RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 A0A1W2PRG0 241 aa13.99□□□□□ -0.17
SDHDP1-201ENST00000588055 ERICH2A1L162 156 aa13.99□□□□□ -0.17
SDHDP1-201ENST00000588055 B4E1Z4 1266 aa13.99□□□□□ -0.17
SDHDP1-201ENST00000588055 USP17L15C9J2P7 530 aa13.99□□□□□ -0.17
SDHDP1-201ENST00000588055 USP17L13C9JLJ4 530 aa13.99□□□□□ -0.17
SDHDP1-201ENST00000588055 USP17L11C9JVI0 530 aa13.99□□□□□ -0.17
SDHDP1-201ENST00000588055 USP17L18D6R9N7 530 aa13.99□□□□□ -0.17
SDHDP1-201ENST00000588055 USP17L22D6RA61 530 aa13.99□□□□□ -0.17
SDHDP1-201ENST00000588055 USP17L17D6RBQ6 530 aa13.99□□□□□ -0.17
SDHDP1-201ENST00000588055 USP17L19D6RCP7 530 aa13.99□□□□□ -0.17
SDHDP1-201ENST00000588055 USP17L20D6RJB6 530 aa13.99□□□□□ -0.17
SDHDP1-201ENST00000588055 WDR46O15213 610 aaKnown RBP13.99□□□□□ -0.17
SDHDP1-201ENST00000588055 TLR2O60603 784 aa13.99□□□□□ -0.17
SDHDP1-201ENST00000588055 KDM4AO75164 1064 aa13.99□□□□□ -0.17
SDHDP1-201ENST00000588055 MCCP23508 829 aa13.99□□□□□ -0.17
SDHDP1-201ENST00000588055 LBX1P52954 281 aa13.99□□□□□ -0.17
SDHDP1-201ENST00000588055 USP17L24Q0WX57 530 aa13.99□□□□□ -0.17
SDHDP1-201ENST00000588055 DGKZQ13574 1117 aa13.99□□□□□ -0.17
SDHDP1-201ENST00000588055 NOM1Q5C9Z4 860 aaKnown RBP13.99□□□□□ -0.17
SDHDP1-201ENST00000588055 LRRC47Q8N1G4 583 aaKnown RBP13.99□□□□□ -0.17
SDHDP1-201ENST00000588055 NCOA7Q8NI08 942 aa13.99□□□□□ -0.17
SDHDP1-201ENST00000588055 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.99□□□□□ -0.17
SDHDP1-201ENST00000588055 RPAP3Q9H6T3 665 aaPredicted RBP13.99□□□□□ -0.17
SDHDP1-201ENST00000588055 INCENPQ9NQS7 918 aa13.99□□□□□ -0.17
SDHDP1-201ENST00000588055 EMILIN3Q9NT22 766 aa13.99□□□□□ -0.17
SDHDP1-201ENST00000588055 GPR25O00155 361 aa13.98□□□□□ -0.17
SDHDP1-201ENST00000588055 CYP2C8P10632 490 aa13.98□□□□□ -0.17
SDHDP1-201ENST00000588055 HOXA7P31268 230 aaPredicted RBP13.98□□□□□ -0.17
SDHDP1-201ENST00000588055 GCLCP48506 637 aaPredicted RBP13.98□□□□□ -0.17
SDHDP1-201ENST00000588055 KIF22Q14807 665 aa13.98□□□□□ -0.17
SDHDP1-201ENST00000588055 CREB3L3Q68CJ9 461 aa13.98□□□□□ -0.17
SDHDP1-201ENST00000588055 SPICE1Q8N0Z3 855 aa13.98□□□□□ -0.17
SDHDP1-201ENST00000588055 ASCC2Q9H1I8 757 aaPredicted RBP13.98□□□□□ -0.17
SDHDP1-201ENST00000588055 TCP11L1Q9NUJ3 509 aa13.98□□□□□ -0.17
SDHDP1-201ENST00000588055 E7EWF7 191 aa13.97□□□□□ -0.17
SDHDP1-201ENST00000588055 SLC27A2O14975 620 aa13.97□□□□□ -0.17
SDHDP1-201ENST00000588055 EPB41L2O43491 1005 aaKnown RBP13.97□□□□□ -0.17
SDHDP1-201ENST00000588055 FKTNO75072 461 aa13.97□□□□□ -0.17
SDHDP1-201ENST00000588055 KRT32Q14532 448 aa13.97□□□□□ -0.17
SDHDP1-201ENST00000588055 ARHGEF6Q15052 776 aa13.97□□□□□ -0.17
SDHDP1-201ENST00000588055 GMCL1P1Q8NEA9 526 aa13.97□□□□□ -0.17
SDHDP1-201ENST00000588055 ERO1AQ96HE7 468 aa13.97□□□□□ -0.17
SDHDP1-201ENST00000588055 PRDM10Q9NQV6 1147 aa13.97□□□□□ -0.17
SDHDP1-201ENST00000588055 TNKSO95271 1327 aa13.96□□□□□ -0.17
SDHDP1-201ENST00000588055 F5H6K3 240 aa13.96□□□□□ -0.17
SDHDP1-201ENST00000588055 NMT2O60551 498 aa13.96□□□□□ -0.17
SDHDP1-201ENST00000588055 FLOT1O75955 427 aa13.96□□□□□ -0.17
SDHDP1-201ENST00000588055 TOP1P11387 765 aaKnown RBP13.96□□□□□ -0.17
SDHDP1-201ENST00000588055 HERVK_113P62684 666 aa13.96□□□□□ -0.17
SDHDP1-201ENST00000588055 SP3Q02447 781 aa13.96□□□□□ -0.17
SDHDP1-201ENST00000588055 KLRC3Q07444 240 aa13.96□□□□□ -0.17
SDHDP1-201ENST00000588055 ZNF296Q8WUU4 475 aaPredicted RBP13.96□□□□□ -0.17
SDHDP1-201ENST00000588055 MKL1Q969V6 931 aa13.96□□□□□ -0.17
SDHDP1-201ENST00000588055 TTC14Q96N46 770 aa13.96□□□□□ -0.17
SDHDP1-201ENST00000588055 ZSCAN10Q96SZ4 725 aaPredicted RBP13.96□□□□□ -0.17
SDHDP1-201ENST00000588055 ZKSCAN3Q9BRR0 538 aa13.96□□□□□ -0.17
SDHDP1-201ENST00000588055 KAT14Q9H8E8 782 aa13.96□□□□□ -0.17
SDHDP1-201ENST00000588055 CPA4Q9UI42 421 aa13.96□□□□□ -0.17
SDHDP1-201ENST00000588055 TACC3Q9Y6A5 838 aa13.96□□□□□ -0.17
SDHDP1-201ENST00000588055 MYPNQ86TC9 1320 aa13.95□□□□□ -0.18
SDHDP1-201ENST00000588055 NDUFB10O96000 172 aa13.95□□□□□ -0.18
SDHDP1-201ENST00000588055 SLC1A4P43007 532 aa13.95□□□□□ -0.18
SDHDP1-201ENST00000588055 IKQ13123 557 aaPredicted RBP13.95□□□□□ -0.18
SDHDP1-201ENST00000588055 NECTIN1Q15223 517 aa13.95□□□□□ -0.18
SDHDP1-201ENST00000588055 FAM110CQ1W6H9 321 aa13.95□□□□□ -0.18
SDHDP1-201ENST00000588055 CCDC96Q2M329 555 aa13.95□□□□□ -0.18
SDHDP1-201ENST00000588055 FAM83BQ5T0W9 1011 aa13.95□□□□□ -0.18
SDHDP1-201ENST00000588055 IFIT1BQ5T764 474 aaKnown RBP13.95□□□□□ -0.18
SDHDP1-201ENST00000588055 SLFN13Q68D06 897 aa13.95□□□□□ -0.18
SDHDP1-201ENST00000588055 SAMD1Q6SPF0 538 aaPredicted RBP13.95□□□□□ -0.18
SDHDP1-201ENST00000588055 CATSPERGQ6ZRH7 1159 aa13.95□□□□□ -0.18
SDHDP1-201ENST00000588055 DGKHQ86XP1 1220 aa13.95□□□□□ -0.18
SDHDP1-201ENST00000588055 SIAH1Q8IUQ4 282 aa13.95□□□□□ -0.18
SDHDP1-201ENST00000588055 CCAR1Q8IX12 1150 aaKnown RBP13.95□□□□□ -0.18
SDHDP1-201ENST00000588055 IL17RBQ9NRM6 502 aa13.95□□□□□ -0.18
SDHDP1-201ENST00000588055 ZSWIM5Q9P217 1185 aa13.95□□□□□ -0.18
SDHDP1-201ENST00000588055 MTMR7Q9Y216 660 aa13.95□□□□□ -0.18
SDHDP1-201ENST00000588055 CTDP1Q9Y5B0 961 aaPredicted RBP13.95□□□□□ -0.18
SDHDP1-201ENST00000588055 ADGRA2Q96PE1 1338 aa13.94□□□□□ -0.18
SDHDP1-201ENST00000588055 MCM5P33992 734 aa13.94□□□□□ -0.18
SDHDP1-201ENST00000588055 COG2Q14746 738 aa13.94□□□□□ -0.18
SDHDP1-201ENST00000588055 ANKRD13CQ8N6S4 541 aa13.94□□□□□ -0.18
SDHDP1-201ENST00000588055 MB21D1Q8N884 522 aa13.94□□□□□ -0.18
SDHDP1-201ENST00000588055 DCAF4Q8WV16 495 aa13.94□□□□□ -0.18
SDHDP1-201ENST00000588055 GMCL1Q96IK5 515 aa13.94□□□□□ -0.18
SDHDP1-201ENST00000588055 PAGR1Q9BTK6 254 aa13.94□□□□□ -0.18
SDHDP1-201ENST00000588055 CWC22Q9HCG8 908 aaKnown RBP13.94□□□□□ -0.18
SDHDP1-201ENST00000588055 HOXC10Q9NYD6 342 aa13.94□□□□□ -0.18
SDHDP1-201ENST00000588055 IFIT3O14879 490 aaKnown RBP13.93□□□□□ -0.18
SDHDP1-201ENST00000588055 HMGB1P09429 215 aaKnown RBP13.93□□□□□ -0.18
SDHDP1-201ENST00000588055 BMP3P12645 472 aa13.93□□□□□ -0.18
SDHDP1-201ENST00000588055 STAT2P52630 851 aa13.93□□□□□ -0.18
SDHDP1-201ENST00000588055 CCNA1P78396 465 aa13.93□□□□□ -0.18
SDHDP1-201ENST00000588055 WTAPQ15007 396 aa13.93□□□□□ -0.18
SDHDP1-201ENST00000588055 C17orf99Q6UX52 265 aa13.93□□□□□ -0.18
SDHDP1-201ENST00000588055 STOX1Q6ZVD7 989 aa13.93□□□□□ -0.18
SDHDP1-201ENST00000588055 ENAHQ8N8S7 591 aaPredicted RBP13.93□□□□□ -0.18
SDHDP1-201ENST00000588055 PNMA1Q8ND90 353 aa13.93□□□□□ -0.18
SDHDP1-201ENST00000588055 SLF1Q9BQI6 1058 aa13.93□□□□□ -0.18
SDHDP1-201ENST00000588055 TMEM47Q9BQJ4 181 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms