RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 GDF2Q9UK05 429 aaPredicted RBP10.25□□□□□ -0.77
VMP1-208ENST00000588617 DDX3YO15523 660 aaKnown RBP10.24□□□□□ -0.77
VMP1-208ENST00000588617 LILRB5O75023 590 aa10.24□□□□□ -0.77
VMP1-208ENST00000588617 ALBP02768 609 aa10.24□□□□□ -0.77
VMP1-208ENST00000588617 FGFR1P11362 822 aa10.24□□□□□ -0.77
VMP1-208ENST00000588617 GAS6Q14393 721 aa10.24□□□□□ -0.77
VMP1-208ENST00000588617 NFE2Q16621 373 aaPredicted RBP10.24□□□□□ -0.77
VMP1-208ENST00000588617 CCDC144CPQ8IYA2 1237 aa10.24□□□□□ -0.77
VMP1-208ENST00000588617 EXOC8Q8IYI6 725 aa10.24□□□□□ -0.77
VMP1-208ENST00000588617 AHI1Q8N157 1196 aa10.24□□□□□ -0.77
VMP1-208ENST00000588617 PPM1KQ8N3J5 372 aa10.24□□□□□ -0.77
VMP1-208ENST00000588617 BAHD1Q8TBE0 780 aaPredicted RBP10.24□□□□□ -0.77
VMP1-208ENST00000588617 KLHL25Q9H0H3 589 aa10.24□□□□□ -0.77
VMP1-208ENST00000588617 SFMBT1Q9UHJ3 866 aa10.24□□□□□ -0.77
VMP1-208ENST00000588617 SPDYE3A6NKU9 549 aa10.23□□□□□ -0.77
VMP1-208ENST00000588617 KATNA1O75449 491 aa10.23□□□□□ -0.77
VMP1-208ENST00000588617 DLGAP3O95886 979 aa10.23□□□□□ -0.77
VMP1-208ENST00000588617 GRIA2P42262 883 aa10.23□□□□□ -0.77
VMP1-208ENST00000588617 STRN3Q13033 797 aa10.23□□□□□ -0.77
VMP1-208ENST00000588617 MORC4Q8TE76 937 aa10.23□□□□□ -0.77
VMP1-208ENST00000588617 DPH2Q9BQC3 489 aaPredicted RBP10.23□□□□□ -0.77
VMP1-208ENST00000588617 STK17AQ9UEE5 414 aa10.23□□□□□ -0.77
VMP1-208ENST00000588617 NOP56O00567 594 aaKnown RBP10.22□□□□□ -0.77
VMP1-208ENST00000588617 CBFA2T2O43439 604 aa10.22□□□□□ -0.77
VMP1-208ENST00000588617 DNAJC8O75937 253 aaPredicted RBP10.22□□□□□ -0.77
VMP1-208ENST00000588617 RASGRP1O95267 797 aa10.22□□□□□ -0.77
VMP1-208ENST00000588617 EYA4O95677 639 aa10.22□□□□□ -0.77
VMP1-208ENST00000588617 VSIG8P0DPA2 414 aa10.22□□□□□ -0.77
VMP1-208ENST00000588617 SETDB1Q15047 1291 aa10.22□□□□□ -0.77
VMP1-208ENST00000588617 PPP2R5AQ15172 486 aa10.22□□□□□ -0.77
VMP1-208ENST00000588617 DCAF15Q66K64 600 aa10.22□□□□□ -0.77
VMP1-208ENST00000588617 MSL1Q68DK7 614 aa10.22□□□□□ -0.77
VMP1-208ENST00000588617 CDC37L1Q7L3B6 337 aa10.22□□□□□ -0.77
VMP1-208ENST00000588617 GALNT11Q8NCW6 608 aa10.22□□□□□ -0.77
VMP1-208ENST00000588617 OSBP2Q969R2 916 aa10.22□□□□□ -0.77
VMP1-208ENST00000588617 ZNF512BQ96KM6 892 aaPredicted RBP10.22□□□□□ -0.77
VMP1-208ENST00000588617 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.22□□□□□ -0.77
VMP1-208ENST00000588617 GBP3Q9H0R5 595 aa10.22□□□□□ -0.77
VMP1-208ENST00000588617 FBRSQ9HAH7 460 aa10.22□□□□□ -0.77
VMP1-208ENST00000588617 MBIPQ9NS73 344 aa10.22□□□□□ -0.77
VMP1-208ENST00000588617 NDOR1Q9UHB4 597 aa10.22□□□□□ -0.77
VMP1-208ENST00000588617 TSPAN6O43657 245 aa10.21□□□□□ -0.77
VMP1-208ENST00000588617 LORP23490 312 aaPredicted RBP10.21□□□□□ -0.77
VMP1-208ENST00000588617 NEK4P51957 841 aa10.21□□□□□ -0.77
VMP1-208ENST00000588617 NKG7Q16617 165 aa10.21□□□□□ -0.77
VMP1-208ENST00000588617 GOLGA6L1Q8N7Z2 621 aa10.21□□□□□ -0.77
VMP1-208ENST00000588617 PMM1Q92871 262 aa10.21□□□□□ -0.77
VMP1-208ENST00000588617 PPP1R9AQ9ULJ8 1098 aa10.21□□□□□ -0.77
VMP1-208ENST00000588617 SYNGAP1Q96PV0 1343 aa10.21□□□□□ -0.78
VMP1-208ENST00000588617 TM4SF5O14894 197 aa10.2□□□□□ -0.78
VMP1-208ENST00000588617 KIF3BO15066 747 aa10.2□□□□□ -0.78
VMP1-208ENST00000588617 TMPRSS2O15393 492 aa10.2□□□□□ -0.78
VMP1-208ENST00000588617 ADAM11O75078 769 aa10.2□□□□□ -0.78
VMP1-208ENST00000588617 PPM1BO75688 479 aa10.2□□□□□ -0.78
VMP1-208ENST00000588617 EXOSC6Q5RKV6 272 aaKnown RBP10.2□□□□□ -0.78
VMP1-208ENST00000588617 C8orf86Q6ZUL3 223 aa10.2□□□□□ -0.78
VMP1-208ENST00000588617 ZNF513Q8N8E2 541 aaPredicted RBP10.2□□□□□ -0.78
VMP1-208ENST00000588617 RNF214Q8ND24 703 aa10.2□□□□□ -0.78
VMP1-208ENST00000588617 BVESQ8NE79 360 aa10.2□□□□□ -0.78
VMP1-208ENST00000588617 SLC7A14Q8TBB6 771 aa10.2□□□□□ -0.78
VMP1-208ENST00000588617 WDR66Q8TBY9 1149 aa10.2□□□□□ -0.78
VMP1-208ENST00000588617 TRIM39Q9HCM9 518 aa10.2□□□□□ -0.78
VMP1-208ENST00000588617 M0R082 166 aa10.19□□□□□ -0.78
VMP1-208ENST00000588617 TBX1O43435 398 aa10.19□□□□□ -0.78
VMP1-208ENST00000588617 OPA1O60313 960 aa10.19□□□□□ -0.78
VMP1-208ENST00000588617 NTF4P34130 210 aa10.19□□□□□ -0.78
VMP1-208ENST00000588617 CD68P34810 354 aaPredicted RBP10.19□□□□□ -0.78
VMP1-208ENST00000588617 PCBP1Q15365 356 aaKnown RBP eCLIP10.19□□□□□ -0.78
VMP1-208ENST00000588617 TRIM61Q5EBN2 209 aa10.19□□□□□ -0.78
VMP1-208ENST00000588617 SLCO4C1Q6ZQN7 724 aa10.19□□□□□ -0.78
VMP1-208ENST00000588617 BRAPQ7Z569 592 aa10.19□□□□□ -0.78
VMP1-208ENST00000588617 ZNF417Q8TAU3 575 aa10.19□□□□□ -0.78
VMP1-208ENST00000588617 RELTQ969Z4 430 aa10.19□□□□□ -0.78
VMP1-208ENST00000588617 ZNF587Q96SQ5 575 aaPredicted RBP10.19□□□□□ -0.78
VMP1-208ENST00000588617 ASPSCR1Q9BZE9 553 aa10.19□□□□□ -0.78
VMP1-208ENST00000588617 MKRN2Q9H000 416 aaKnown RBP10.19□□□□□ -0.78
VMP1-208ENST00000588617 SLC5A4Q9NY91 659 aa10.19□□□□□ -0.78
VMP1-208ENST00000588617 CRIM1Q9NZV1 1036 aa10.19□□□□□ -0.78
VMP1-208ENST00000588617 ZNF451Q9Y4E5 1061 aa10.19□□□□□ -0.78
VMP1-208ENST00000588617 FAM83GA6ND36 823 aa10.18□□□□□ -0.78
VMP1-208ENST00000588617 MCL1Q07820 350 aa10.18□□□□□ -0.78
VMP1-208ENST00000588617 LRRC41Q15345 812 aa10.18□□□□□ -0.78
VMP1-208ENST00000588617 MAP4K3Q8IVH8 894 aa10.18□□□□□ -0.78
VMP1-208ENST00000588617 KCT2Q8NC54 265 aa10.18□□□□□ -0.78
VMP1-208ENST00000588617 CYB5D2Q8WUJ1 264 aa10.18□□□□□ -0.78
VMP1-208ENST00000588617 FANCD2OSQ96PS1 177 aa10.18□□□□□ -0.78
VMP1-208ENST00000588617 SLC52A2Q9HAB3 445 aa10.18□□□□□ -0.78
VMP1-208ENST00000588617 DISC1Q9NRI5 854 aa10.18□□□□□ -0.78
VMP1-208ENST00000588617 AKT3Q9Y243 479 aa10.18□□□□□ -0.78
VMP1-208ENST00000588617 TNPO3Q9Y5L0 923 aaKnown RBP10.18□□□□□ -0.78
VMP1-208ENST00000588617 PHLDB1Q86UU1 1377 aa10.17□□□□□ -0.78
VMP1-208ENST00000588617 SHTN1A0MZ66 631 aa10.17□□□□□ -0.78
VMP1-208ENST00000588617 CAPNS1P04632 268 aa10.17□□□□□ -0.78
VMP1-208ENST00000588617 C6orf222P0C671 652 aaPredicted RBP10.17□□□□□ -0.78
VMP1-208ENST00000588617 EPXP11678 715 aa10.17□□□□□ -0.78
VMP1-208ENST00000588617 GABREP78334 506 aa10.17□□□□□ -0.78
VMP1-208ENST00000588617 ITKQ08881 620 aa10.17□□□□□ -0.78
VMP1-208ENST00000588617 FOXD4L6Q3SYB3 417 aaPredicted RBP10.17□□□□□ -0.78
VMP1-208ENST00000588617 PRAMEF13Q5VWM6 474 aa10.17□□□□□ -0.78
VMP1-208ENST00000588617 RNF219Q5W0B1 726 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms