RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 SPDYE16A6NNV3 312 aaPredicted RBP7.61□□□□□ -1.19
VPS25-204ENST00000589577 DCDC2CA8MYV0 355 aa7.61□□□□□ -1.19
VPS25-204ENST00000589577 ST18O60284 1047 aa7.61□□□□□ -1.19
VPS25-204ENST00000589577 ADAMTS4O75173 837 aa7.61□□□□□ -1.19
VPS25-204ENST00000589577 ARHGEF15O94989 841 aa7.61□□□□□ -1.19
VPS25-204ENST00000589577 ASNSP08243 561 aa7.61□□□□□ -1.19
VPS25-204ENST00000589577 SLC5A1P13866 664 aa7.61□□□□□ -1.19
VPS25-204ENST00000589577 PHKA1P46020 1223 aa7.61□□□□□ -1.19
VPS25-204ENST00000589577 FOXK2Q01167 660 aa7.61□□□□□ -1.19
VPS25-204ENST00000589577 MAPK8IP2Q13387 824 aaPredicted RBP7.61□□□□□ -1.19
VPS25-204ENST00000589577 WDR43Q15061 677 aaKnown RBP eCLIP7.61□□□□□ -1.19
VPS25-204ENST00000589577 FAM178BQ8IXR5 827 aa7.61□□□□□ -1.19
VPS25-204ENST00000589577 LPIN2Q92539 896 aa7.61□□□□□ -1.19
VPS25-204ENST00000589577 HLA-CQ95604 372 aa7.61□□□□□ -1.19
VPS25-204ENST00000589577 VWCEQ96DN2 955 aa7.61□□□□□ -1.19
VPS25-204ENST00000589577 C12orf42Q96LP6 360 aa7.61□□□□□ -1.19
VPS25-204ENST00000589577 PRKRIP1Q9H875 184 aaPredicted RBP7.61□□□□□ -1.19
VPS25-204ENST00000589577 C9orf78Q9NZ63 289 aaPredicted RBP7.61□□□□□ -1.19
VPS25-204ENST00000589577 HERC5Q9UII4 1024 aaKnown RBP7.61□□□□□ -1.19
VPS25-204ENST00000589577 ZBTB21Q9ULJ3 1066 aa7.61□□□□□ -1.19
VPS25-204ENST00000589577 IVNS1ABPQ9Y6Y0 642 aa7.61□□□□□ -1.19
VPS25-204ENST00000589577 PLXNA3P51805 1871 aa7.61□□□□□ -1.19
VPS25-204ENST00000589577 DNAH14Q0VDD8 3507 aa7.61□□□□□ -1.19
VPS25-204ENST00000589577 EPG5Q9HCE0 2579 aa7.61□□□□□ -1.19
VPS25-204ENST00000589577 TECTAO75443 2155 aa7.6□□□□□ -1.19
VPS25-204ENST00000589577 CACNA1HO95180 2353 aa7.6□□□□□ -1.19
VPS25-204ENST00000589577 ZBTB22O15209 634 aa7.6□□□□□ -1.19
VPS25-204ENST00000589577 GDF11O95390 407 aa7.6□□□□□ -1.19
VPS25-204ENST00000589577 RARBP10826 455 aa7.6□□□□□ -1.19
VPS25-204ENST00000589577 TAL1P17542 331 aaPredicted RBP7.6□□□□□ -1.19
VPS25-204ENST00000589577 CDK7P50613 346 aa7.6□□□□□ -1.19
VPS25-204ENST00000589577 ACLYP53396 1101 aa7.6□□□□□ -1.19
VPS25-204ENST00000589577 IRX5P78411 483 aaPredicted RBP7.6□□□□□ -1.19
VPS25-204ENST00000589577 RASGRF1Q13972 1273 aa7.6□□□□□ -1.19
VPS25-204ENST00000589577 CCSAPQ6IQ19 270 aaPredicted RBP7.6□□□□□ -1.19
VPS25-204ENST00000589577 CCDC174Q6PII3 467 aa7.6□□□□□ -1.19
VPS25-204ENST00000589577 CATSPERGQ6ZRH7 1159 aa7.6□□□□□ -1.19
VPS25-204ENST00000589577 OTOP2Q7RTS6 562 aa7.6□□□□□ -1.19
VPS25-204ENST00000589577 ATG9AQ7Z3C6 839 aa7.6□□□□□ -1.19
VPS25-204ENST00000589577 RNF180Q86T96 592 aa7.6□□□□□ -1.19
VPS25-204ENST00000589577 DPP9Q86TI2 863 aa7.6□□□□□ -1.19
VPS25-204ENST00000589577 DZIP1Q86YF9 867 aaKnown RBP7.6□□□□□ -1.19
VPS25-204ENST00000589577 GJD3Q8N144 294 aa7.6□□□□□ -1.19
VPS25-204ENST00000589577 TMEM199Q8N511 208 aa7.6□□□□□ -1.19
VPS25-204ENST00000589577 MAML3Q96JK9 1138 aa7.6□□□□□ -1.19
VPS25-204ENST00000589577 MOV10L1Q9BXT6 1211 aaKnown RBP7.6□□□□□ -1.19
VPS25-204ENST00000589577 PPP1R12CQ9BZL4 782 aa7.6□□□□□ -1.19
VPS25-204ENST00000589577 CERS4Q9HA82 394 aa7.6□□□□□ -1.19
VPS25-204ENST00000589577 IL23AQ9NPF7 189 aa7.6□□□□□ -1.19
VPS25-204ENST00000589577 STARD7Q9NQZ5 370 aa7.6□□□□□ -1.19
VPS25-204ENST00000589577 PCDHA11Q9Y5I1 949 aa7.6□□□□□ -1.19
VPS25-204ENST00000589577 MCM3APO60318 1980 aa7.6□□□□□ -1.19
VPS25-204ENST00000589577 MYO5AQ9Y4I1 1855 aaKnown RBP7.6□□□□□ -1.19
VPS25-204ENST00000589577 UMODL1Q5DID0 1318 aa7.59□□□□□ -1.19
VPS25-204ENST00000589577 SYNRGQ9UMZ2 1314 aa7.59□□□□□ -1.19
VPS25-204ENST00000589577 MYH1P12882 1939 aa7.59□□□□□ -1.19
VPS25-204ENST00000589577 MYADML2A6NDP7 307 aa7.59□□□□□ -1.19
VPS25-204ENST00000589577 USP17L15C9J2P7 530 aa7.59□□□□□ -1.19
VPS25-204ENST00000589577 USP17L13C9JLJ4 530 aa7.59□□□□□ -1.19
VPS25-204ENST00000589577 USP17L11C9JVI0 530 aa7.59□□□□□ -1.19
VPS25-204ENST00000589577 USP17L18D6R9N7 530 aa7.59□□□□□ -1.19
VPS25-204ENST00000589577 USP17L22D6RA61 530 aa7.59□□□□□ -1.19
VPS25-204ENST00000589577 USP17L17D6RBQ6 530 aa7.59□□□□□ -1.19
VPS25-204ENST00000589577 USP17L19D6RCP7 530 aa7.59□□□□□ -1.19
VPS25-204ENST00000589577 USP17L20D6RJB6 530 aa7.59□□□□□ -1.19
VPS25-204ENST00000589577 SEMA3EO15041 775 aa7.59□□□□□ -1.19
VPS25-204ENST00000589577 LPXNO60711 386 aa7.59□□□□□ -1.19
VPS25-204ENST00000589577 ALDH1L1O75891 902 aa7.59□□□□□ -1.19
VPS25-204ENST00000589577 CA3P07451 260 aa7.59□□□□□ -1.19
VPS25-204ENST00000589577 VCAM1P19320 739 aa7.59□□□□□ -1.19
VPS25-204ENST00000589577 CYP2C18P33260 490 aa7.59□□□□□ -1.19
VPS25-204ENST00000589577 RFX5P48382 616 aaPredicted RBP7.59□□□□□ -1.19
VPS25-204ENST00000589577 MECOMQ03112 1051 aa7.59□□□□□ -1.19
VPS25-204ENST00000589577 USP17L24Q0WX57 530 aa7.59□□□□□ -1.19
VPS25-204ENST00000589577 ZYXQ15942 572 aaKnown RBP7.59□□□□□ -1.19
VPS25-204ENST00000589577 USP17L2Q6R6M4 530 aa7.59□□□□□ -1.19
VPS25-204ENST00000589577 HFE2Q6ZVN8 426 aa7.59□□□□□ -1.19
VPS25-204ENST00000589577 SPRED2Q7Z698 418 aa7.59□□□□□ -1.19
VPS25-204ENST00000589577 METTL16Q86W50 562 aaKnown RBP7.59□□□□□ -1.19
VPS25-204ENST00000589577 FAM126BQ8IXS8 530 aa7.59□□□□□ -1.19
VPS25-204ENST00000589577 PRSS33Q8NF86 280 aa7.59□□□□□ -1.19
VPS25-204ENST00000589577 DENND2AQ9ULE3 1009 aa7.59□□□□□ -1.19
VPS25-204ENST00000589577 CFAP47Q6ZTR5 3102 aa7.58□□□□□ -1.2
VPS25-204ENST00000589577 PDS5AQ29RF7 1337 aaKnown RBP7.58□□□□□ -1.2
VPS25-204ENST00000589577 POTEB3A0JP26 581 aa7.58□□□□□ -1.2
VPS25-204ENST00000589577 EYA2O00167 538 aa7.58□□□□□ -1.2
VPS25-204ENST00000589577 APBB1O00213 710 aa7.58□□□□□ -1.2
VPS25-204ENST00000589577 STRNO43815 780 aa7.58□□□□□ -1.2
VPS25-204ENST00000589577 GTPBP6O43824 516 aaPredicted RBP7.58□□□□□ -1.2
VPS25-204ENST00000589577 VAMP4O75379 141 aa7.58□□□□□ -1.2
VPS25-204ENST00000589577 FGBP02675 491 aa7.58□□□□□ -1.2
VPS25-204ENST00000589577 ZNF865P0CJ78 1059 aaPredicted RBP7.58□□□□□ -1.2
VPS25-204ENST00000589577 ERCC3P19447 782 aa7.58□□□□□ -1.2
VPS25-204ENST00000589577 ADORA1P30542 326 aa7.58□□□□□ -1.2
VPS25-204ENST00000589577 ATP2B3Q16720 1220 aa7.58□□□□□ -1.2
VPS25-204ENST00000589577 CSPP1Q1MSJ5 1256 aa7.58□□□□□ -1.2
VPS25-204ENST00000589577 POTEBQ6S5H4 581 aa7.58□□□□□ -1.2
VPS25-204ENST00000589577 KLHDC9Q8NEP7 349 aa7.58□□□□□ -1.2
VPS25-204ENST00000589577 TSEN34Q9BSV6 310 aaKnown RBP7.58□□□□□ -1.2
VPS25-204ENST00000589577 PI4KBQ9UBF8 816 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms