RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 SHMT1P34896 483 aa15.65■□□□□ 0.1
PRKCSH-210ENST00000589990 ABCB5Q2M3G0 1257 aa15.65■□□□□ 0.1
PRKCSH-210ENST00000589990 TTC39AQ5SRH9 613 aa15.65■□□□□ 0.1
PRKCSH-210ENST00000589990 LENG1Q96BZ8 264 aaPredicted RBP15.65■□□□□ 0.1
PRKCSH-210ENST00000589990 DNAJB2P25686 324 aa15.64■□□□□ 0.09
PRKCSH-210ENST00000589990 PLCD1P51178 756 aa15.64■□□□□ 0.09
PRKCSH-210ENST00000589990 USP14P54578 494 aa15.64■□□□□ 0.09
PRKCSH-210ENST00000589990 SEPT2Q15019 361 aa15.64■□□□□ 0.09
PRKCSH-210ENST00000589990 CERKLQ49MI3 558 aaPredicted RBP15.64■□□□□ 0.09
PRKCSH-210ENST00000589990 PPM1EQ8WY54 764 aa15.64■□□□□ 0.09
PRKCSH-210ENST00000589990 SPATC1LQ9H0A9 340 aa15.64■□□□□ 0.09
PRKCSH-210ENST00000589990 TLR7Q9NYK1 1049 aaKnown RBP15.64■□□□□ 0.09
PRKCSH-210ENST00000589990 SERPINB13Q9UIV8 391 aa15.64■□□□□ 0.09
PRKCSH-210ENST00000589990 HDAC5Q9UQL6 1122 aa15.64■□□□□ 0.09
PRKCSH-210ENST00000589990 NCOR1O75376 2440 aa15.63■□□□□ 0.09
PRKCSH-210ENST00000589990 PQBP1O60828 265 aaKnown RBP15.63■□□□□ 0.09
PRKCSH-210ENST00000589990 PGK1P00558 417 aa15.63■□□□□ 0.09
PRKCSH-210ENST00000589990 CLTBP09497 229 aa15.63■□□□□ 0.09
PRKCSH-210ENST00000589990 TAL1P17542 331 aaPredicted RBP15.63■□□□□ 0.09
PRKCSH-210ENST00000589990 G3BP1Q13283 466 aaKnown RBP eCLIP15.63■□□□□ 0.091e-6■■□□□ 13.6
PRKCSH-210ENST00000589990 TNNI3KQ59H18 835 aa15.63■□□□□ 0.09
PRKCSH-210ENST00000589990 C1orf53Q5VUE5 145 aa15.63■□□□□ 0.09
PRKCSH-210ENST00000589990 TRMT2AQ8IZ69 625 aaKnown RBP15.63■□□□□ 0.09
PRKCSH-210ENST00000589990 PHF24Q9UPV7 400 aa15.63■□□□□ 0.09
PRKCSH-210ENST00000589990 FPGT-TNNI3KV9GXZ4 949 aa15.63■□□□□ 0.09
PRKCSH-210ENST00000589990 CHD7Q9P2D1 2997 aa15.63■□□□□ 0.09
PRKCSH-210ENST00000589990 ZNFX1Q9P2E3 1918 aaKnown RBP15.62■□□□□ 0.09
PRKCSH-210ENST00000589990 TMEM265A0A087WTH1 108 aa15.62■□□□□ 0.09
PRKCSH-210ENST00000589990 GRXCR1A8MXD5 290 aa15.62■□□□□ 0.09
PRKCSH-210ENST00000589990 KIAA0355O15063 1070 aa15.62■□□□□ 0.09
PRKCSH-210ENST00000589990 GNAI3P08754 354 aa15.62■□□□□ 0.09
PRKCSH-210ENST00000589990 PBX2P40425 430 aa15.62■□□□□ 0.09
PRKCSH-210ENST00000589990 USP5P45974 858 aa15.62■□□□□ 0.09
PRKCSH-210ENST00000589990 ATF7IPQ6VMQ6 1270 aa15.62■□□□□ 0.09
PRKCSH-210ENST00000589990 CLEC10AQ8IUN9 316 aa15.62■□□□□ 0.09
PRKCSH-210ENST00000589990 MAML3Q96JK9 1138 aa15.62■□□□□ 0.09
PRKCSH-210ENST00000589990 EHD4Q9H223 541 aa15.62■□□□□ 0.09
PRKCSH-210ENST00000589990 ZNF576Q9H609 170 aa15.62■□□□□ 0.09
PRKCSH-210ENST00000589990 TACC3Q9Y6A5 838 aa15.62■□□□□ 0.09
PRKCSH-210ENST00000589990 XIRP2A4UGR9 3374 aa15.62■□□□□ 0.09
PRKCSH-210ENST00000589990 STRNO43815 780 aa15.61■□□□□ 0.09
PRKCSH-210ENST00000589990 RAG1P15918 1043 aa15.61■□□□□ 0.09
PRKCSH-210ENST00000589990 PLS1Q14651 629 aa15.61■□□□□ 0.09
PRKCSH-210ENST00000589990 COG2Q14746 738 aa15.61■□□□□ 0.09
PRKCSH-210ENST00000589990 TANGO6Q9C0B7 1094 aa15.61■□□□□ 0.09
PRKCSH-210ENST00000589990 ANTXR1Q9H6X2 564 aa15.61■□□□□ 0.09
PRKCSH-210ENST00000589990 XPNPEP3Q9NQH7 507 aa15.61■□□□□ 0.09
PRKCSH-210ENST00000589990 DBNLQ9UJU6 430 aaKnown RBP15.61■□□□□ 0.09
PRKCSH-210ENST00000589990 PARP14Q460N5 1801 aa15.61■□□□□ 0.09
PRKCSH-210ENST00000589990 PLXNA1Q9UIW2 1896 aa15.61■□□□□ 0.09
PRKCSH-210ENST00000589990 MYO9BQ13459 2157 aa15.6■□□□□ 0.09
PRKCSH-210ENST00000589990 COL11A1P12107 1806 aaPredicted RBP15.6■□□□□ 0.09
PRKCSH-210ENST00000589990 A0A1W2PQ45 241 aaPredicted RBP15.6■□□□□ 0.09
PRKCSH-210ENST00000589990 A0A1W2PQY0 241 aa15.6■□□□□ 0.09
PRKCSH-210ENST00000589990 IDH1O75874 414 aaKnown RBP15.6■□□□□ 0.09
PRKCSH-210ENST00000589990 PGK2P07205 417 aa15.6■□□□□ 0.09
PRKCSH-210ENST00000589990 RARSP54136 660 aaKnown RBP15.6■□□□□ 0.09
PRKCSH-210ENST00000589990 FPGSQ05932 587 aa15.6■□□□□ 0.09
PRKCSH-210ENST00000589990 FAAP100Q0VG06 881 aa15.6■□□□□ 0.09
PRKCSH-210ENST00000589990 CCDC158Q5M9N0 1113 aa15.6■□□□□ 0.09
PRKCSH-210ENST00000589990 C16orf59Q7L2K0 433 aa15.6■□□□□ 0.09
PRKCSH-210ENST00000589990 NCAPG2Q86XI2 1143 aa15.6■□□□□ 0.09
PRKCSH-210ENST00000589990 MAGEB6Q8N7X4 407 aa15.6■□□□□ 0.09
PRKCSH-210ENST00000589990 SHCBP1Q8NEM2 672 aa15.6■□□□□ 0.09
PRKCSH-210ENST00000589990 TIFAQ96CG3 184 aa15.6■□□□□ 0.09
PRKCSH-210ENST00000589990 ATG4CQ96DT6 458 aa15.6■□□□□ 0.09
PRKCSH-210ENST00000589990 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.6■□□□□ 0.095e-19■□□□□ 9.9
PRKCSH-210ENST00000589990 NAV1Q8NEY1 1877 aa15.6■□□□□ 0.09
PRKCSH-210ENST00000589990 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.59■□□□□ 0.09
PRKCSH-210ENST00000589990 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.59■□□□□ 0.09
PRKCSH-210ENST00000589990 GNAI2P04899 355 aa15.59■□□□□ 0.09
PRKCSH-210ENST00000589990 IRX5P78411 483 aaPredicted RBP15.59■□□□□ 0.09
PRKCSH-210ENST00000589990 GABPAQ06546 454 aa15.59■□□□□ 0.09
PRKCSH-210ENST00000589990 ADGRE1Q14246 886 aa15.59■□□□□ 0.09
PRKCSH-210ENST00000589990 SAMD1Q6SPF0 538 aaPredicted RBP15.59■□□□□ 0.09
PRKCSH-210ENST00000589990 SPICE1Q8N0Z3 855 aa15.59■□□□□ 0.09
PRKCSH-210ENST00000589990 SLC44A5Q8NCS7 719 aa15.59■□□□□ 0.09
PRKCSH-210ENST00000589990 CCDC8Q9H0W5 538 aaPredicted RBP15.59■□□□□ 0.09
PRKCSH-210ENST00000589990 PRDM12Q9H4Q4 367 aa15.59■□□□□ 0.09
PRKCSH-210ENST00000589990 CABP5Q9NP86 173 aa15.59■□□□□ 0.09
PRKCSH-210ENST00000589990 TMEM39AQ9NV64 488 aa15.59■□□□□ 0.09
PRKCSH-210ENST00000589990 MPHOSPH10O00566 681 aaKnown RBP15.58■□□□□ 0.08
PRKCSH-210ENST00000589990 DSG3P32926 999 aa15.58■□□□□ 0.08
PRKCSH-210ENST00000589990 CCDC85BQ15834 202 aaPredicted RBP15.58■□□□□ 0.08
PRKCSH-210ENST00000589990 SIAH1Q8IUQ4 282 aa15.58■□□□□ 0.08
PRKCSH-210ENST00000589990 ADAMTS19Q8TE59 1207 aa15.58■□□□□ 0.08
PRKCSH-210ENST00000589990 PBX4Q9BYU1 374 aa15.58■□□□□ 0.08
PRKCSH-210ENST00000589990 GPR108Q9NPR9 543 aa15.58■□□□□ 0.08
PRKCSH-210ENST00000589990 HOXC10Q9NYD6 342 aa15.58■□□□□ 0.08
PRKCSH-210ENST00000589990 SMIM22K7EJ46 135 aa15.57■□□□□ 0.08
PRKCSH-210ENST00000589990 ADAMTS4O75173 837 aa15.57■□□□□ 0.08
PRKCSH-210ENST00000589990 ZNF865P0CJ78 1059 aaPredicted RBP15.57■□□□□ 0.08
PRKCSH-210ENST00000589990 CYP2D6P10635 497 aa15.57■□□□□ 0.08
PRKCSH-210ENST00000589990 RARBP10826 455 aa15.57■□□□□ 0.08
PRKCSH-210ENST00000589990 POLA2Q14181 598 aa15.57■□□□□ 0.08
PRKCSH-210ENST00000589990 TMEM132BQ14DG7 1078 aa15.57■□□□□ 0.08
PRKCSH-210ENST00000589990 TTC6Q86TZ1 520 aa15.57■□□□□ 0.08
PRKCSH-210ENST00000589990 ZNF512BQ96KM6 892 aaPredicted RBP15.57■□□□□ 0.08
PRKCSH-210ENST00000589990 NECAB3Q96P71 396 aaPredicted RBP15.57■□□□□ 0.08
PRKCSH-210ENST00000589990 ASB2Q96Q27 587 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms