RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 BTBD6Q96KE9 485 aa10.5□□□□□ -0.73
DNMT1-219ENST00000589349 USP20Q9Y2K6 914 aa10.5□□□□□ -0.73
DNMT1-219ENST00000589349 LTBP3Q9NS15 1303 aa10.5□□□□□ -0.73
DNMT1-219ENST00000589349 NUP98P52948 1817 aa10.49□□□□□ -0.73
DNMT1-219ENST00000589349 IQCA1LA6NCM1 817 aa10.49□□□□□ -0.73
DNMT1-219ENST00000589349 IRS4O14654 1257 aaPredicted RBP10.49□□□□□ -0.73
DNMT1-219ENST00000589349 BBOX1O75936 387 aa10.49□□□□□ -0.73
DNMT1-219ENST00000589349 MAP3K6O95382 1288 aa10.49□□□□□ -0.73
DNMT1-219ENST00000589349 ABL1P00519 1130 aa10.49□□□□□ -0.73
DNMT1-219ENST00000589349 HSP90B1P14625 803 aaKnown RBP10.49□□□□□ -0.73
DNMT1-219ENST00000589349 HOXA10P31260 410 aaPredicted RBP10.49□□□□□ -0.73
DNMT1-219ENST00000589349 HTRA3P83110 453 aa10.49□□□□□ -0.73
DNMT1-219ENST00000589349 NOM1Q5C9Z4 860 aaKnown RBP10.49□□□□□ -0.73
DNMT1-219ENST00000589349 SLC10A5Q5PT55 438 aa10.49□□□□□ -0.73
DNMT1-219ENST00000589349 UBE2OQ9C0C9 1292 aaKnown RBP10.49□□□□□ -0.73
DNMT1-219ENST00000589349 EGFL7Q9UHF1 273 aa10.49□□□□□ -0.73
DNMT1-219ENST00000589349 FNDC3AQ9Y2H6 1198 aaKnown RBP10.49□□□□□ -0.73
DNMT1-219ENST00000589349 MAP3K2Q9Y2U5 619 aa10.49□□□□□ -0.73
DNMT1-219ENST00000589349 IBTKQ9P2D0 1353 aaPredicted RBP10.49□□□□□ -0.73
DNMT1-219ENST00000589349 DLEC1Q9Y238 1755 aa10.49□□□□□ -0.73
DNMT1-219ENST00000589349 ZBTB39O15060 712 aa10.48□□□□□ -0.73
DNMT1-219ENST00000589349 FAM13AO94988 1023 aa10.48□□□□□ -0.73
DNMT1-219ENST00000589349 RARAP10276 462 aa10.48□□□□□ -0.73
DNMT1-219ENST00000589349 MPSTP25325 297 aa10.48□□□□□ -0.73
DNMT1-219ENST00000589349 ADH7P40394 386 aa10.48□□□□□ -0.73
DNMT1-219ENST00000589349 GRAPQ13588 217 aa10.48□□□□□ -0.73
DNMT1-219ENST00000589349 PCSK7Q16549 785 aa10.48□□□□□ -0.73
DNMT1-219ENST00000589349 AOC3Q16853 763 aa10.48□□□□□ -0.73
DNMT1-219ENST00000589349 CHSY3Q70JA7 882 aa10.48□□□□□ -0.73
DNMT1-219ENST00000589349 KRT25Q7Z3Z0 450 aa10.48□□□□□ -0.73
DNMT1-219ENST00000589349 SUPT20HQ8NEM7 779 aa10.48□□□□□ -0.73
DNMT1-219ENST00000589349 GRAPLQ8TC17 118 aaPredicted RBP10.48□□□□□ -0.73
DNMT1-219ENST00000589349 MDFIQ99750 246 aa10.48□□□□□ -0.73
DNMT1-219ENST00000589349 CWC25Q9NXE8 425 aaPredicted RBP10.48□□□□□ -0.73
DNMT1-219ENST00000589349 ATP6V0A2Q9Y487 856 aa10.48□□□□□ -0.73
DNMT1-219ENST00000589349 KCNMB2Q9Y691 235 aa10.48□□□□□ -0.73
DNMT1-219ENST00000589349 ABCC4O15439 1325 aa10.48□□□□□ -0.73
DNMT1-219ENST00000589349 RNF123Q5XPI4 1314 aa10.48□□□□□ -0.73
DNMT1-219ENST00000589349 SBF1O95248 1867 aa10.47□□□□□ -0.73
DNMT1-219ENST00000589349 CCDC88AQ3V6T2 1871 aa10.47□□□□□ -0.73
DNMT1-219ENST00000589349 RPLP1P05386 114 aaKnown RBP10.47□□□□□ -0.73
DNMT1-219ENST00000589349 PCSK2P16519 638 aa10.47□□□□□ -0.73
DNMT1-219ENST00000589349 CCDC27Q2M243 656 aa10.47□□□□□ -0.73
DNMT1-219ENST00000589349 KANK3Q6NY19 840 aa10.47□□□□□ -0.73
DNMT1-219ENST00000589349 SLC51AQ86UW1 340 aa10.47□□□□□ -0.73
DNMT1-219ENST00000589349 BEND7Q8N7W2 519 aaPredicted RBP10.47□□□□□ -0.73
DNMT1-219ENST00000589349 GPR152Q8TDT2 470 aa10.47□□□□□ -0.73
DNMT1-219ENST00000589349 PSMD1Q99460 953 aa10.47□□□□□ -0.73
DNMT1-219ENST00000589349 ISCA1Q9BUE6 129 aa10.47□□□□□ -0.73
DNMT1-219ENST00000589349 HACL1Q9UJ83 578 aa10.47□□□□□ -0.73
DNMT1-219ENST00000589349 ZNF541Q9H0D2 1346 aa10.47□□□□□ -0.73
DNMT1-219ENST00000589349 PI4KAP2A4QPH2 592 aa10.46□□□□□ -0.73
DNMT1-219ENST00000589349 PHF20L1A8MW92 1017 aa10.46□□□□□ -0.73
DNMT1-219ENST00000589349 PIK3R2O00459 728 aa10.46□□□□□ -0.73
DNMT1-219ENST00000589349 SASH3O75995 380 aa10.46□□□□□ -0.73
DNMT1-219ENST00000589349 BRD1O95696 1058 aa10.46□□□□□ -0.73
DNMT1-219ENST00000589349 NPR3P17342 541 aa10.46□□□□□ -0.73
DNMT1-219ENST00000589349 EXOSC9Q06265 439 aaKnown RBP10.46□□□□□ -0.73
DNMT1-219ENST00000589349 TBC1D8BQ0IIM8 1120 aa10.46□□□□□ -0.73
DNMT1-219ENST00000589349 MTMR3Q13615 1198 aa10.46□□□□□ -0.73
DNMT1-219ENST00000589349 KSR2Q6VAB6 950 aa10.46□□□□□ -0.73
DNMT1-219ENST00000589349 WDR63Q8IWG1 891 aa10.46□□□□□ -0.73
DNMT1-219ENST00000589349 SP8Q8IXZ3 490 aa10.46□□□□□ -0.73
DNMT1-219ENST00000589349 PI4KAP1Q8N8J0 262 aa10.46□□□□□ -0.73
DNMT1-219ENST00000589349 ZBTB38Q8NAP3 1195 aaPredicted RBP10.46□□□□□ -0.73
DNMT1-219ENST00000589349 METTL22Q9BUU2 404 aaPredicted RBP10.46□□□□□ -0.73
DNMT1-219ENST00000589349 BCL2L13Q9BXK5 485 aa10.46□□□□□ -0.73
DNMT1-219ENST00000589349 IGFLR1Q9H665 355 aa10.46□□□□□ -0.73
DNMT1-219ENST00000589349 MYH16Q9H6N6 1097 aa10.46□□□□□ -0.73
DNMT1-219ENST00000589349 MKL2Q9ULH7 1088 aa10.46□□□□□ -0.73
DNMT1-219ENST00000589349 TNRC6CQ9HCJ0 1690 aaKnown RBP10.45□□□□□ -0.74
DNMT1-219ENST00000589349 FANCIQ9NVI1 1328 aa10.45□□□□□ -0.74
DNMT1-219ENST00000589349 EPHX2P34913 555 aa10.45□□□□□ -0.74
DNMT1-219ENST00000589349 EIF1AXP47813 144 aaKnown RBP10.45□□□□□ -0.74
DNMT1-219ENST00000589349 ZNF211Q13398 564 aaPredicted RBP10.45□□□□□ -0.74
DNMT1-219ENST00000589349 CCDC152Q4G0S7 254 aa10.45□□□□□ -0.74
DNMT1-219ENST00000589349 CCDC191Q8NCU4 936 aa10.45□□□□□ -0.74
DNMT1-219ENST00000589349 IL16Q14005 1332 aa10.44□□□□□ -0.74
DNMT1-219ENST00000589349 TARSP26639 723 aaKnown RBP10.44□□□□□ -0.74
DNMT1-219ENST00000589349 RPS8P62241 208 aaKnown RBP10.44□□□□□ -0.74
DNMT1-219ENST00000589349 TRIP4Q15650 581 aaPredicted RBP10.44□□□□□ -0.74
DNMT1-219ENST00000589349 G2E3Q7L622 706 aa10.44□□□□□ -0.74
DNMT1-219ENST00000589349 DHX32Q7L7V1 743 aaKnown RBP10.44□□□□□ -0.74
DNMT1-219ENST00000589349 TMC4Q7Z404 712 aa10.44□□□□□ -0.74
DNMT1-219ENST00000589349 ATCAYQ86WG3 371 aa10.44□□□□□ -0.74
DNMT1-219ENST00000589349 GPC2Q8N158 579 aa10.44□□□□□ -0.74
DNMT1-219ENST00000589349 CELF1Q92879 486 aaKnown RBP10.44□□□□□ -0.74
DNMT1-219ENST00000589349 TAF1DQ9H5J8 278 aaPredicted RBP10.44□□□□□ -0.74
DNMT1-219ENST00000589349 DNAJB12Q9NXW2 375 aaKnown RBP10.44□□□□□ -0.74
DNMT1-219ENST00000589349 ZFATQ9P243 1243 aa10.44□□□□□ -0.74
DNMT1-219ENST00000589349 TIAM2Q8IVF5 1701 aa10.44□□□□□ -0.74
DNMT1-219ENST00000589349 FER1L6Q2WGJ9 1857 aa10.43□□□□□ -0.74
DNMT1-219ENST00000589349 FZD9O00144 591 aa10.43□□□□□ -0.74
DNMT1-219ENST00000589349 PDE8AO60658 829 aa10.43□□□□□ -0.74
DNMT1-219ENST00000589349 RAD17O75943 681 aa10.43□□□□□ -0.74
DNMT1-219ENST00000589349 PCCAP05165 728 aaPredicted RBP10.43□□□□□ -0.74
DNMT1-219ENST00000589349 SERPINB4P48594 390 aa10.43□□□□□ -0.74
DNMT1-219ENST00000589349 DGKGP49619 791 aa10.43□□□□□ -0.74
DNMT1-219ENST00000589349 TRIM28Q13263 835 aaKnown RBP10.43□□□□□ -0.74
DNMT1-219ENST00000589349 AAMPQ13685 434 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms