RNA–Protein interactions for RNA: ENST00000590887.5

PTBP1-216, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-216ENST00000590887 CLIP2Q9UDT6 1046 aa15.04■□□□□ -0
PTBP1-216ENST00000590887 MYH6P13533 1939 aa15.04■□□□□ -0
PTBP1-216ENST00000590887 PITPNM2Q9BZ72 1349 aa15.03■□□□□ -0
PTBP1-216ENST00000590887 FDPSP14324 419 aaKnown RBP15.03■□□□□ -0
PTBP1-216ENST00000590887 SAMD7Q7Z3H4 446 aa15.03■□□□□ -0
PTBP1-216ENST00000590887 HACL1Q9UJ83 578 aa15.03■□□□□ -0
PTBP1-216ENST00000590887 CNTNAP1P78357 1384 aa15.02■□□□□ -0
PTBP1-216ENST00000590887 PALM3A6NDB9 673 aaPredicted RBP15.02■□□□□ -0
PTBP1-216ENST00000590887 ATP2B2Q01814 1243 aa15.02■□□□□ -0
PTBP1-216ENST00000590887 MAP3K10Q02779 954 aa15.02■□□□□ -0
PTBP1-216ENST00000590887 ICA1Q05084 483 aa15.02■□□□□ -0
PTBP1-216ENST00000590887 SUPT20HL1Q3ZLR7 823 aa15.02■□□□□ -0
PTBP1-216ENST00000590887 CCDC12Q8WUD4 166 aaPredicted RBP15.02■□□□□ -0
PTBP1-216ENST00000590887 DCAF4Q8WV16 495 aa15.02■□□□□ -0
PTBP1-216ENST00000590887 PHKBQ93100 1093 aa15.02■□□□□ -0
PTBP1-216ENST00000590887 IQCA1LA6NCM1 817 aa15.01□□□□□ -0.01
PTBP1-216ENST00000590887 hCG_1984214I3L0E3 225 aa15.01□□□□□ -0.01
PTBP1-216ENST00000590887 ASNSP08243 561 aa15.01□□□□□ -0.01
PTBP1-216ENST00000590887 CDC37L1Q7L3B6 337 aa15.01□□□□□ -0.01
PTBP1-216ENST00000590887 NBPF11Q86T75 865 aa15.01□□□□□ -0.01
PTBP1-216ENST00000590887 ZNF713Q8N859 430 aaPredicted RBP15.01□□□□□ -0.01
PTBP1-216ENST00000590887 CCDC148Q8NFR7 591 aa15.01□□□□□ -0.01
PTBP1-216ENST00000590887 DCPSQ96C86 337 aaKnown RBP15.01□□□□□ -0.01
PTBP1-216ENST00000590887 SPZ1Q9BXG8 430 aa15.01□□□□□ -0.01
PTBP1-216ENST00000590887 TMEM39BQ9GZU3 492 aa15.01□□□□□ -0.01
PTBP1-216ENST00000590887 DEFB129Q9H1M3 183 aa15.01□□□□□ -0.01
PTBP1-216ENST00000590887 SH3GLB2Q9NR46 395 aa15.01□□□□□ -0.01
PTBP1-216ENST00000590887 SEC63Q9UGP8 760 aaKnown RBP15.01□□□□□ -0.01
PTBP1-216ENST00000590887 V9GY48 417 aaPredicted RBP15.01□□□□□ -0.01
PTBP1-216ENST00000590887 MYH4Q9Y623 1939 aa15.01□□□□□ -0.01
PTBP1-216ENST00000590887 KLRF2D3W0D1 207 aa15□□□□□ -0.01
PTBP1-216ENST00000590887 CALML3P27482 149 aa15□□□□□ -0.01
PTBP1-216ENST00000590887 TRAF1Q13077 416 aa15□□□□□ -0.01
PTBP1-216ENST00000590887 KRT40Q6A162 431 aa15□□□□□ -0.01
PTBP1-216ENST00000590887 GALNT17Q6IS24 598 aa15□□□□□ -0.01
PTBP1-216ENST00000590887 USP50Q70EL3 339 aaPredicted RBP15□□□□□ -0.01
PTBP1-216ENST00000590887 CCDC82Q8N4S0 544 aa15□□□□□ -0.01
PTBP1-216ENST00000590887 RRP36Q96EU6 259 aaKnown RBP15□□□□□ -0.01
PTBP1-216ENST00000590887 GNL3Q9BVP2 549 aaKnown RBP eCLIP15□□□□□ -0.01
PTBP1-216ENST00000590887 ZNF341Q9BYN7 854 aa15□□□□□ -0.01
PTBP1-216ENST00000590887 DNAJC18Q9H819 358 aa15□□□□□ -0.01
PTBP1-216ENST00000590887 GOPCQ9HD26 462 aa15□□□□□ -0.01
PTBP1-216ENST00000590887 MAD2L2Q9UI95 211 aa15□□□□□ -0.01
PTBP1-216ENST00000590887 GREB1LQ9C091 1923 aaPredicted RBP15□□□□□ -0.01
PTBP1-216ENST00000590887 SIPA1L1O43166 1804 aa14.99□□□□□ -0.01
PTBP1-216ENST00000590887 CTNND1O60716 968 aaKnown RBP14.99□□□□□ -0.01
PTBP1-216ENST00000590887 DDNO94850 711 aaPredicted RBP14.99□□□□□ -0.01
PTBP1-216ENST00000590887 MBD3O95983 291 aa14.99□□□□□ -0.01
PTBP1-216ENST00000590887 GH2P01242 217 aa14.99□□□□□ -0.01
PTBP1-216ENST00000590887 SCG2P13521 617 aa14.99□□□□□ -0.01
PTBP1-216ENST00000590887 EEF2P13639 858 aaKnown RBP14.99□□□□□ -0.01
PTBP1-216ENST00000590887 CAP2P40123 477 aa14.99□□□□□ -0.01
PTBP1-216ENST00000590887 PFKFB3Q16875 520 aaPredicted RBP14.99□□□□□ -0.01
PTBP1-216ENST00000590887 ANGEL2Q5VTE6 544 aaKnown RBP14.99□□□□□ -0.01
PTBP1-216ENST00000590887 USP48Q86UV5 1035 aa14.99□□□□□ -0.01
PTBP1-216ENST00000590887 SRBD1Q8N5C6 995 aaKnown RBP14.99□□□□□ -0.01
PTBP1-216ENST00000590887 GMCL1P1Q8NEA9 526 aa14.99□□□□□ -0.01
PTBP1-216ENST00000590887 ZC3H15Q8WU90 426 aaKnown RBP14.99□□□□□ -0.01
PTBP1-216ENST00000590887 FOXP1Q9H334 677 aaPredicted RBP14.99□□□□□ -0.01
PTBP1-216ENST00000590887 CNTNAP5Q8WYK1 1306 aa14.98□□□□□ -0.01
PTBP1-216ENST00000590887 GOLGA6L4A6NEF3 574 aa14.98□□□□□ -0.01
PTBP1-216ENST00000590887 GLTPD2A6NH11 291 aa14.98□□□□□ -0.01
PTBP1-216ENST00000590887 PLEKHA8P1O95397 391 aa14.98□□□□□ -0.01
PTBP1-216ENST00000590887 SNHG28P0DPA3 235 aa14.98□□□□□ -0.01
PTBP1-216ENST00000590887 PDHBP11177 359 aa14.98□□□□□ -0.01
PTBP1-216ENST00000590887 SLC1A4P43007 532 aa14.98□□□□□ -0.01
PTBP1-216ENST00000590887 RESTQ13127 1097 aa14.98□□□□□ -0.01
PTBP1-216ENST00000590887 SEPT2Q15019 361 aa14.98□□□□□ -0.01
PTBP1-216ENST00000590887 SLFN13Q68D06 897 aa14.98□□□□□ -0.01
PTBP1-216ENST00000590887 FERMT3Q86UX7 667 aa14.98□□□□□ -0.01
PTBP1-216ENST00000590887 L3MBTL3Q96JM7 780 aaPredicted RBP14.98□□□□□ -0.01
PTBP1-216ENST00000590887 AS3MTQ9HBK9 375 aa14.98□□□□□ -0.01
PTBP1-216ENST00000590887 MTMR7Q9Y216 660 aa14.98□□□□□ -0.01
PTBP1-216ENST00000590887 SHTN1A0MZ66 631 aa14.97□□□□□ -0.01
PTBP1-216ENST00000590887 PRPF40AO75400 957 aaKnown RBP14.97□□□□□ -0.01
PTBP1-216ENST00000590887 GDF11O95390 407 aa14.97□□□□□ -0.01
PTBP1-216ENST00000590887 MMP1P03956 469 aa14.97□□□□□ -0.01
PTBP1-216ENST00000590887 NF2P35240 595 aa14.97□□□□□ -0.01
PTBP1-216ENST00000590887 KRT2P35908 639 aa14.97□□□□□ -0.01
PTBP1-216ENST00000590887 EPS15P42566 896 aa14.97□□□□□ -0.01
PTBP1-216ENST00000590887 FOSBP53539 338 aa14.97□□□□□ -0.01
PTBP1-216ENST00000590887 GUCY1B3Q02153 619 aa14.97□□□□□ -0.01
PTBP1-216ENST00000590887 FUT2Q10981 343 aa14.97□□□□□ -0.01
PTBP1-216ENST00000590887 CCDC96Q2M329 555 aa14.97□□□□□ -0.01
PTBP1-216ENST00000590887 MIGA2Q7L4E1 593 aa14.97□□□□□ -0.01
PTBP1-216ENST00000590887 PNMA8AQ86V59 439 aaPredicted RBP14.97□□□□□ -0.01
PTBP1-216ENST00000590887 SULF1Q8IWU6 871 aa14.97□□□□□ -0.01
PTBP1-216ENST00000590887 LRRC47Q8N1G4 583 aaKnown RBP14.97□□□□□ -0.01
PTBP1-216ENST00000590887 TMEM87AQ8NBN3 555 aa14.97□□□□□ -0.01
PTBP1-216ENST00000590887 SYAP1Q96A49 352 aaPredicted RBP14.97□□□□□ -0.01
PTBP1-216ENST00000590887 GLT8D2Q9H1C3 349 aa14.97□□□□□ -0.01
PTBP1-216ENST00000590887 PGAP2Q9UHJ9 254 aa14.97□□□□□ -0.01
PTBP1-216ENST00000590887 ZBTB21Q9ULJ3 1066 aa14.97□□□□□ -0.01
PTBP1-216ENST00000590887 ELP1O95163 1332 aa14.96□□□□□ -0.01
PTBP1-216ENST00000590887 FAM196BA6NMK8 535 aa14.96□□□□□ -0.01
PTBP1-216ENST00000590887 USP17L5A8MUK1 530 aa14.96□□□□□ -0.01
PTBP1-216ENST00000590887 RAD21O60216 631 aa14.96□□□□□ -0.01
PTBP1-216ENST00000590887 TRAK2O60296 914 aa14.96□□□□□ -0.01
PTBP1-216ENST00000590887 GNA11P29992 359 aa14.96□□□□□ -0.01
PTBP1-216ENST00000590887 NLRP5P59047 1200 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms