RNA–Protein interactions for RNA: ENST00000590325.1

CALR-207, Transcript of calreticulin, humanhuman

TSL 2

Gene CALR, Length 781 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-207ENST00000590325 OSBPP22059 807 aa16.9■□□□□ 0.3
CALR-207ENST00000590325 NOM1Q5C9Z4 860 aaKnown RBP16.9■□□□□ 0.3
CALR-207ENST00000590325 STOX1Q6ZVD7 989 aa16.9■□□□□ 0.3
CALR-207ENST00000590325 SPICE1Q8N0Z3 855 aa16.9■□□□□ 0.3
CALR-207ENST00000590325 ASCC2Q9H1I8 757 aaPredicted RBP16.9■□□□□ 0.3
CALR-207ENST00000590325 GOPCQ9HD26 462 aa16.9■□□□□ 0.3
CALR-207ENST00000590325 ZSWIM5Q9P217 1185 aa16.9■□□□□ 0.3
CALR-207ENST00000590325 PNMA3Q9UL41 463 aa16.9■□□□□ 0.3
CALR-207ENST00000590325 SYNPO2Q9UMS6 1093 aa16.9■□□□□ 0.3
CALR-207ENST00000590325 STX8Q9UNK0 236 aa16.9■□□□□ 0.3
CALR-207ENST00000590325 ADGRA2Q96PE1 1338 aa16.9■□□□□ 0.3
CALR-207ENST00000590325 USP17L15C9J2P7 530 aa16.89■□□□□ 0.29
CALR-207ENST00000590325 USP17L13C9JLJ4 530 aa16.89■□□□□ 0.29
CALR-207ENST00000590325 USP17L11C9JVI0 530 aa16.89■□□□□ 0.29
CALR-207ENST00000590325 USP17L18D6R9N7 530 aa16.89■□□□□ 0.29
CALR-207ENST00000590325 USP17L22D6RA61 530 aa16.89■□□□□ 0.29
CALR-207ENST00000590325 USP17L17D6RBQ6 530 aa16.89■□□□□ 0.29
CALR-207ENST00000590325 USP17L19D6RCP7 530 aa16.89■□□□□ 0.29
CALR-207ENST00000590325 USP17L20D6RJB6 530 aa16.89■□□□□ 0.29
CALR-207ENST00000590325 F5H6K3 240 aa16.89■□□□□ 0.29
CALR-207ENST00000590325 REC8O95072 547 aa16.89■□□□□ 0.29
CALR-207ENST00000590325 KLRC3Q07444 240 aa16.89■□□□□ 0.29
CALR-207ENST00000590325 USP17L24Q0WX57 530 aa16.89■□□□□ 0.29
CALR-207ENST00000590325 TRDNQ13061 729 aa16.89■□□□□ 0.29
CALR-207ENST00000590325 CATSPERGQ6ZRH7 1159 aa16.89■□□□□ 0.29
CALR-207ENST00000590325 LRRC47Q8N1G4 583 aaKnown RBP16.89■□□□□ 0.29
CALR-207ENST00000590325 RPAP3Q9H6T3 665 aaPredicted RBP16.89■□□□□ 0.29
CALR-207ENST00000590325 GREB1LQ9C091 1923 aaPredicted RBP16.89■□□□□ 0.29
CALR-207ENST00000590325 NDUFB10O96000 172 aa16.88■□□□□ 0.29
CALR-207ENST00000590325 IRX3P78415 501 aaPredicted RBP16.88■□□□□ 0.29
CALR-207ENST00000590325 RCSD1Q6JBY9 416 aa16.88■□□□□ 0.29
CALR-207ENST00000590325 C17orf99Q6UX52 265 aa16.88■□□□□ 0.29
CALR-207ENST00000590325 GMCL1P1Q8NEA9 526 aa16.88■□□□□ 0.29
CALR-207ENST00000590325 SMCR8Q8TEV9 937 aaPredicted RBP16.88■□□□□ 0.29
CALR-207ENST00000590325 ZNF296Q8WUU4 475 aaPredicted RBP16.88■□□□□ 0.29
CALR-207ENST00000590325 P2RX7Q99572 595 aaKnown RBP16.88■□□□□ 0.29
CALR-207ENST00000590325 ZKSCAN3Q9BRR0 538 aa16.88■□□□□ 0.29
CALR-207ENST00000590325 PRDM10Q9NQV6 1147 aa16.88■□□□□ 0.29
CALR-207ENST00000590325 CPA4Q9UI42 421 aa16.88■□□□□ 0.29
CALR-207ENST00000590325 LOC285556D6RIA3 1793 aa16.87■□□□□ 0.29
CALR-207ENST00000590325 WDR46O15213 610 aaKnown RBP16.87■□□□□ 0.29
CALR-207ENST00000590325 RAD21O60216 631 aa16.87■□□□□ 0.29
CALR-207ENST00000590325 RNF20Q5VTR2 975 aa16.87■□□□□ 0.29
CALR-207ENST00000590325 CYB5R4Q7L1T6 521 aa16.87■□□□□ 0.29
CALR-207ENST00000590325 IQCA1Q86XH1 822 aa16.87■□□□□ 0.29
CALR-207ENST00000590325 NCOA7Q8NI08 942 aa16.87■□□□□ 0.29
CALR-207ENST00000590325 TTC14Q96N46 770 aa16.87■□□□□ 0.29
CALR-207ENST00000590325 ZSCAN10Q96SZ4 725 aaPredicted RBP16.87■□□□□ 0.29
CALR-207ENST00000590325 PTPRFP10586 1907 aa16.87■□□□□ 0.29
CALR-207ENST00000590325 LAMA4Q16363 1823 aa16.86■□□□□ 0.29
CALR-207ENST00000590325 MYH8P13535 1937 aa16.86■□□□□ 0.29
CALR-207ENST00000590325 FKTNO75072 461 aa16.86■□□□□ 0.29
CALR-207ENST00000590325 BCRP11274 1271 aa16.86■□□□□ 0.29
CALR-207ENST00000590325 TOP1P11387 765 aaKnown RBP16.86■□□□□ 0.29
CALR-207ENST00000590325 HERVK_113P62684 666 aa16.86■□□□□ 0.29
CALR-207ENST00000590325 TSGA10IPQ3SY00 556 aa16.86■□□□□ 0.29
CALR-207ENST00000590325 CCDC178Q5BJE1 867 aa16.86■□□□□ 0.29
CALR-207ENST00000590325 RALYLQ86SE5 291 aaKnown RBP16.86■□□□□ 0.29
CALR-207ENST00000590325 DGKHQ86XP1 1220 aa16.86■□□□□ 0.29
CALR-207ENST00000590325 MB21D2Q8IYB1 491 aaPredicted RBP16.86■□□□□ 0.29
CALR-207ENST00000590325 RASEFQ8IZ41 740 aa16.86■□□□□ 0.29
CALR-207ENST00000590325 ANKS1AQ92625 1134 aa16.86■□□□□ 0.29
CALR-207ENST00000590325 KCNB2Q92953 911 aa16.86■□□□□ 0.29
CALR-207ENST00000590325 NUP88Q99567 741 aaPredicted RBP16.86■□□□□ 0.29
CALR-207ENST00000590325 TMEM47Q9BQJ4 181 aa16.86■□□□□ 0.29
CALR-207ENST00000590325 TANGO6Q9C0B7 1094 aa16.86■□□□□ 0.29
CALR-207ENST00000590325 EPB41L2O43491 1005 aaKnown RBP16.85■□□□□ 0.29
CALR-207ENST00000590325 HSPA4P34932 840 aa16.85■□□□□ 0.29
CALR-207ENST00000590325 GCLCP48506 637 aaPredicted RBP16.85■□□□□ 0.29
CALR-207ENST00000590325 SP3Q02447 781 aa16.85■□□□□ 0.29
CALR-207ENST00000590325 FAM83BQ5T0W9 1011 aa16.85■□□□□ 0.29
CALR-207ENST00000590325 SLFN13Q68D06 897 aa16.85■□□□□ 0.29
CALR-207ENST00000590325 POTEEQ6S8J3 1075 aa16.85■□□□□ 0.29
CALR-207ENST00000590325 ENAHQ8N8S7 591 aaPredicted RBP16.85■□□□□ 0.29
CALR-207ENST00000590325 UBAC1Q9BSL1 405 aa16.85■□□□□ 0.29
CALR-207ENST00000590325 USP26Q9BXU7 913 aa16.85■□□□□ 0.29
CALR-207ENST00000590325 TNKSO95271 1327 aa16.85■□□□□ 0.29
CALR-207ENST00000590325 ZKSCAN1P17029 563 aaPredicted RBP16.84■□□□□ 0.29
CALR-207ENST00000590325 COG2Q14746 738 aa16.84■□□□□ 0.29
CALR-207ENST00000590325 ANKRD13CQ8N6S4 541 aa16.84■□□□□ 0.29
CALR-207ENST00000590325 GMCL1Q96IK5 515 aa16.84■□□□□ 0.29
CALR-207ENST00000590325 HOXC10Q9NYD6 342 aa16.84■□□□□ 0.29
CALR-207ENST00000590325 SPDYE16A6NNV3 312 aaPredicted RBP16.83■□□□□ 0.28
CALR-207ENST00000590325 FLOT1O75955 427 aa16.83■□□□□ 0.28
CALR-207ENST00000590325 MCCP23508 829 aa16.83■□□□□ 0.28
CALR-207ENST00000590325 ANTXR2P58335 489 aa16.83■□□□□ 0.28
CALR-207ENST00000590325 COL9A3Q14050 684 aaPredicted RBP16.83■□□□□ 0.28
CALR-207ENST00000590325 SEC23AQ15436 765 aa16.83■□□□□ 0.28
CALR-207ENST00000590325 LBX2Q6XYB7 198 aa16.83■□□□□ 0.28
CALR-207ENST00000590325 CHST3Q7LGC8 479 aa16.83■□□□□ 0.28
CALR-207ENST00000590325 GTF3C2Q8WUA4 911 aaPredicted RBP16.83■□□□□ 0.28
CALR-207ENST00000590325 TXNRD2Q9NNW7 524 aa16.83■□□□□ 0.28
CALR-207ENST00000590325 FBXO28Q9NVF7 368 aa16.83■□□□□ 0.28
CALR-207ENST00000590325 RBPJLQ9UBG7 517 aa16.83■□□□□ 0.28
CALR-207ENST00000590325 PEX10O60683 326 aa16.82■□□□□ 0.28
CALR-207ENST00000590325 BMP3P12645 472 aa16.82■□□□□ 0.28
CALR-207ENST00000590325 DSG3P32926 999 aa16.82■□□□□ 0.28
CALR-207ENST00000590325 SLC1A4P43007 532 aa16.82■□□□□ 0.28
CALR-207ENST00000590325 LACTBP83111 547 aaPredicted RBP16.82■□□□□ 0.28
CALR-207ENST00000590325 CAP1Q01518 475 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms