953 ENAHQ8N8S7 591 aaPredicted RBP11.65□□□□□ -0.54
RANBP3-219ENST00000590953 TMEM87BQ96K49 555 aa11.65□□□□□ -0.54
RANBP3-219ENST00000590953 CFHR5Q9BXR6 569 aa11.65□□□□□ -0.54
RANBP3-219ENST00000590953 RPAP3Q9H6T3 665 aaPredicted RBP11.65□□□□□ -0.54
RANBP3-219ENST00000590953 KAT14Q9H8E8 782 aa11.65□□□□□ -0.54
RANBP3-219ENST00000590953 UPF2Q9HAU5 1272 aaKnown RBP11.65□□□□□ -0.54
RANBP3-219ENST00000590953 RNF186Q9NXI6 227 aa11.65□□□□□ -0.54
RANBP3-219ENST00000590953 WDR19Q8NEZ3 1342 aa11.64□□□□□ -0.55
RANBP3-219ENST00000590953 NDUFB10O96000 172 aa11.64□□□□□ -0.55
RANBP3-219ENST00000590953 SEC23AQ15436 765 aa11.64□□□□□ -0.55
RANBP3-219ENST00000590953 ADCK5Q3MIX3 580 aa11.64□□□□□ -0.55
RANBP3-219ENST00000590953 TMEM67Q5HYA8 995 aa11.64□□□□□ -0.55
RANBP3-219ENST00000590953 CATSPERGQ6ZRH7 1159 aa11.64□□□□□ -0.55
RANBP3-219ENST00000590953 DHX32Q7L7V1 743 aaKnown RBP11.64□□□□□ -0.55
RANBP3-219ENST00000590953 CHST3Q7LGC8 479 aa11.64□□□□□ -0.55
RANBP3-219ENST00000590953 SPICE1Q8N0Z3 855 aa11.64□□□□□ -0.55
RANBP3-219ENST00000590953 TMTC2Q8N394 836 aa11.64□□□□□ -0.55
RANBP3-219ENST00000590953 GTF3C2Q8WUA4 911 aaPredicted RBP11.64□□□□□ -0.55
RANBP3-219ENST00000590953 GMCL1Q96IK5 515 aa11.64□□□□□ -0.55
RANBP3-219ENST00000590953 JAKMIP1Q96N16 626 aaKnown RBP11.64□□□□□ -0.55
RANBP3-219ENST00000590953 TM6SF1Q9BZW5 370 aa11.64□□□□□ -0.55
RANBP3-219ENST00000590953 BMP3P12645 472 aa11.63□□□□□ -0.55
RANBP3-219ENST00000590953 SLC1A4P43007 532 aa11.63□□□□□ -0.55
RANBP3-219ENST00000590953 ANTXR2P58335 489 aa11.63□□□□□ -0.55
RANBP3-219ENST00000590953 KIAA1755Q5JYT7 1200 aa11.63□□□□□ -0.55
RANBP3-219ENST00000590953 PNMA1Q8ND90 353 aa11.63□□□□□ -0.55
RANBP3-219ENST00000590953 IGDCC4Q8TDY8 1250 aa11.63□□□□□ -0.55
RANBP3-219ENST00000590953 SMCR8Q8TEV9 937 aaPredicted RBP11.63□□□□□ -0.55
RANBP3-219ENST00000590953 DCAF4Q8WV16 495 aa11.63□□□□□ -0.55
RANBP3-219ENST00000590953 TANGO6Q9C0B7 1094 aa11.63□□□□□ -0.55
RANBP3-219ENST00000590953 ASCC2Q9H1I8 757 aaPredicted RBP11.63□□□□□ -0.55
RANBP3-219ENST00000590953 HOXC10Q9NYD6 342 aa11.63□□□□□ -0.55
RANBP3-219ENST00000590953 SH2B2O14492 632 aaPredicted RBP11.62□□□□□ -0.55
RANBP3-219ENST00000590953 TLR2O60603 784 aa11.62□□□□□ -0.55
RANBP3-219ENST00000590953 TBC1D8O95759 1140 aa11.62□□□□□ -0.55
RANBP3-219ENST00000590953 HSPA1AP0DMV8 641 aaKnown RBP11.62□□□□□ -0.55
RANBP3-219ENST00000590953 HSPA1BP0DMV9 641 aaKnown RBP11.62□□□□□ -0.55
RANBP3-219ENST00000590953 CYP2C8P10632 490 aa11.62□□□□□ -0.55
RANBP3-219ENST00000590953 CASTP20810 708 aaKnown RBP11.62□□□□□ -0.55
RANBP3-219ENST00000590953 LIFRP42702 1097 aa11.62□□□□□ -0.55
RANBP3-219ENST00000590953 GCLCP48506 637 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 412.1 ms