RNA–Protein interactions for RNA: ENST00000589419.1

CCBE1-204, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 4

Gene CCBE1, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-204ENST00000589419 FUT2Q10981 343 aa16.09■□□□□ 0.17
CCBE1-204ENST00000589419 PKP1Q13835 747 aa16.09■□□□□ 0.17
CCBE1-204ENST00000589419 RRP1BQ14684 758 aaKnown RBP16.09■□□□□ 0.17
CCBE1-204ENST00000589419 SEPT2Q15019 361 aa16.09■□□□□ 0.17
CCBE1-204ENST00000589419 SUPT20HL1Q3ZLR7 823 aa16.09■□□□□ 0.17
CCBE1-204ENST00000589419 ASPRV1Q53RT3 343 aa16.09■□□□□ 0.17
CCBE1-204ENST00000589419 PNMA8AQ86V59 439 aaPredicted RBP16.09■□□□□ 0.17
CCBE1-204ENST00000589419 SULF1Q8IWU6 871 aa16.09■□□□□ 0.17
CCBE1-204ENST00000589419 LRRC47Q8N1G4 583 aaKnown RBP16.09■□□□□ 0.17
CCBE1-204ENST00000589419 GMCL1P1Q8NEA9 526 aa16.09■□□□□ 0.17
CCBE1-204ENST00000589419 TAF1DQ9H5J8 278 aaPredicted RBP16.09■□□□□ 0.17
CCBE1-204ENST00000589419 CLIP2Q9UDT6 1046 aa16.09■□□□□ 0.17
CCBE1-204ENST00000589419 MTMR6Q9Y217 621 aa16.09■□□□□ 0.17
CCBE1-204ENST00000589419 ZDHHC9Q9Y397 364 aa16.09■□□□□ 0.17
CCBE1-204ENST00000589419 CNTNAP5Q8WYK1 1306 aa16.09■□□□□ 0.17
CCBE1-204ENST00000589419 PHF20L1A8MW92 1017 aa16.08■□□□□ 0.16
CCBE1-204ENST00000589419 PRPF3O43395 683 aaKnown RBP16.08■□□□□ 0.16
CCBE1-204ENST00000589419 PARP1P09874 1014 aaKnown RBP16.08■□□□□ 0.16
CCBE1-204ENST00000589419 PDHBP11177 359 aa16.08■□□□□ 0.16
CCBE1-204ENST00000589419 EEF2P13639 858 aaKnown RBP16.08■□□□□ 0.16
CCBE1-204ENST00000589419 NBPF12Q5TAG4 269 aaPredicted RBP16.08■□□□□ 0.16
CCBE1-204ENST00000589419 CLEC17AQ6ZS10 378 aa16.08■□□□□ 0.16
CCBE1-204ENST00000589419 MIGA2Q7L4E1 593 aa16.08■□□□□ 0.16
CCBE1-204ENST00000589419 TNPO1Q92973 898 aaKnown RBP16.08■□□□□ 0.16
CCBE1-204ENST00000589419 SLC26A6Q9BXS9 759 aa16.08■□□□□ 0.16
CCBE1-204ENST00000589419 SH2D4AQ9H788 454 aa16.08■□□□□ 0.16
CCBE1-204ENST00000589419 ARHGEF10LQ9HCE6 1279 aa16.08■□□□□ 0.16
CCBE1-204ENST00000589419 MAD2L2Q9UI95 211 aa16.08■□□□□ 0.16
CCBE1-204ENST00000589419 ZNF112Q9UJU3 913 aa16.08■□□□□ 0.16
CCBE1-204ENST00000589419 H3BQV1 296 aa16.07■□□□□ 0.16
CCBE1-204ENST00000589419 CTNND1O60716 968 aaKnown RBP16.07■□□□□ 0.16
CCBE1-204ENST00000589419 PLEKHA8P1O95397 391 aa16.07■□□□□ 0.16
CCBE1-204ENST00000589419 AKAP17AQ02040 695 aaKnown RBP16.07■□□□□ 0.16
CCBE1-204ENST00000589419 GPATCH4Q5T3I0 446 aaKnown RBP16.07■□□□□ 0.16
CCBE1-204ENST00000589419 IFFO2Q5TF58 517 aa16.07■□□□□ 0.16
CCBE1-204ENST00000589419 CLEC10AQ8IUN9 316 aa16.07■□□□□ 0.16
CCBE1-204ENST00000589419 DCAF4Q8WV16 495 aa16.07■□□□□ 0.16
CCBE1-204ENST00000589419 PHKBQ93100 1093 aa16.07■□□□□ 0.16
CCBE1-204ENST00000589419 C8orf76Q96K31 380 aa16.07■□□□□ 0.16
CCBE1-204ENST00000589419 SPZ1Q9BXG8 430 aa16.07■□□□□ 0.16
CCBE1-204ENST00000589419 ATP6V1DQ9Y5K8 247 aa16.07■□□□□ 0.16
CCBE1-204ENST00000589419 VPS37CA5D8V6 355 aaPredicted RBP16.06■□□□□ 0.16
CCBE1-204ENST00000589419 F13A1P00488 732 aa16.06■□□□□ 0.16
CCBE1-204ENST00000589419 JAG1P78504 1218 aa16.06■□□□□ 0.16
CCBE1-204ENST00000589419 SHROOM1Q2M3G4 852 aaPredicted RBP16.06■□□□□ 0.16
CCBE1-204ENST00000589419 USP48Q86UV5 1035 aa16.06■□□□□ 0.16
CCBE1-204ENST00000589419 SIAH1Q8IUQ4 282 aa16.06■□□□□ 0.16
CCBE1-204ENST00000589419 FAM177A1Q8N128 213 aaPredicted RBP16.06■□□□□ 0.16
CCBE1-204ENST00000589419 SRBD1Q8N5C6 995 aaKnown RBP16.06■□□□□ 0.16
CCBE1-204ENST00000589419 GBP4Q96PP9 640 aa16.06■□□□□ 0.16
CCBE1-204ENST00000589419 ALG1Q9BT22 464 aa16.06■□□□□ 0.16
CCBE1-204ENST00000589419 SCAF8Q9UPN6 1271 aaKnown RBP16.06■□□□□ 0.16
CCBE1-204ENST00000589419 MYH15Q9Y2K3 1946 aa16.06■□□□□ 0.16
CCBE1-204ENST00000589419 POTECB2RU33 542 aa16.05■□□□□ 0.16
CCBE1-204ENST00000589419 ATP2B2Q01814 1243 aa16.05■□□□□ 0.16
CCBE1-204ENST00000589419 ZNF543Q08ER8 600 aa16.05■□□□□ 0.16
CCBE1-204ENST00000589419 CDC37L1Q7L3B6 337 aa16.05■□□□□ 0.16
CCBE1-204ENST00000589419 KRT26Q7Z3Y9 468 aa16.05■□□□□ 0.16
CCBE1-204ENST00000589419 FBXO18Q8NFZ0 1043 aa16.05■□□□□ 0.16
CCBE1-204ENST00000589419 GMCL1Q96IK5 515 aa16.05■□□□□ 0.16
CCBE1-204ENST00000589419 TMX2Q9Y320 296 aa16.05■□□□□ 0.16
CCBE1-204ENST00000589419 OTOFQ9HC10 1997 aa16.05■□□□□ 0.16
CCBE1-204ENST00000589419 USP17L5A8MUK1 530 aa16.04■□□□□ 0.16
CCBE1-204ENST00000589419 KLRF2D3W0D1 207 aa16.04■□□□□ 0.16
CCBE1-204ENST00000589419 DTNBO60941 627 aa16.04■□□□□ 0.16
CCBE1-204ENST00000589419 XBP1P17861 261 aa16.04■□□□□ 0.16
CCBE1-204ENST00000589419 TRIM29Q14134 588 aa16.04■□□□□ 0.16
CCBE1-204ENST00000589419 NOL9Q5SY16 702 aaKnown RBP16.04■□□□□ 0.16
CCBE1-204ENST00000589419 SCYL3Q8IZE3 742 aa16.04■□□□□ 0.16
CCBE1-204ENST00000589419 STAG2Q8N3U4 1231 aa16.04■□□□□ 0.16
CCBE1-204ENST00000589419 ZSCAN16Q9H4T2 348 aaPredicted RBP16.04■□□□□ 0.16
CCBE1-204ENST00000589419 GOPCQ9HD26 462 aa16.04■□□□□ 0.16
CCBE1-204ENST00000589419 ADM5C9JUS6 153 aa16.03■□□□□ 0.16
CCBE1-204ENST00000589419 NF2P35240 595 aa16.03■□□□□ 0.16
CCBE1-204ENST00000589419 SLFN13Q68D06 897 aa16.03■□□□□ 0.16
CCBE1-204ENST00000589419 USP17L2Q6R6M4 530 aa16.03■□□□□ 0.16
CCBE1-204ENST00000589419 CMTR1Q8N1G2 835 aaKnown RBP16.03■□□□□ 0.16
CCBE1-204ENST00000589419 KLRG1Q96E93 195 aa16.03■□□□□ 0.16
CCBE1-204ENST00000589419 WRNIP1Q96S55 665 aa16.03■□□□□ 0.16
CCBE1-204ENST00000589419 PHIPQ8WWQ0 1821 aa16.03■□□□□ 0.16
CCBE1-204ENST00000589419 F5H6K3 240 aa16.02■□□□□ 0.16
CCBE1-204ENST00000589419 hCG_1984214I3L0E3 225 aa16.02■□□□□ 0.16
CCBE1-204ENST00000589419 NDUFB10O96000 172 aa16.02■□□□□ 0.16
CCBE1-204ENST00000589419 SCG2P13521 617 aa16.02■□□□□ 0.16
CCBE1-204ENST00000589419 VEGFAP15692 232 aaPredicted RBP16.02■□□□□ 0.16
CCBE1-204ENST00000589419 KLRC3Q07444 240 aa16.02■□□□□ 0.16
CCBE1-204ENST00000589419 PKN1Q16512 942 aa16.02■□□□□ 0.16
CCBE1-204ENST00000589419 PFKFB3Q16875 520 aaPredicted RBP16.02■□□□□ 0.16
CCBE1-204ENST00000589419 CCDC96Q2M329 555 aa16.02■□□□□ 0.16
CCBE1-204ENST00000589419 EAPPQ56P03 285 aaPredicted RBP16.02■□□□□ 0.16
CCBE1-204ENST00000589419 RASGRP2Q7LDG7 609 aa16.02■□□□□ 0.16
CCBE1-204ENST00000589419 ZNF713Q8N859 430 aaPredicted RBP16.02■□□□□ 0.16
CCBE1-204ENST00000589419 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.02■□□□□ 0.16
CCBE1-204ENST00000589419 RIOX1Q9H6W3 641 aa16.02■□□□□ 0.16
CCBE1-204ENST00000589419 VCPKMTQ9H867 229 aa16.02■□□□□ 0.16
CCBE1-204ENST00000589419 AS3MTQ9HBK9 375 aa16.02■□□□□ 0.16
CCBE1-204ENST00000589419 MTMR7Q9Y216 660 aa16.02■□□□□ 0.16
CCBE1-204ENST00000589419 V9GY48 417 aaPredicted RBP16.02■□□□□ 0.16
CCBE1-204ENST00000589419 A0A1W2PRG0 241 aa16.01■□□□□ 0.15
CCBE1-204ENST00000589419 PPP1R12BO60237 982 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms