RNA–Protein interactions for RNA: ENST00000589897.1

TPM4-211, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-211ENST00000589897 DOCK3Q8IZD9 2030 aa9.97□□□□□ -0.81
TPM4-211ENST00000589897 USP17L12C9JPN9 530 aa9.96□□□□□ -0.82
TPM4-211ENST00000589897 USP17L21D6R901 530 aa9.96□□□□□ -0.82
TPM4-211ENST00000589897 GLRX3O76003 335 aaKnown RBP9.96□□□□□ -0.82
TPM4-211ENST00000589897 APPP05067 770 aa9.96□□□□□ -0.82
TPM4-211ENST00000589897 ZFYP08048 801 aaPredicted RBP9.96□□□□□ -0.82
TPM4-211ENST00000589897 CYP2D6P10635 497 aa9.96□□□□□ -0.82
TPM4-211ENST00000589897 MAPK4P31152 587 aa9.96□□□□□ -0.82
TPM4-211ENST00000589897 CCNA1P78396 465 aa9.96□□□□□ -0.82
TPM4-211ENST00000589897 SMAD3P84022 425 aaKnown RBP9.96□□□□□ -0.82
TPM4-211ENST00000589897 SEPT2Q15019 361 aa9.96□□□□□ -0.82
TPM4-211ENST00000589897 WDR78Q5VTH9 848 aa9.96□□□□□ -0.82
TPM4-211ENST00000589897 TSHZ3Q63HK5 1081 aa9.96□□□□□ -0.82
TPM4-211ENST00000589897 TMEM179Q6ZVK1 233 aa9.96□□□□□ -0.82
TPM4-211ENST00000589897 TRMT44Q8IYL2 757 aaKnown RBP9.96□□□□□ -0.82
TPM4-211ENST00000589897 KBTBD3Q8NAB2 608 aa9.96□□□□□ -0.82
TPM4-211ENST00000589897 DYNLL2Q96FJ2 89 aa9.96□□□□□ -0.82
TPM4-211ENST00000589897 CRBNQ96SW2 442 aa9.96□□□□□ -0.82
TPM4-211ENST00000589897 NUDT12Q9BQG2 462 aa9.96□□□□□ -0.82
TPM4-211ENST00000589897 SH2D4AQ9H788 454 aa9.96□□□□□ -0.82
TPM4-211ENST00000589897 ARHGEF10LQ9HCE6 1279 aa9.96□□□□□ -0.82
TPM4-211ENST00000589897 MORF4L1Q9UBU8 362 aa9.96□□□□□ -0.82
TPM4-211ENST00000589897 PCDHB15Q9Y5E8 787 aa9.96□□□□□ -0.82
TPM4-211ENST00000589897 UNC80Q8N2C7 3258 aa9.95□□□□□ -0.82
TPM4-211ENST00000589897 RNF113AO15541 343 aaKnown RBP9.95□□□□□ -0.82
TPM4-211ENST00000589897 RAD21O60216 631 aa9.95□□□□□ -0.82
TPM4-211ENST00000589897 VCAM1P19320 739 aa9.95□□□□□ -0.82
TPM4-211ENST00000589897 ERVK-9P63128 1117 aa9.95□□□□□ -0.82
TPM4-211ENST00000589897 ERVK-24P63145 666 aa9.95□□□□□ -0.82
TPM4-211ENST00000589897 ATP2B2Q01814 1243 aa9.95□□□□□ -0.82
TPM4-211ENST00000589897 GABPAQ06546 454 aa9.95□□□□□ -0.82
TPM4-211ENST00000589897 ANKRD45Q5TZF3 282 aa9.95□□□□□ -0.82
TPM4-211ENST00000589897 C12orf60Q5U649 245 aa9.95□□□□□ -0.82
TPM4-211ENST00000589897 SLC44A5Q8NCS7 719 aa9.95□□□□□ -0.82
TPM4-211ENST00000589897 ACER1Q8TDN7 264 aa9.95□□□□□ -0.82
TPM4-211ENST00000589897 ATXN2LQ8WWM7 1075 aaKnown RBP9.95□□□□□ -0.82
TPM4-211ENST00000589897 MYLIPQ8WY64 445 aa9.95□□□□□ -0.82
TPM4-211ENST00000589897 APPBP2Q92624 585 aa9.95□□□□□ -0.82
TPM4-211ENST00000589897 C12orf42Q96LP6 360 aa9.95□□□□□ -0.82
TPM4-211ENST00000589897 CCDC17Q96LX7 622 aa9.95□□□□□ -0.82
TPM4-211ENST00000589897 FSD1Q9BTV5 496 aa9.95□□□□□ -0.82
TPM4-211ENST00000589897 TANGO6Q9C0B7 1094 aa9.95□□□□□ -0.82
TPM4-211ENST00000589897 PUS7LQ9H0K6 701 aaKnown RBP9.95□□□□□ -0.82
TPM4-211ENST00000589897 RPAP3Q9H6T3 665 aaPredicted RBP9.95□□□□□ -0.82
TPM4-211ENST00000589897 MKNK2Q9HBH9 465 aa9.95□□□□□ -0.82
TPM4-211ENST00000589897 ARPP21Q9UBL0 812 aaPredicted RBP9.95□□□□□ -0.82
TPM4-211ENST00000589897 TTC41PQ6P2S7 1318 aa9.95□□□□□ -0.82
TPM4-211ENST00000589897 DDX60LQ5H9U9 1706 aaKnown RBP9.94□□□□□ -0.82
TPM4-211ENST00000589897 PFASO15067 1338 aa9.94□□□□□ -0.82
TPM4-211ENST00000589897 CYP2D7A0A087X1C5 515 aa9.94□□□□□ -0.82
TPM4-211ENST00000589897 MINDY4BA8MYZ0 360 aa9.94□□□□□ -0.82
TPM4-211ENST00000589897 CHGBP05060 677 aa9.94□□□□□ -0.82
TPM4-211ENST00000589897 COL6A1P12109 1028 aa9.94□□□□□ -0.82
TPM4-211ENST00000589897 GNAT2P19087 354 aa9.94□□□□□ -0.82
TPM4-211ENST00000589897 MX1P20591 662 aa9.94□□□□□ -0.82
TPM4-211ENST00000589897 CYP2B6P20813 491 aa9.94□□□□□ -0.82
TPM4-211ENST00000589897 TDO2P48775 406 aa9.94□□□□□ -0.82
TPM4-211ENST00000589897 CDK8P49336 464 aa9.94□□□□□ -0.82
TPM4-211ENST00000589897 ICA1Q05084 483 aa9.94□□□□□ -0.82
TPM4-211ENST00000589897 LRRC26Q2I0M4 334 aa9.94□□□□□ -0.82
TPM4-211ENST00000589897 SAMD1Q6SPF0 538 aaPredicted RBP9.94□□□□□ -0.82
TPM4-211ENST00000589897 CATSPERGQ6ZRH7 1159 aa9.94□□□□□ -0.82
TPM4-211ENST00000589897 SOCS4Q8WXH5 440 aa9.94□□□□□ -0.82
TPM4-211ENST00000589897 C1QTNF1Q9BXJ1 281 aa9.94□□□□□ -0.82
TPM4-211ENST00000589897 NACAP1Q9BZK3 213 aa9.94□□□□□ -0.82
TPM4-211ENST00000589897 ZNF287Q9HBT7 754 aa9.94□□□□□ -0.82
TPM4-211ENST00000589897 HOXC10Q9NYD6 342 aa9.94□□□□□ -0.82
TPM4-211ENST00000589897 RBPJLQ9UBG7 517 aa9.94□□□□□ -0.82
TPM4-211ENST00000589897 GJD2Q9UKL4 321 aa9.94□□□□□ -0.82
TPM4-211ENST00000589897 RABGAP1Q9Y3P9 1069 aa9.94□□□□□ -0.82
TPM4-211ENST00000589897 IVNS1ABPQ9Y6Y0 642 aa9.94□□□□□ -0.82
TPM4-211ENST00000589897 PEX10O60683 326 aa9.93□□□□□ -0.82
TPM4-211ENST00000589897 XRCC5P13010 732 aaKnown RBP9.93□□□□□ -0.82
TPM4-211ENST00000589897 AKR1B1P15121 316 aa9.93□□□□□ -0.82
TPM4-211ENST00000589897 GUCY1A2P33402 732 aa9.93□□□□□ -0.82
TPM4-211ENST00000589897 RGS2P41220 211 aa9.93□□□□□ -0.82
TPM4-211ENST00000589897 EVX2Q03828 476 aa9.93□□□□□ -0.82
TPM4-211ENST00000589897 COG2Q14746 738 aa9.93□□□□□ -0.82
TPM4-211ENST00000589897 GIMAP6Q6P9H5 292 aa9.93□□□□□ -0.82
TPM4-211ENST00000589897 CTR9Q6PD62 1173 aa9.93□□□□□ -0.82
TPM4-211ENST00000589897 C16orf86Q6ZW13 317 aa9.93□□□□□ -0.82
TPM4-211ENST00000589897 PLEKHH3Q7Z736 793 aa9.93□□□□□ -0.82
TPM4-211ENST00000589897 STK11IPQ8N1F8 1099 aa9.93□□□□□ -0.82
TPM4-211ENST00000589897 STRBPQ96SI9 672 aaKnown RBP9.93□□□□□ -0.82
TPM4-211ENST00000589897 TXNRD2Q9NNW7 524 aa9.93□□□□□ -0.82
TPM4-211ENST00000589897 RAPGEFL1Q9UHV5 662 aa9.93□□□□□ -0.82
TPM4-211ENST00000589897 GPAA1O43292 621 aa9.92□□□□□ -0.82
TPM4-211ENST00000589897 FLOT1O75955 427 aa9.92□□□□□ -0.82
TPM4-211ENST00000589897 SLC3A2P08195 630 aaKnown RBP9.92□□□□□ -0.82
TPM4-211ENST00000589897 ZKSCAN1P17029 563 aaPredicted RBP9.92□□□□□ -0.82
TPM4-211ENST00000589897 AAMPQ13685 434 aa9.92□□□□□ -0.82
TPM4-211ENST00000589897 PLS1Q14651 629 aa9.92□□□□□ -0.82
TPM4-211ENST00000589897 SHHQ15465 462 aa9.92□□□□□ -0.82
TPM4-211ENST00000589897 Q3C1V9 767 aa9.92□□□□□ -0.82
TPM4-211ENST00000589897 MAP3K21Q5TCX8 1036 aa9.92□□□□□ -0.82
TPM4-211ENST00000589897 GPR142Q7Z601 462 aa9.92□□□□□ -0.82
TPM4-211ENST00000589897 ZNF444Q8N0Y2 327 aaPredicted RBP9.92□□□□□ -0.82
TPM4-211ENST00000589897 SPICE1Q8N0Z3 855 aa9.92□□□□□ -0.82
TPM4-211ENST00000589897 IL27Q8NEV9 243 aa9.92□□□□□ -0.82
TPM4-211ENST00000589897 LPAR1Q92633 364 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms