RNA–Protein interactions for RNA: ENST00000588019.1

NLE1-204, Transcript of notchless homolog 1, humanhuman

TSL 5

Gene NLE1, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-204ENST00000588019 CLEC10AQ8IUN9 316 aa18.86■□□□□ 0.61
NLE1-204ENST00000588019 SIAH1Q8IUQ4 282 aa18.86■□□□□ 0.61
NLE1-204ENST00000588019 LRRC47Q8N1G4 583 aaKnown RBP18.86■□□□□ 0.61
NLE1-204ENST00000588019 NSUN7Q8NE18 718 aaKnown RBP18.86■□□□□ 0.61
NLE1-204ENST00000588019 SMARCC2Q8TAQ2 1214 aa18.86■□□□□ 0.61
NLE1-204ENST00000588019 PICK1Q9NRD5 415 aa18.86■□□□□ 0.61
NLE1-204ENST00000588019 KIF3AQ9Y496 699 aa18.86■□□□□ 0.61
NLE1-204ENST00000588019 SRCAPQ6ZRS2 3230 aa18.86■□□□□ 0.61
NLE1-204ENST00000588019 USP17L5A8MUK1 530 aa18.85■□□□□ 0.61
NLE1-204ENST00000588019 IFNAR1P17181 557 aa18.85■□□□□ 0.61
NLE1-204ENST00000588019 GJB2P29033 226 aa18.85■□□□□ 0.61
NLE1-204ENST00000588019 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.85■□□□□ 0.61
NLE1-204ENST00000588019 LZTS2Q9BRK4 669 aa18.85■□□□□ 0.61
NLE1-204ENST00000588019 CIZ1Q9ULV3 898 aaPredicted RBP18.85■□□□□ 0.61
NLE1-204ENST00000588019 PTPDC1A2A3K4 754 aa18.84■□□□□ 0.61
NLE1-204ENST00000588019 CTDNEP1O95476 244 aa18.84■□□□□ 0.61
NLE1-204ENST00000588019 PARP1P09874 1014 aaKnown RBP18.84■□□□□ 0.61
NLE1-204ENST00000588019 PDIA4P13667 645 aaKnown RBP18.84■□□□□ 0.61
NLE1-204ENST00000588019 MAP3K9P80192 1104 aa18.84■□□□□ 0.61
NLE1-204ENST00000588019 DLK2Q6UY11 383 aa18.84■□□□□ 0.61
NLE1-204ENST00000588019 GMCL1P1Q8NEA9 526 aa18.84■□□□□ 0.61
NLE1-204ENST00000588019 AS3MTQ9HBK9 375 aa18.84■□□□□ 0.61
NLE1-204ENST00000588019 TMX2Q9Y320 296 aa18.84■□□□□ 0.61
NLE1-204ENST00000588019 PALM3A6NDB9 673 aaPredicted RBP18.83■□□□□ 0.6
NLE1-204ENST00000588019 SNHG28P0DPA3 235 aa18.83■□□□□ 0.6
NLE1-204ENST00000588019 PDHBP11177 359 aa18.83■□□□□ 0.6
NLE1-204ENST00000588019 DDIT3P35638 169 aa18.83■□□□□ 0.6
NLE1-204ENST00000588019 PRKG1Q13976 671 aa18.83■□□□□ 0.6
NLE1-204ENST00000588019 NTRK3Q16288 839 aa18.83■□□□□ 0.6
NLE1-204ENST00000588019 MAP3K11Q16584 847 aa18.83■□□□□ 0.6
NLE1-204ENST00000588019 ASPRV1Q53RT3 343 aa18.83■□□□□ 0.6
NLE1-204ENST00000588019 TMTC3Q6ZXV5 915 aa18.83■□□□□ 0.6
NLE1-204ENST00000588019 ARMC9Q7Z3E5 817 aa18.83■□□□□ 0.6
NLE1-204ENST00000588019 FAM184AQ8NB25 1140 aa18.83■□□□□ 0.6
NLE1-204ENST00000588019 DCAF4Q8WV16 495 aa18.83■□□□□ 0.6
NLE1-204ENST00000588019 GOPCQ9HD26 462 aa18.83■□□□□ 0.6
NLE1-204ENST00000588019 MTMR7Q9Y216 660 aa18.83■□□□□ 0.6
NLE1-204ENST00000588019 POLR2AP24928 1970 aaKnown RBP18.82■□□□□ 0.6
NLE1-204ENST00000588019 F5H6K3 240 aa18.82■□□□□ 0.6
NLE1-204ENST00000588019 JAK2O60674 1132 aa18.82■□□□□ 0.6
NLE1-204ENST00000588019 PDCP20941 246 aa18.82■□□□□ 0.6
NLE1-204ENST00000588019 KLRC3Q07444 240 aa18.82■□□□□ 0.6
NLE1-204ENST00000588019 SSRP1Q08945 709 aaKnown RBP18.82■□□□□ 0.6
NLE1-204ENST00000588019 TTLL12Q14166 644 aaPredicted RBP18.82■□□□□ 0.6
NLE1-204ENST00000588019 GPATCH4Q5T3I0 446 aaKnown RBP18.82■□□□□ 0.6
NLE1-204ENST00000588019 SLFN13Q68D06 897 aa18.82■□□□□ 0.6
NLE1-204ENST00000588019 CHADLQ6NUI6 762 aa18.82■□□□□ 0.6
NLE1-204ENST00000588019 TRIM22Q8IYM9 498 aa18.82■□□□□ 0.6
NLE1-204ENST00000588019 ZKSCAN4Q969J2 545 aaPredicted RBP18.82■□□□□ 0.6
NLE1-204ENST00000588019 WDR18Q9BV38 432 aa18.82■□□□□ 0.6
NLE1-204ENST00000588019 CHMP5Q9NZZ3 219 aa18.82■□□□□ 0.6
NLE1-204ENST00000588019 MAD2L2Q9UI95 211 aa18.82■□□□□ 0.6
NLE1-204ENST00000588019 CSADQ9Y600 493 aa18.82■□□□□ 0.6
NLE1-204ENST00000588019 STK36Q9NRP7 1315 aa18.81■□□□□ 0.6
NLE1-204ENST00000588019 A0A1W2PRG0 241 aa18.81■□□□□ 0.6
NLE1-204ENST00000588019 UNCXA6NJT0 531 aa18.81■□□□□ 0.6
NLE1-204ENST00000588019 FMNL1O95466 1100 aaPredicted RBP18.81■□□□□ 0.6
NLE1-204ENST00000588019 PTPRAP18433 802 aa18.81■□□□□ 0.6
NLE1-204ENST00000588019 SMARCA1P28370 1054 aa18.81■□□□□ 0.6
NLE1-204ENST00000588019 AKAP17AQ02040 695 aaKnown RBP18.81■□□□□ 0.6
NLE1-204ENST00000588019 USP17L2Q6R6M4 530 aa18.81■□□□□ 0.6
NLE1-204ENST00000588019 ANKRD13AQ8IZ07 590 aa18.81■□□□□ 0.6
NLE1-204ENST00000588019 ACER1Q8TDN7 264 aa18.81■□□□□ 0.6
NLE1-204ENST00000588019 DDX11Q96FC9 970 aa18.81■□□□□ 0.6
NLE1-204ENST00000588019 GMCL1Q96IK5 515 aa18.81■□□□□ 0.6
NLE1-204ENST00000588019 RNF26Q9BY78 433 aaPredicted RBP18.81■□□□□ 0.6
NLE1-204ENST00000588019 GPBP1L1Q9HC44 474 aaPredicted RBP18.81■□□□□ 0.6
NLE1-204ENST00000588019 RBM27Q9P2N5 1060 aaKnown RBP18.81■□□□□ 0.6
NLE1-204ENST00000588019 ORC3Q9UBD5 711 aaPredicted RBP18.81■□□□□ 0.6
NLE1-204ENST00000588019 FZD1Q9UP38 647 aa18.81■□□□□ 0.6
NLE1-204ENST00000588019 KLRF2D3W0D1 207 aa18.8■□□□□ 0.6
NLE1-204ENST00000588019 ECE1P42892 770 aa18.8■□□□□ 0.6
NLE1-204ENST00000588019 SLC1A4P43007 532 aa18.8■□□□□ 0.6
NLE1-204ENST00000588019 FKBP1BP68106 108 aa18.8■□□□□ 0.6
NLE1-204ENST00000588019 NUCB2P80303 420 aa18.8■□□□□ 0.6
NLE1-204ENST00000588019 ZNF543Q08ER8 600 aa18.8■□□□□ 0.6
NLE1-204ENST00000588019 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.8■□□□□ 0.6
NLE1-204ENST00000588019 WASF1Q92558 559 aa18.8■□□□□ 0.6
NLE1-204ENST00000588019 FEZ1Q99689 392 aa18.8■□□□□ 0.6
NLE1-204ENST00000588019 SLC26A6Q9BXS9 759 aa18.8■□□□□ 0.6
NLE1-204ENST00000588019 KIAA1683Q9H0B3 1180 aa18.8■□□□□ 0.6
NLE1-204ENST00000588019 VCPKMTQ9H867 229 aa18.8■□□□□ 0.6
NLE1-204ENST00000588019 USP17L10C9JJH3 530 aa18.79■□□□□ 0.6
NLE1-204ENST00000588019 TRAF5O00463 557 aa18.79■□□□□ 0.6
NLE1-204ENST00000588019 PRPF3O43395 683 aaKnown RBP18.79■□□□□ 0.6
NLE1-204ENST00000588019 RAD21O60216 631 aa18.79■□□□□ 0.6
NLE1-204ENST00000588019 PLEKHA8P1O95397 391 aa18.79■□□□□ 0.6
NLE1-204ENST00000588019 NDUFB10O96000 172 aa18.79■□□□□ 0.6
NLE1-204ENST00000588019 USP14P54578 494 aa18.79■□□□□ 0.6
NLE1-204ENST00000588019 FUT2Q10981 343 aa18.79■□□□□ 0.6
NLE1-204ENST00000588019 VGLL4Q14135 290 aa18.79■□□□□ 0.6
NLE1-204ENST00000588019 CCDC96Q2M329 555 aa18.79■□□□□ 0.6
NLE1-204ENST00000588019 LARP1BQ659C4 914 aaKnown RBP18.79■□□□□ 0.6
NLE1-204ENST00000588019 NBPF11Q86T75 865 aa18.79■□□□□ 0.6
NLE1-204ENST00000588019 STAG2Q8N3U4 1231 aa18.79■□□□□ 0.6
NLE1-204ENST00000588019 SRBD1Q8N5C6 995 aaKnown RBP18.79■□□□□ 0.6
NLE1-204ENST00000588019 PHKBQ93100 1093 aa18.79■□□□□ 0.6
NLE1-204ENST00000588019 SPZ1Q9BXG8 430 aa18.79■□□□□ 0.6
NLE1-204ENST00000588019 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.79■□□□□ 0.6
NLE1-204ENST00000588019 DOCK1Q14185 1865 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms