RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 KCNMB2Q9Y691 235 aa10.45□□□□□ -0.74
SMAD4-209ENST00000589941 ALPK3Q96L96 1907 aa10.45□□□□□ -0.74
SMAD4-209ENST00000589941 PRAMEF22A3QJZ6 481 aa10.44□□□□□ -0.74
SMAD4-209ENST00000589941 SHISA8B8ZZ34 492 aa10.44□□□□□ -0.74
SMAD4-209ENST00000589941 SOX1O00570 391 aaPredicted RBP10.44□□□□□ -0.74
SMAD4-209ENST00000589941 TBC1D10BQ4KMP7 808 aaPredicted RBP10.44□□□□□ -0.74
SMAD4-209ENST00000589941 SLCO4C1Q6ZQN7 724 aa10.44□□□□□ -0.74
SMAD4-209ENST00000589941 MOB2Q70IA6 237 aa10.44□□□□□ -0.74
SMAD4-209ENST00000589941 BCL2L13Q9BXK5 485 aa10.44□□□□□ -0.74
SMAD4-209ENST00000589941 AVENQ9NQS1 362 aaPredicted RBP10.44□□□□□ -0.74
SMAD4-209ENST00000589941 CNOT7Q9UIV1 285 aaKnown RBP10.44□□□□□ -0.74
SMAD4-209ENST00000589941 ZNRF3Q9ULT6 936 aa10.44□□□□□ -0.74
SMAD4-209ENST00000589941 NIP7Q9Y221 180 aaKnown RBP eCLIP10.44□□□□□ -0.74
SMAD4-209ENST00000589941 BRD1O95696 1058 aa10.43□□□□□ -0.74
SMAD4-209ENST00000589941 ADH6P28332 368 aa10.43□□□□□ -0.74
SMAD4-209ENST00000589941 CAP1Q01518 475 aa10.43□□□□□ -0.74
SMAD4-209ENST00000589941 CCINQ13939 588 aa10.43□□□□□ -0.74
SMAD4-209ENST00000589941 TRIP4Q15650 581 aaPredicted RBP10.43□□□□□ -0.74
SMAD4-209ENST00000589941 KRT25Q7Z3Z0 450 aa10.43□□□□□ -0.74
SMAD4-209ENST00000589941 TTC5Q8N0Z6 440 aa10.43□□□□□ -0.74
SMAD4-209ENST00000589941 GALNT6Q8NCL4 622 aa10.43□□□□□ -0.74
SMAD4-209ENST00000589941 GPR152Q8TDT2 470 aa10.43□□□□□ -0.74
SMAD4-209ENST00000589941 EDARADDQ8WWZ3 215 aa10.43□□□□□ -0.74
SMAD4-209ENST00000589941 CDCA5Q96FF9 252 aa10.43□□□□□ -0.74
SMAD4-209ENST00000589941 TRAIPQ9BWF2 469 aa10.43□□□□□ -0.74
SMAD4-209ENST00000589941 KCNQ3O43525 872 aa10.42□□□□□ -0.74
SMAD4-209ENST00000589941 NPR3P17342 541 aa10.42□□□□□ -0.74
SMAD4-209ENST00000589941 EIF1AXP47813 144 aaKnown RBP10.42□□□□□ -0.74
SMAD4-209ENST00000589941 HLFQ16534 295 aa10.42□□□□□ -0.74
SMAD4-209ENST00000589941 NOM1Q5C9Z4 860 aaKnown RBP10.42□□□□□ -0.74
SMAD4-209ENST00000589941 OTOP1Q7RTM1 612 aa10.42□□□□□ -0.74
SMAD4-209ENST00000589941 ZFATQ9P243 1243 aa10.42□□□□□ -0.74
SMAD4-209ENST00000589941 OTOFQ9HC10 1997 aa10.41□□□□□ -0.74
SMAD4-209ENST00000589941 FKTNO75072 461 aa10.41□□□□□ -0.74
SMAD4-209ENST00000589941 SASH3O75995 380 aa10.41□□□□□ -0.74
SMAD4-209ENST00000589941 EPXP11678 715 aa10.41□□□□□ -0.74
SMAD4-209ENST00000589941 NFKB1P19838 968 aa10.41□□□□□ -0.74
SMAD4-209ENST00000589941 TARSP26639 723 aaKnown RBP10.41□□□□□ -0.74
SMAD4-209ENST00000589941 HOXA10P31260 410 aaPredicted RBP10.41□□□□□ -0.74
SMAD4-209ENST00000589941 MAP3K10Q02779 954 aa10.41□□□□□ -0.74
SMAD4-209ENST00000589941 ECM1Q16610 540 aa10.41□□□□□ -0.74
SMAD4-209ENST00000589941 MTHFSDQ2M296 383 aaKnown RBP10.41□□□□□ -0.74
SMAD4-209ENST00000589941 ZNF790Q6PG37 636 aa10.41□□□□□ -0.74
SMAD4-209ENST00000589941 TPTE2Q6XPS3 522 aa10.41□□□□□ -0.74
SMAD4-209ENST00000589941 RPGRQ92834 1020 aaKnown RBP10.41□□□□□ -0.74
SMAD4-209ENST00000589941 MDFIQ99750 246 aa10.41□□□□□ -0.74
SMAD4-209ENST00000589941 GGA3Q9NZ52 723 aa10.41□□□□□ -0.74
SMAD4-209ENST00000589941 STK17AQ9UEE5 414 aa10.41□□□□□ -0.74
SMAD4-209ENST00000589941 TRIM17Q9Y577 477 aa10.41□□□□□ -0.74
SMAD4-209ENST00000589941 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.41□□□□□ -0.74
SMAD4-209ENST00000589941 PRUNE2Q8WUY3 3088 aa10.4□□□□□ -0.74
SMAD4-209ENST00000589941 KIF7Q2M1P5 1343 aa10.4□□□□□ -0.74
SMAD4-209ENST00000589941 ICMTO60725 284 aa10.4□□□□□ -0.74
SMAD4-209ENST00000589941 SIN3BO75182 1162 aa10.4□□□□□ -0.74
SMAD4-209ENST00000589941 XYLBO75191 536 aa10.4□□□□□ -0.74
SMAD4-209ENST00000589941 IL13P35225 146 aa10.4□□□□□ -0.74
SMAD4-209ENST00000589941 CLEC4GQ6UXB4 293 aa10.4□□□□□ -0.74
SMAD4-209ENST00000589941 PRO3102Q9H379 93 aa10.4□□□□□ -0.74
SMAD4-209ENST00000589941 EGFL7Q9UHF1 273 aa10.4□□□□□ -0.74
SMAD4-209ENST00000589941 ADAMTS8Q9UP79 889 aa10.4□□□□□ -0.74
SMAD4-209ENST00000589941 SCAF8Q9UPN6 1271 aaKnown RBP10.4□□□□□ -0.74
SMAD4-209ENST00000589941 UBN2Q6ZU65 1347 aa10.39□□□□□ -0.75
SMAD4-209ENST00000589941 H3BRB1 525 aa10.39□□□□□ -0.75
SMAD4-209ENST00000589941 HMOX1P09601 288 aa10.39□□□□□ -0.75
SMAD4-209ENST00000589941 PIK3R5Q8WYR1 880 aa10.39□□□□□ -0.75
SMAD4-209ENST00000589941 EDEM1Q92611 657 aa10.39□□□□□ -0.75
SMAD4-209ENST00000589941 ARMC5Q96C12 935 aa10.39□□□□□ -0.75
SMAD4-209ENST00000589941 TUT1Q9H6E5 874 aaKnown RBP10.39□□□□□ -0.75
SMAD4-209ENST00000589941 ZNF652Q9Y2D9 606 aa10.39□□□□□ -0.75
SMAD4-209ENST00000589941 USP16Q9Y5T5 823 aa10.39□□□□□ -0.75
SMAD4-209ENST00000589941 RTL9Q8NET4 1388 aa10.39□□□□□ -0.75
SMAD4-209ENST00000589941 ABCC4O15439 1325 aa10.38□□□□□ -0.75
SMAD4-209ENST00000589941 PSMD14O00487 310 aa10.38□□□□□ -0.75
SMAD4-209ENST00000589941 FAM13AO94988 1023 aa10.38□□□□□ -0.75
SMAD4-209ENST00000589941 KIAA2012Q0VF49 1180 aa10.38□□□□□ -0.75
SMAD4-209ENST00000589941 INTS3Q68E01 1043 aaKnown RBP10.38□□□□□ -0.75
SMAD4-209ENST00000589941 TNFRSF25Q93038 417 aa10.38□□□□□ -0.75
SMAD4-209ENST00000589941 PNMA5Q96PV4 448 aa10.38□□□□□ -0.75
SMAD4-209ENST00000589941 RTFDC1Q9BY42 306 aaPredicted RBP10.38□□□□□ -0.75
SMAD4-209ENST00000589941 C11orf16Q9NQ32 467 aa10.38□□□□□ -0.75
SMAD4-209ENST00000589941 H7C1D1 291 aa10.37□□□□□ -0.75
SMAD4-209ENST00000589941 DNM1Q05193 864 aaKnown RBP10.37□□□□□ -0.75
SMAD4-209ENST00000589941 NEDD1Q8NHV4 660 aa10.37□□□□□ -0.75
SMAD4-209ENST00000589941 DCPSQ96C86 337 aaKnown RBP10.37□□□□□ -0.75
SMAD4-209ENST00000589941 BTBD6Q96KE9 485 aa10.37□□□□□ -0.75
SMAD4-209ENST00000589941 FMNL2Q96PY5 1086 aa10.37□□□□□ -0.75
SMAD4-209ENST00000589941 IGFLR1Q9H665 355 aa10.37□□□□□ -0.75
SMAD4-209ENST00000589941 KCNQ5Q9NR82 932 aa10.37□□□□□ -0.75
SMAD4-209ENST00000589941 FAM13BQ9NYF5 915 aa10.37□□□□□ -0.75
SMAD4-209ENST00000589941 GNEQ9Y223 722 aaKnown RBP10.37□□□□□ -0.75
SMAD4-209ENST00000589941 ATP6V0A2Q9Y487 856 aa10.37□□□□□ -0.75
SMAD4-209ENST00000589941 ELOA3CA0A087WX78 387 aaPredicted RBP10.36□□□□□ -0.75
SMAD4-209ENST00000589941 ELOA3DA6NLF2 546 aaPredicted RBP10.36□□□□□ -0.75
SMAD4-209ENST00000589941 ADARB2-AS1A8MUL3 147 aa10.36□□□□□ -0.75
SMAD4-209ENST00000589941 UBE2Q2LH0YL09 131 aa10.36□□□□□ -0.75
SMAD4-209ENST00000589941 FZD6O60353 706 aa10.36□□□□□ -0.75
SMAD4-209ENST00000589941 PDGFAP04085 211 aa10.36□□□□□ -0.75
SMAD4-209ENST00000589941 RARAP10276 462 aa10.36□□□□□ -0.75
SMAD4-209ENST00000589941 TM4SF4P48230 202 aa10.36□□□□□ -0.75
SMAD4-209ENST00000589941 TBC1D8BQ0IIM8 1120 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms