RNA–Protein interactions for RNA: ENST00000589614.5

TREM1-204, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TREM1, Length 772 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-204ENST00000589614 HERVK_113Q902F9 699 aa11.78□□□□□ -0.52
TREM1-204ENST00000589614 TOX2Q96NM4 488 aa11.78□□□□□ -0.52
TREM1-204ENST00000589614 SRCIN1Q9C0H9 1055 aa11.78□□□□□ -0.52
TREM1-204ENST00000589614 GINM1Q9NU53 330 aa11.78□□□□□ -0.52
TREM1-204ENST00000589614 TMEM39AQ9NV64 488 aa11.78□□□□□ -0.52
TREM1-204ENST00000589614 ZDBF2Q9HCK1 2354 aa11.77□□□□□ -0.52
TREM1-204ENST00000589614 CFAP54Q96N23 3096 aa11.77□□□□□ -0.53
TREM1-204ENST00000589614 GPR75-ASB3A0A0A6YYF3 556 aa11.77□□□□□ -0.53
TREM1-204ENST00000589614 CNMDO75829 334 aa11.77□□□□□ -0.53
TREM1-204ENST00000589614 LBX2Q6XYB7 198 aa11.77□□□□□ -0.53
TREM1-204ENST00000589614 ANKRD33Q7Z3H0 272 aa11.77□□□□□ -0.53
TREM1-204ENST00000589614 DZIP1Q86YF9 867 aaKnown RBP11.77□□□□□ -0.53
TREM1-204ENST00000589614 SLC44A5Q8NCS7 719 aa11.77□□□□□ -0.53
TREM1-204ENST00000589614 MSRAQ9UJ68 235 aa11.77□□□□□ -0.53
TREM1-204ENST00000589614 MROH7-TTC4A0A0A0MT08 1334 aa11.77□□□□□ -0.53
TREM1-204ENST00000589614 GRXCR1A8MXD5 290 aa11.76□□□□□ -0.53
TREM1-204ENST00000589614 PRR33A8MZF0 331 aa11.76□□□□□ -0.53
TREM1-204ENST00000589614 TIMP1P01033 207 aa11.76□□□□□ -0.53
TREM1-204ENST00000589614 FAAP100Q0VG06 881 aa11.76□□□□□ -0.53
TREM1-204ENST00000589614 TMEM240Q5SV17 173 aa11.76□□□□□ -0.53
TREM1-204ENST00000589614 WDR78Q5VTH9 848 aa11.76□□□□□ -0.53
TREM1-204ENST00000589614 ANO1Q5XXA6 986 aa11.76□□□□□ -0.53
TREM1-204ENST00000589614 MFSD5Q6N075 450 aa11.76□□□□□ -0.53
TREM1-204ENST00000589614 ANKRD44Q8N8A2 993 aa11.76□□□□□ -0.53
TREM1-204ENST00000589614 SLC28A3Q9HAS3 691 aa11.76□□□□□ -0.53
TREM1-204ENST00000589614 COG5Q9UP83 839 aa11.76□□□□□ -0.53
TREM1-204ENST00000589614 NDUFB9Q9Y6M9 179 aa11.76□□□□□ -0.53
TREM1-204ENST00000589614 PDS5AQ29RF7 1337 aaKnown RBP11.76□□□□□ -0.53
TREM1-204ENST00000589614 ZNFX1Q9P2E3 1918 aaKnown RBP11.76□□□□□ -0.53
TREM1-204ENST00000589614 PI4K2BG5E9Z4 385 aa11.75□□□□□ -0.53
TREM1-204ENST00000589614 SMIM22K7EJ46 135 aa11.75□□□□□ -0.53
TREM1-204ENST00000589614 EYA2O00167 538 aa11.75□□□□□ -0.53
TREM1-204ENST00000589614 STRNO43815 780 aa11.75□□□□□ -0.53
TREM1-204ENST00000589614 PQBP1O60828 265 aaKnown RBP11.75□□□□□ -0.53
TREM1-204ENST00000589614 VAMP4O75379 141 aa11.75□□□□□ -0.53
TREM1-204ENST00000589614 PPIGQ13427 754 aaKnown RBP eCLIP11.75□□□□□ -0.53
TREM1-204ENST00000589614 CCDC27Q2M243 656 aa11.75□□□□□ -0.53
TREM1-204ENST00000589614 FAM47AQ5JRC9 791 aa11.75□□□□□ -0.53
TREM1-204ENST00000589614 SPTY2D1Q68D10 685 aaPredicted RBP11.75□□□□□ -0.53
TREM1-204ENST00000589614 PSRC1Q6PGN9 363 aaPredicted RBP11.75□□□□□ -0.53
TREM1-204ENST00000589614 C16orf59Q7L2K0 433 aa11.75□□□□□ -0.53
TREM1-204ENST00000589614 KLHDC4Q8TBB5 520 aa11.75□□□□□ -0.53
TREM1-204ENST00000589614 C12orf42Q96LP6 360 aa11.75□□□□□ -0.53
TREM1-204ENST00000589614 EMILIN3Q9NT22 766 aa11.75□□□□□ -0.53
TREM1-204ENST00000589614 PI4KBQ9UBF8 816 aa11.75□□□□□ -0.53
TREM1-204ENST00000589614 IL16Q14005 1332 aa11.75□□□□□ -0.53
TREM1-204ENST00000589614 ZNF318Q5VUA4 2279 aa11.74□□□□□ -0.53
TREM1-204ENST00000589614 DCDC2CA8MYV0 355 aa11.74□□□□□ -0.53
TREM1-204ENST00000589614 USP17L15C9J2P7 530 aa11.74□□□□□ -0.53
TREM1-204ENST00000589614 USP17L13C9JLJ4 530 aa11.74□□□□□ -0.53
TREM1-204ENST00000589614 USP17L11C9JVI0 530 aa11.74□□□□□ -0.53
TREM1-204ENST00000589614 USP17L18D6R9N7 530 aa11.74□□□□□ -0.53
TREM1-204ENST00000589614 USP17L22D6RA61 530 aa11.74□□□□□ -0.53
TREM1-204ENST00000589614 USP17L17D6RBQ6 530 aa11.74□□□□□ -0.53
TREM1-204ENST00000589614 USP17L19D6RCP7 530 aa11.74□□□□□ -0.53
TREM1-204ENST00000589614 USP17L20D6RJB6 530 aa11.74□□□□□ -0.53
TREM1-204ENST00000589614 TLL1O43897 1013 aa11.74□□□□□ -0.53
TREM1-204ENST00000589614 POU3F3P20264 500 aaPredicted RBP11.74□□□□□ -0.53
TREM1-204ENST00000589614 USP17L24Q0WX57 530 aa11.74□□□□□ -0.53
TREM1-204ENST00000589614 USP17L2Q6R6M4 530 aa11.74□□□□□ -0.53
TREM1-204ENST00000589614 RNF180Q86T96 592 aa11.74□□□□□ -0.53
TREM1-204ENST00000589614 DPP9Q86TI2 863 aa11.74□□□□□ -0.53
TREM1-204ENST00000589614 KCNH6Q9H252 994 aa11.74□□□□□ -0.53
TREM1-204ENST00000589614 DHX36Q9H2U1 1008 aaKnown RBP11.74□□□□□ -0.53
TREM1-204ENST00000589614 ABCF2Q9UG63 623 aa11.74□□□□□ -0.53
TREM1-204ENST00000589614 TBX21Q9UL17 535 aa11.74□□□□□ -0.53
TREM1-204ENST00000589614 SPTBN4Q9H254 2564 aa11.74□□□□□ -0.53
TREM1-204ENST00000589614 A0A1W2PQ45 241 aaPredicted RBP11.73□□□□□ -0.53
TREM1-204ENST00000589614 A0A1W2PQY0 241 aa11.73□□□□□ -0.53
TREM1-204ENST00000589614 PHKA1P46020 1223 aa11.73□□□□□ -0.53
TREM1-204ENST00000589614 JAG1P78504 1218 aa11.73□□□□□ -0.53
TREM1-204ENST00000589614 NHLH1Q02575 133 aa11.73□□□□□ -0.53
TREM1-204ENST00000589614 ATP2B3Q16720 1220 aa11.73□□□□□ -0.53
TREM1-204ENST00000589614 FOCADQ5VW36 1801 aa11.73□□□□□ -0.53
TREM1-204ENST00000589614 METTL16Q86W50 562 aaKnown RBP11.73□□□□□ -0.53
TREM1-204ENST00000589614 KHSRPQ92945 711 aaKnown RBP eCLIP11.73□□□□□ -0.53
TREM1-204ENST00000589614 ZNF521Q96K83 1311 aa11.73□□□□□ -0.53
TREM1-204ENST00000589614 CDK5RAP2Q96SN8 1893 aa11.73□□□□□ -0.53
TREM1-204ENST00000589614 XPNPEP3Q9NQH7 507 aa11.73□□□□□ -0.53
TREM1-204ENST00000589614 GPHNQ9NQX3 736 aaPredicted RBP11.73□□□□□ -0.53
TREM1-204ENST00000589614 SLC5A4Q9NY91 659 aa11.73□□□□□ -0.53
TREM1-204ENST00000589614 NRBP1Q9UHY1 535 aa11.73□□□□□ -0.53
TREM1-204ENST00000589614 ROBO3Q96MS0 1386 aa11.72□□□□□ -0.53
TREM1-204ENST00000589614 FAM86C2PA6NEL3 165 aa11.72□□□□□ -0.53
TREM1-204ENST00000589614 RARBP10826 455 aa11.72□□□□□ -0.53
TREM1-204ENST00000589614 ADORA2AP29274 412 aa11.72□□□□□ -0.53
TREM1-204ENST00000589614 TIE1P35590 1138 aa11.72□□□□□ -0.53
TREM1-204ENST00000589614 MLLT3P42568 568 aaPredicted RBP11.72□□□□□ -0.53
TREM1-204ENST00000589614 MECOMQ03112 1051 aa11.72□□□□□ -0.53
TREM1-204ENST00000589614 SLC4A10Q6U841 1118 aa11.72□□□□□ -0.53
TREM1-204ENST00000589614 CATSPERGQ6ZRH7 1159 aa11.72□□□□□ -0.53
TREM1-204ENST00000589614 ATG9AQ7Z3C6 839 aa11.72□□□□□ -0.53
TREM1-204ENST00000589614 TMEM199Q8N511 208 aa11.72□□□□□ -0.53
TREM1-204ENST00000589614 MTIF3Q9H2K0 278 aaKnown RBP11.72□□□□□ -0.53
TREM1-204ENST00000589614 NKX2-4Q9H2Z4 354 aa11.72□□□□□ -0.53
TREM1-204ENST00000589614 BTBD7Q9P203 1132 aa11.72□□□□□ -0.53
TREM1-204ENST00000589614 ZBTB21Q9ULJ3 1066 aa11.72□□□□□ -0.53
TREM1-204ENST00000589614 TRIOO75962 3097 aa11.72□□□□□ -0.53
TREM1-204ENST00000589614 MROH7Q68CQ1 1323 aa11.71□□□□□ -0.53
TREM1-204ENST00000589614 FANCIQ9NVI1 1328 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms