RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 PPARDQ03181 441 aa16.17■□□□□ 0.18
SMARCA4-214ENST00000589677 ZKSCAN3Q9BRR0 538 aa16.17■□□□□ 0.18
SMARCA4-214ENST00000589677 OPHN1O60890 802 aa16.17■□□□□ 0.18
SMARCA4-214ENST00000589677 HSPA1LP34931 641 aa16.17■□□□□ 0.18
SMARCA4-214ENST00000589677 NSFL1CQ9UNZ2 370 aaKnown RBP16.17■□□□□ 0.18
SMARCA4-214ENST00000589677 LSG1Q9H089 658 aaKnown RBP16.16■□□□□ 0.18
SMARCA4-214ENST00000589677 FAM169AQ9Y6X4 670 aa16.16■□□□□ 0.18
SMARCA4-214ENST00000589677 NPATQ14207 1427 aa16.16■□□□□ 0.18
SMARCA4-214ENST00000589677 DTNBO60941 627 aa16.16■□□□□ 0.18
SMARCA4-214ENST00000589677 TNNI2P48788 182 aa16.16■□□□□ 0.18
SMARCA4-214ENST00000589677 GUCY2DQ02846 1103 aa16.16■□□□□ 0.18
SMARCA4-214ENST00000589677 SF3A3Q12874 501 aaKnown RBP eCLIP16.16■□□□□ 0.183e-6■■■■■ 28.1
SMARCA4-214ENST00000589677 LGSNQ5TDP6 509 aa16.16■□□□□ 0.18
SMARCA4-214ENST00000589677 MSANTD4Q8NCY6 345 aa16.16■□□□□ 0.18
SMARCA4-214ENST00000589677 SSH3Q8TE77 659 aa16.16■□□□□ 0.18
SMARCA4-214ENST00000589677 CTTNBP2NLQ9P2B4 639 aa16.16■□□□□ 0.18
SMARCA4-214ENST00000589677 KCNK3O14649 394 aa16.16■□□□□ 0.18
SMARCA4-214ENST00000589677 GNA14O95837 355 aa16.16■□□□□ 0.18
SMARCA4-214ENST00000589677 CNOT10Q9H9A5 744 aaKnown RBP16.16■□□□□ 0.18
SMARCA4-214ENST00000589677 IL13P35225 146 aa16.16■□□□□ 0.18
SMARCA4-214ENST00000589677 LRRC23Q53EV4 343 aaPredicted RBP16.16■□□□□ 0.18
SMARCA4-214ENST00000589677 VSTM4Q8IW00 320 aa16.16■□□□□ 0.18
SMARCA4-214ENST00000589677 FAM207AQ9NSI2 230 aaPredicted RBP16.16■□□□□ 0.18
SMARCA4-214ENST00000589677 RNF14Q9UBS8 474 aa16.16■□□□□ 0.18
SMARCA4-214ENST00000589677 GAS8O95995 478 aa16.15■□□□□ 0.18
SMARCA4-214ENST00000589677 LETM2Q2VYF4 491 aa16.15■□□□□ 0.18
SMARCA4-214ENST00000589677 TCP11Q8WWU5 503 aa16.15■□□□□ 0.18
SMARCA4-214ENST00000589677 DBNDD2Q9BQY9 259 aa16.15■□□□□ 0.18
SMARCA4-214ENST00000589677 CASP14P31944 242 aa16.15■□□□□ 0.18
SMARCA4-214ENST00000589677 NBPF6Q5VWK0 638 aa16.15■□□□□ 0.18
SMARCA4-214ENST00000589677 NBPF4Q96M43 638 aa16.15■□□□□ 0.18
SMARCA4-214ENST00000589677 THEGQ9P2T0 379 aa16.15■□□□□ 0.18
SMARCA4-214ENST00000589677 V9GY48 417 aaPredicted RBP16.15■□□□□ 0.18
SMARCA4-214ENST00000589677 PLEKHA4Q9H4M7 779 aa16.15■□□□□ 0.18
SMARCA4-214ENST00000589677 RCOR1Q9UKL0 485 aa16.15■□□□□ 0.18
SMARCA4-214ENST00000589677 ATP5JP18859 108 aa16.15■□□□□ 0.18
SMARCA4-214ENST00000589677 NNTQ13423 1086 aa16.15■□□□□ 0.18
SMARCA4-214ENST00000589677 KRT28Q7Z3Y7 464 aa16.15■□□□□ 0.18
SMARCA4-214ENST00000589677 NOSTRINQ8IVI9 506 aa16.15■□□□□ 0.18
SMARCA4-214ENST00000589677 PHKBQ93100 1093 aa16.15■□□□□ 0.18
SMARCA4-214ENST00000589677 INTS9Q9NV88 658 aaKnown RBP16.15■□□□□ 0.18
SMARCA4-214ENST00000589677 SBNO1A3KN83 1393 aa16.15■□□□□ 0.18
SMARCA4-214ENST00000589677 NBPF9Q3BBW0 867 aa16.15■□□□□ 0.18
SMARCA4-214ENST00000589677 DPCR1Q3MIW9 517 aa16.15■□□□□ 0.18
SMARCA4-214ENST00000589677 BLZF1Q9H2G9 400 aa16.14■□□□□ 0.17
SMARCA4-214ENST00000589677 EYA2O00167 538 aa16.14■□□□□ 0.17
SMARCA4-214ENST00000589677 PPP6R2O75170 966 aa16.14■□□□□ 0.17
SMARCA4-214ENST00000589677 TRIM6Q9C030 488 aaPredicted RBP16.14■□□□□ 0.17
SMARCA4-214ENST00000589677 COPB1P53618 953 aaKnown RBP16.14■□□□□ 0.17
SMARCA4-214ENST00000589677 SAAL1Q96ER3 474 aa16.14■□□□□ 0.17
SMARCA4-214ENST00000589677 PANX2Q96RD6 677 aa16.14■□□□□ 0.17
SMARCA4-214ENST00000589677 SCOCQ9UIL1 159 aa16.14■□□□□ 0.17
SMARCA4-214ENST00000589677 GPAA1O43292 621 aa16.13■□□□□ 0.17
SMARCA4-214ENST00000589677 MBD4O95243 580 aa16.13■□□□□ 0.17
SMARCA4-214ENST00000589677 LIN9Q5TKA1 542 aa16.13■□□□□ 0.17
SMARCA4-214ENST00000589677 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.13■□□□□ 0.17
SMARCA4-214ENST00000589677 POLR3EQ9NVU0 708 aa16.13■□□□□ 0.17
SMARCA4-214ENST00000589677 COG7P83436 770 aa16.13■□□□□ 0.17
SMARCA4-214ENST00000589677 FAF1Q9UNN5 650 aaPredicted RBP16.13■□□□□ 0.17
SMARCA4-214ENST00000589677 GMNNO75496 209 aa16.13■□□□□ 0.17
SMARCA4-214ENST00000589677 RNASELQ05823 741 aaKnown RBP16.13■□□□□ 0.17
SMARCA4-214ENST00000589677 TAF11Q15544 211 aa16.13■□□□□ 0.17
SMARCA4-214ENST00000589677 DBN1Q16643 649 aa16.13■□□□□ 0.17
SMARCA4-214ENST00000589677 FNBP4Q8N3X1 1017 aaPredicted RBP16.13■□□□□ 0.17
SMARCA4-214ENST00000589677 PPP1R9AQ9ULJ8 1098 aa16.13■□□□□ 0.17
SMARCA4-214ENST00000589677 CEP170Q5SW79 1584 aa16.13■□□□□ 0.17
SMARCA4-214ENST00000589677 CYP2C19P33261 490 aa16.13■□□□□ 0.17
SMARCA4-214ENST00000589677 KLHL29Q96CT2 875 aa16.13■□□□□ 0.17
SMARCA4-214ENST00000589677 RUNDC3BQ96NL0 473 aa16.13■□□□□ 0.17
SMARCA4-214ENST00000589677 MAST1Q9Y2H9 1570 aa16.12■□□□□ 0.17
SMARCA4-214ENST00000589677 GTPBP6O43824 516 aaPredicted RBP16.12■□□□□ 0.17
SMARCA4-214ENST00000589677 RBL2Q08999 1139 aa16.12■□□□□ 0.17
SMARCA4-214ENST00000589677 SLC39A14Q15043 492 aa16.12■□□□□ 0.17
SMARCA4-214ENST00000589677 WDR78Q5VTH9 848 aa16.12■□□□□ 0.17
SMARCA4-214ENST00000589677 CCDC13Q8IYE1 715 aa16.12■□□□□ 0.17
SMARCA4-214ENST00000589677 MRRFQ96E11 262 aaKnown RBP16.12■□□□□ 0.17
SMARCA4-214ENST00000589677 NCAPGQ9BPX3 1015 aa16.12■□□□□ 0.17
SMARCA4-214ENST00000589677 NOP53Q9NZM5 478 aaKnown RBP16.12■□□□□ 0.17
SMARCA4-214ENST00000589677 ABCC1P33527 1531 aa16.12■□□□□ 0.17
SMARCA4-214ENST00000589677 HMGB1P1B2RPK0 211 aaPredicted RBP16.12■□□□□ 0.17
SMARCA4-214ENST00000589677 ZBTB17Q13105 803 aa16.12■□□□□ 0.17
SMARCA4-214ENST00000589677 PDE1CQ14123 709 aaPredicted RBP16.12■□□□□ 0.17
SMARCA4-214ENST00000589677 MAK16Q9BXY0 300 aaKnown RBP16.12■□□□□ 0.17
SMARCA4-214ENST00000589677 PCDHA5Q9Y5H7 936 aa16.12■□□□□ 0.17
SMARCA4-214ENST00000589677 STK24Q9Y6E0 443 aa16.12■□□□□ 0.17
SMARCA4-214ENST00000589677 NR1D1P20393 614 aa16.12■□□□□ 0.17
SMARCA4-214ENST00000589677 ST5P78524 1137 aa16.12■□□□□ 0.17
SMARCA4-214ENST00000589677 PLA2G4DQ86XP0 818 aa16.12■□□□□ 0.17
SMARCA4-214ENST00000589677 RETREG2Q8NC44 543 aa16.12■□□□□ 0.17
SMARCA4-214ENST00000589677 CCDC97Q96F63 343 aaPredicted RBP16.12■□□□□ 0.17
SMARCA4-214ENST00000589677 KCNJ14Q9UNX9 436 aa16.12■□□□□ 0.17
SMARCA4-214ENST00000589677 CLIC4Q9Y696 253 aa16.12■□□□□ 0.17
SMARCA4-214ENST00000589677 SPDYE3A6NKU9 549 aa16.12■□□□□ 0.17
SMARCA4-214ENST00000589677 SLC4A8Q2Y0W8 1093 aa16.12■□□□□ 0.17
SMARCA4-214ENST00000589677 EMBQ6PCB8 327 aa16.12■□□□□ 0.17
SMARCA4-214ENST00000589677 SMC1BQ8NDV3 1235 aa16.12■□□□□ 0.17
SMARCA4-214ENST00000589677 MAP4K1Q92918 833 aa16.12■□□□□ 0.17
SMARCA4-214ENST00000589677 C19orf44Q9H6X5 657 aa16.12■□□□□ 0.17
SMARCA4-214ENST00000589677 MIER3Q7Z3K6 550 aa16.11■□□□□ 0.17
SMARCA4-214ENST00000589677 WHAMMQ8TF30 809 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms