RNA–Protein interactions for RNA: ENST00000589266.5

CIRBP-223, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-223ENST00000589266 CCDC178Q5BJE1 867 aa29.5■■■□□ 2.31
CIRBP-223ENST00000589266 MIGA2Q7L4E1 593 aa29.5■■■□□ 2.31
CIRBP-223ENST00000589266 WRNIP1Q96S55 665 aa29.5■■■□□ 2.31
CIRBP-223ENST00000589266 TCP11L1Q9NUJ3 509 aa29.5■■■□□ 2.31
CIRBP-223ENST00000589266 ZSWIM5Q9P217 1185 aa29.5■■■□□ 2.31
CIRBP-223ENST00000589266 ZNF112Q9UJU3 913 aa29.5■■■□□ 2.31
CIRBP-223ENST00000589266 RPS6KB1P23443 525 aa29.49■■■□□ 2.31
CIRBP-223ENST00000589266 EXOSC10Q01780 885 aaKnown RBP29.49■■■□□ 2.31
CIRBP-223ENST00000589266 PPIL2Q13356 520 aa29.49■■■□□ 2.31
CIRBP-223ENST00000589266 MTFR1Q15390 333 aa29.49■■■□□ 2.31
CIRBP-223ENST00000589266 NEDD1Q8NHV4 660 aa29.49■■■□□ 2.31
CIRBP-223ENST00000589266 NKX2-3Q8TAU0 364 aa29.49■■■□□ 2.31
CIRBP-223ENST00000589266 ZKSCAN4Q969J2 545 aaPredicted RBP29.49■■■□□ 2.31
CIRBP-223ENST00000589266 RBM27Q9P2N5 1060 aaKnown RBP29.49■■■□□ 2.31
CIRBP-223ENST00000589266 TSPY2A6NKD2 308 aa29.48■■■□□ 2.31
CIRBP-223ENST00000589266 PHF20L1A8MW92 1017 aa29.48■■■□□ 2.31
CIRBP-223ENST00000589266 TSPY3P0CV98 308 aa29.48■■■□□ 2.31
CIRBP-223ENST00000589266 TSPY8P0CW00 308 aa29.48■■■□□ 2.31
CIRBP-223ENST00000589266 TFAP4Q01664 338 aa29.48■■■□□ 2.31
CIRBP-223ENST00000589266 PPP4R3BQ5MIZ7 849 aa29.48■■■□□ 2.31
CIRBP-223ENST00000589266 IQCA1Q86XH1 822 aa29.48■■■□□ 2.31
CIRBP-223ENST00000589266 FBXL16Q8N461 479 aa29.48■■■□□ 2.31
CIRBP-223ENST00000589266 SHISA4Q96DD7 197 aa29.48■■■□□ 2.31
CIRBP-223ENST00000589266 ALDH8A1Q9H2A2 487 aaPredicted RBP29.48■■■□□ 2.31
CIRBP-223ENST00000589266 FAM196BA6NMK8 535 aa29.47■■■□□ 2.31
CIRBP-223ENST00000589266 HOXD10P28358 340 aa29.47■■■□□ 2.31
CIRBP-223ENST00000589266 C17orf99Q6UX52 265 aa29.47■■■□□ 2.31
CIRBP-223ENST00000589266 TMEM87BQ96K49 555 aa29.47■■■□□ 2.31
CIRBP-223ENST00000589266 SRRDQ9UH36 339 aa29.47■■■□□ 2.31
CIRBP-223ENST00000589266 CTNND1O60716 968 aaKnown RBP29.46■■■□□ 2.31
CIRBP-223ENST00000589266 ECM2O94769 699 aaPredicted RBP29.46■■■□□ 2.31
CIRBP-223ENST00000589266 CAP2P40123 477 aa29.46■■■□□ 2.31
CIRBP-223ENST00000589266 PSMC4P43686 418 aa29.46■■■□□ 2.31
CIRBP-223ENST00000589266 SART3Q15020 963 aaKnown RBP29.46■■■□□ 2.31
CIRBP-223ENST00000589266 PRC1O43663 620 aa29.45■■■□□ 2.31
CIRBP-223ENST00000589266 SLURP2P0DP57 97 aa29.45■■■□□ 2.31
CIRBP-223ENST00000589266 ABCB5Q2M3G0 1257 aa29.45■■■□□ 2.31
CIRBP-223ENST00000589266 TMEM179Q6ZVK1 233 aa29.45■■■□□ 2.31
CIRBP-223ENST00000589266 CYB5R4Q7L1T6 521 aa29.45■■■□□ 2.31
CIRBP-223ENST00000589266 UPF3BQ9BZI7 483 aaKnown RBP29.45■■■□□ 2.31
CIRBP-223ENST00000589266 CABP5Q9NP86 173 aa29.45■■■□□ 2.31
CIRBP-223ENST00000589266 GREB1LQ9C091 1923 aaPredicted RBP29.45■■■□□ 2.3
CIRBP-223ENST00000589266 AKR1B1P15121 316 aa29.44■■■□□ 2.3
CIRBP-223ENST00000589266 NEK4P51957 841 aa29.44■■■□□ 2.3
CIRBP-223ENST00000589266 ANTXR2P58335 489 aa29.44■■■□□ 2.3
CIRBP-223ENST00000589266 PPATQ06203 517 aa29.44■■■□□ 2.3
CIRBP-223ENST00000589266 FAM47AQ5JRC9 791 aa29.44■■■□□ 2.3
CIRBP-223ENST00000589266 RAET1EQ8TD07 263 aa29.44■■■□□ 2.3
CIRBP-223ENST00000589266 UBAC1Q9BSL1 405 aa29.44■■■□□ 2.3
CIRBP-223ENST00000589266 HTATIP2Q9BUP3 242 aa29.44■■■□□ 2.3
CIRBP-223ENST00000589266 CPA4Q9UI42 421 aa29.44■■■□□ 2.3
CIRBP-223ENST00000589266 IGKV6D-41A0A0C4DH26 115 aa29.43■■■□□ 2.3
CIRBP-223ENST00000589266 ASNSP08243 561 aa29.43■■■□□ 2.3
CIRBP-223ENST00000589266 CTGFP29279 349 aa29.43■■■□□ 2.3
CIRBP-223ENST00000589266 GRK4P32298 578 aa29.43■■■□□ 2.3
CIRBP-223ENST00000589266 TRIM47Q96LD4 638 aa29.43■■■□□ 2.3
CIRBP-223ENST00000589266 TTC14Q96N46 770 aa29.43■■■□□ 2.3
CIRBP-223ENST00000589266 PDRG1Q9NUG6 133 aa29.43■■■□□ 2.3
CIRBP-223ENST00000589266 ERICH2A1L162 156 aa29.42■■■□□ 2.3
CIRBP-223ENST00000589266 FMNL1O95466 1100 aaPredicted RBP29.42■■■□□ 2.3
CIRBP-223ENST00000589266 GJB1P08034 283 aa29.42■■■□□ 2.3
CIRBP-223ENST00000589266 OSBPP22059 807 aa29.42■■■□□ 2.3
CIRBP-223ENST00000589266 GJA8P48165 433 aa29.42■■■□□ 2.3
CIRBP-223ENST00000589266 NOVP48745 357 aa29.42■■■□□ 2.3
CIRBP-223ENST00000589266 RRP1BQ14684 758 aaKnown RBP29.42■■■□□ 2.3
CIRBP-223ENST00000589266 NOL9Q5SY16 702 aaKnown RBP29.42■■■□□ 2.3
CIRBP-223ENST00000589266 DGKHQ86XP1 1220 aa29.42■■■□□ 2.3
CIRBP-223ENST00000589266 TMTC2Q8N394 836 aa29.42■■■□□ 2.3
CIRBP-223ENST00000589266 ANKS1AQ92625 1134 aa29.42■■■□□ 2.3
CIRBP-223ENST00000589266 ZSCAN10Q96SZ4 725 aaPredicted RBP29.42■■■□□ 2.3
CIRBP-223ENST00000589266 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.42■■■□□ 2.3
CIRBP-223ENST00000589266 AGXT2Q9BYV1 514 aa29.42■■■□□ 2.3
CIRBP-223ENST00000589266 ST18O60284 1047 aa29.41■■■□□ 2.3
CIRBP-223ENST00000589266 LIFRP42702 1097 aa29.41■■■□□ 2.3
CIRBP-223ENST00000589266 ANKRD1Q15327 319 aa29.41■■■□□ 2.3
CIRBP-223ENST00000589266 ANKRD23Q86SG2 305 aa29.41■■■□□ 2.3
CIRBP-223ENST00000589266 IGDCC4Q8TDY8 1250 aa29.41■■■□□ 2.3
CIRBP-223ENST00000589266 KANSL2Q9H9L4 492 aa29.41■■■□□ 2.3
CIRBP-223ENST00000589266 ZBTB21Q9ULJ3 1066 aa29.41■■■□□ 2.3
CIRBP-223ENST00000589266 NR2E3Q9Y5X4 410 aa29.41■■■□□ 2.3
CIRBP-223ENST00000589266 MPHOSPH10O00566 681 aaKnown RBP29.4■■■□□ 2.3
CIRBP-223ENST00000589266 IFIT3O14879 490 aaKnown RBP29.4■■■□□ 2.3
CIRBP-223ENST00000589266 CPA1P15085 419 aa29.4■■■□□ 2.3
CIRBP-223ENST00000589266 COL9A3Q14050 684 aaPredicted RBP29.4■■■□□ 2.3
CIRBP-223ENST00000589266 UBE2Q1Q7Z7E8 422 aa29.4■■■□□ 2.3
CIRBP-223ENST00000589266 SCYL3Q8IZE3 742 aa29.4■■■□□ 2.3
CIRBP-223ENST00000589266 IL17RBQ9NRM6 502 aa29.4■■■□□ 2.3
CIRBP-223ENST00000589266 PDHXO00330 501 aa29.39■■■□□ 2.3
CIRBP-223ENST00000589266 SH2B2O14492 632 aaPredicted RBP29.39■■■□□ 2.3
CIRBP-223ENST00000589266 GDF11O95390 407 aa29.39■■■□□ 2.3
CIRBP-223ENST00000589266 GH2P01242 217 aa29.39■■■□□ 2.3
CIRBP-223ENST00000589266 CCL5P13501 91 aa29.39■■■□□ 2.3
CIRBP-223ENST00000589266 SEC23AQ15436 765 aa29.39■■■□□ 2.3
CIRBP-223ENST00000589266 RNF208Q9H0X6 261 aa29.39■■■□□ 2.3
CIRBP-223ENST00000589266 BIN2Q9UBW5 565 aaPredicted RBP29.39■■■□□ 2.3
CIRBP-223ENST00000589266 TNKSO95271 1327 aa29.39■■■□□ 2.3
CIRBP-223ENST00000589266 MYPNQ86TC9 1320 aa29.39■■■□□ 2.3
CIRBP-223ENST00000589266 DOCK1Q14185 1865 aa29.38■■■□□ 2.29
CIRBP-223ENST00000589266 MCM2P49736 904 aa29.38■■■□□ 2.29
CIRBP-223ENST00000589266 UBXN2AP68543 259 aa29.38■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms