RNA–Protein interactions for RNA: ENST00000588738.5

ERCC1-207, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-207ENST00000588738 ZNF213O14771 459 aa22.29■■□□□ 1.16
ERCC1-207ENST00000588738 ORC4O43929 436 aa22.29■■□□□ 1.16
ERCC1-207ENST00000588738 FMNL1O95466 1100 aaPredicted RBP22.29■■□□□ 1.16
ERCC1-207ENST00000588738 FGRP09769 529 aa22.29■■□□□ 1.16
ERCC1-207ENST00000588738 HAND2P61296 217 aa22.29■■□□□ 1.16
ERCC1-207ENST00000588738 BMP2KLQ5H9B9 411 aa22.29■■□□□ 1.16
ERCC1-207ENST00000588738 GOPCQ9HD26 462 aa22.29■■□□□ 1.16
ERCC1-207ENST00000588738 TOMM22Q9NS69 142 aa22.29■■□□□ 1.16
ERCC1-207ENST00000588738 MTMR4Q9NYA4 1195 aa22.29■■□□□ 1.16
ERCC1-207ENST00000588738 CTNNA3Q9UI47 895 aa22.29■■□□□ 1.16
ERCC1-207ENST00000588738 ZSWIM8A7E2V4 1837 aa22.29■■□□□ 1.16
ERCC1-207ENST00000588738 PLIN4Q96Q06 1357 aa22.28■■□□□ 1.16
ERCC1-207ENST00000588738 RANBP6O60518 1105 aaKnown RBP22.28■■□□□ 1.16
ERCC1-207ENST00000588738 ECM2O94769 699 aaPredicted RBP22.28■■□□□ 1.16
ERCC1-207ENST00000588738 PCP11498 1178 aaKnown RBP22.28■■□□□ 1.16
ERCC1-207ENST00000588738 CEP95Q96GE4 821 aa22.28■■□□□ 1.16
ERCC1-207ENST00000588738 IL25Q9H293 177 aa22.28■■□□□ 1.16
ERCC1-207ENST00000588738 CLIP2Q9UDT6 1046 aa22.28■■□□□ 1.16
ERCC1-207ENST00000588738 PTPN22Q9Y2R2 807 aa22.28■■□□□ 1.16
ERCC1-207ENST00000588738 LAMA4Q16363 1823 aa22.27■■□□□ 1.16
ERCC1-207ENST00000588738 RAD21O60216 631 aa22.27■■□□□ 1.16
ERCC1-207ENST00000588738 TTLL1O95922 423 aa22.27■■□□□ 1.16
ERCC1-207ENST00000588738 HOXD10P28358 340 aa22.27■■□□□ 1.16
ERCC1-207ENST00000588738 FCGRTP55899 365 aa22.27■■□□□ 1.16
ERCC1-207ENST00000588738 KIAA1755Q5JYT7 1200 aa22.27■■□□□ 1.16
ERCC1-207ENST00000588738 PPP4R3BQ5MIZ7 849 aa22.27■■□□□ 1.16
ERCC1-207ENST00000588738 AKNAD1Q5T1N1 836 aa22.27■■□□□ 1.16
ERCC1-207ENST00000588738 IFFO2Q5TF58 517 aa22.27■■□□□ 1.16
ERCC1-207ENST00000588738 MFSD6Q6ZSS7 791 aa22.27■■□□□ 1.16
ERCC1-207ENST00000588738 SPICE1Q8N0Z3 855 aa22.27■■□□□ 1.16
ERCC1-207ENST00000588738 TRIM47Q96LD4 638 aa22.27■■□□□ 1.16
ERCC1-207ENST00000588738 TANGO6Q9C0B7 1094 aa22.27■■□□□ 1.16
ERCC1-207ENST00000588738 RNF41Q9H4P4 317 aaPredicted RBP22.27■■□□□ 1.16
ERCC1-207ENST00000588738 MORF4L1Q9UBU8 362 aa22.27■■□□□ 1.16
ERCC1-207ENST00000588738 TACC3Q9Y6A5 838 aa22.27■■□□□ 1.16
ERCC1-207ENST00000588738 WDR46O15213 610 aaKnown RBP22.26■■□□□ 1.15
ERCC1-207ENST00000588738 CTGFP29279 349 aa22.26■■□□□ 1.15
ERCC1-207ENST00000588738 PRMT2P55345 433 aa22.26■■□□□ 1.15
ERCC1-207ENST00000588738 COG2Q14746 738 aa22.26■■□□□ 1.15
ERCC1-207ENST00000588738 IMMTQ16891 758 aaKnown RBP22.26■■□□□ 1.15
ERCC1-207ENST00000588738 RRP12Q5JTH9 1297 aaKnown RBP22.26■■□□□ 1.15
ERCC1-207ENST00000588738 MKL1Q969V6 931 aa22.26■■□□□ 1.15
ERCC1-207ENST00000588738 HOXC10Q9NYD6 342 aa22.26■■□□□ 1.15
ERCC1-207ENST00000588738 SGSM2O43147 1006 aa22.25■■□□□ 1.15
ERCC1-207ENST00000588738 GPRC5AQ8NFJ5 357 aa22.25■■□□□ 1.15
ERCC1-207ENST00000588738 STAG1Q8WVM7 1258 aa22.25■■□□□ 1.15
ERCC1-207ENST00000588738 NBPF3Q9H094 633 aa22.25■■□□□ 1.15
ERCC1-207ENST00000588738 RBPJLQ9UBG7 517 aa22.25■■□□□ 1.15
ERCC1-207ENST00000588738 SYNPO2Q9UMS6 1093 aa22.25■■□□□ 1.15
ERCC1-207ENST00000588738 HPS5Q9UPZ3 1129 aa22.25■■□□□ 1.15
ERCC1-207ENST00000588738 LBX2Q6XYB7 198 aa22.24■■□□□ 1.15
ERCC1-207ENST00000588738 RABGAP1Q9Y3P9 1069 aa22.24■■□□□ 1.15
ERCC1-207ENST00000588738 F5H6K3 240 aa22.23■■□□□ 1.15
ERCC1-207ENST00000588738 KLRC3Q07444 240 aa22.23■■□□□ 1.15
ERCC1-207ENST00000588738 TBC1D10CQ8IV04 446 aa22.23■■□□□ 1.15
ERCC1-207ENST00000588738 PAGR1Q9BTK6 254 aa22.23■■□□□ 1.15
ERCC1-207ENST00000588738 TXNRD2Q9NNW7 524 aa22.23■■□□□ 1.15
ERCC1-207ENST00000588738 SRRDQ9UH36 339 aa22.23■■□□□ 1.15
ERCC1-207ENST00000588738 CCDC85CA6NKD9 419 aa22.22■■□□□ 1.15
ERCC1-207ENST00000588738 SPDYE16A6NNV3 312 aaPredicted RBP22.22■■□□□ 1.15
ERCC1-207ENST00000588738 TNPO2O14787 897 aaKnown RBP22.22■■□□□ 1.15
ERCC1-207ENST00000588738 CAPN15O75808 1086 aa22.22■■□□□ 1.15
ERCC1-207ENST00000588738 FLOT1O75955 427 aa22.22■■□□□ 1.15
ERCC1-207ENST00000588738 NT5C2P49902 561 aa22.22■■□□□ 1.15
ERCC1-207ENST00000588738 ERVK-9P63128 1117 aa22.22■■□□□ 1.15
ERCC1-207ENST00000588738 ERVK-24P63145 666 aa22.22■■□□□ 1.15
ERCC1-207ENST00000588738 COA7Q96BR5 231 aa22.22■■□□□ 1.15
ERCC1-207ENST00000588738 IL17RBQ9NRM6 502 aa22.22■■□□□ 1.15
ERCC1-207ENST00000588738 STX8Q9UNK0 236 aa22.22■■□□□ 1.15
ERCC1-207ENST00000588738 RLFQ13129 1914 aa22.21■■□□□ 1.15
ERCC1-207ENST00000588738 NMT2O60551 498 aa22.21■■□□□ 1.15
ERCC1-207ENST00000588738 PTH1RQ03431 593 aa22.21■■□□□ 1.15
ERCC1-207ENST00000588738 FAM83BQ5T0W9 1011 aa22.21■■□□□ 1.15
ERCC1-207ENST00000588738 POTEEQ6S8J3 1075 aa22.21■■□□□ 1.15
ERCC1-207ENST00000588738 KIAA1211Q6ZU35 1233 aa22.21■■□□□ 1.15
ERCC1-207ENST00000588738 CCAR1Q8IX12 1150 aaKnown RBP22.21■■□□□ 1.15
ERCC1-207ENST00000588738 GMCL1P1Q8NEA9 526 aa22.21■■□□□ 1.15
ERCC1-207ENST00000588738 ESR2Q92731 530 aa22.21■■□□□ 1.15
ERCC1-207ENST00000588738 TCP11L1Q9NUJ3 509 aa22.21■■□□□ 1.15
ERCC1-207ENST00000588738 PTCH2Q9Y6C5 1203 aa22.21■■□□□ 1.15
ERCC1-207ENST00000588738 U3KPZ7 1027 aaPredicted RBP22.21■■□□□ 1.15
ERCC1-207ENST00000588738 PARP14Q460N5 1801 aa22.21■■□□□ 1.15
ERCC1-207ENST00000588738 MYPNQ86TC9 1320 aa22.21■■□□□ 1.15
ERCC1-207ENST00000588738 PEX10O60683 326 aa22.2■■□□□ 1.14
ERCC1-207ENST00000588738 NDUFB10O96000 172 aa22.2■■□□□ 1.14
ERCC1-207ENST00000588738 DSG3P32926 999 aa22.2■■□□□ 1.14
ERCC1-207ENST00000588738 CCNA1P78396 465 aa22.2■■□□□ 1.14
ERCC1-207ENST00000588738 Q3C1V9 767 aa22.2■■□□□ 1.14
ERCC1-207ENST00000588738 CASC1Q6TDU7 716 aa22.2■■□□□ 1.14
ERCC1-207ENST00000588738 LRRC47Q8N1G4 583 aaKnown RBP22.2■■□□□ 1.14
ERCC1-207ENST00000588738 HTTP42858 3142 aa22.2■■□□□ 1.14
ERCC1-207ENST00000588738 DOCK3Q8IZD9 2030 aa22.19■■□□□ 1.14
ERCC1-207ENST00000588738 MAPK4P31152 587 aa22.19■■□□□ 1.14
ERCC1-207ENST00000588738 SAMD1Q6SPF0 538 aaPredicted RBP22.19■■□□□ 1.14
ERCC1-207ENST00000588738 MB21D1Q8N884 522 aa22.19■■□□□ 1.14
ERCC1-207ENST00000588738 RAET1EQ8TD07 263 aa22.19■■□□□ 1.14
ERCC1-207ENST00000588738 ESYT1Q9BSJ8 1104 aa22.19■■□□□ 1.14
ERCC1-207ENST00000588738 CNNM2Q9H8M5 875 aa22.19■■□□□ 1.14
ERCC1-207ENST00000588738 NEDD4P46934 1319 aa22.19■■□□□ 1.14
ERCC1-207ENST00000588738 CNMDO75829 334 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms