RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 SH3RF3Q8TEJ3 882 aaPredicted RBP11.02□□□□□ -0.65
LINC01539-201ENST00000587904 CAMKK2Q96RR4 588 aa11.02□□□□□ -0.65
LINC01539-201ENST00000587904 ZKSCAN3Q9BRR0 538 aa11.02□□□□□ -0.65
LINC01539-201ENST00000587904 TACO1Q9BSH4 297 aaKnown RBP11.02□□□□□ -0.65
LINC01539-201ENST00000587904 MYL10Q9BUA6 226 aa11.02□□□□□ -0.65
LINC01539-201ENST00000587904 ZC3H12CQ9C0D7 883 aaKnown RBP11.02□□□□□ -0.65
LINC01539-201ENST00000587904 POLR3EQ9NVU0 708 aa11.02□□□□□ -0.65
LINC01539-201ENST00000587904 TAOK2Q9UL54 1235 aa11.02□□□□□ -0.65
LINC01539-201ENST00000587904 RRP15Q9Y3B9 282 aaKnown RBP11.02□□□□□ -0.65
LINC01539-201ENST00000587904 FOCADQ5VW36 1801 aa11.02□□□□□ -0.65
LINC01539-201ENST00000587904 CDK5RAP2Q96SN8 1893 aa11.01□□□□□ -0.65
LINC01539-201ENST00000587904 KLHL33A6NCF5 533 aa11.01□□□□□ -0.65
LINC01539-201ENST00000587904 BTDP43251 543 aa11.01□□□□□ -0.65
LINC01539-201ENST00000587904 DIXDC1Q155Q3 683 aa11.01□□□□□ -0.65
LINC01539-201ENST00000587904 ZSCAN26Q16670 478 aa11.01□□□□□ -0.65
LINC01539-201ENST00000587904 KCNG4Q8TDN1 519 aa11.01□□□□□ -0.65
LINC01539-201ENST00000587904 RNF26Q9BY78 433 aaPredicted RBP11.01□□□□□ -0.65
LINC01539-201ENST00000587904 H0YIN7 160 aa11□□□□□ -0.65
LINC01539-201ENST00000587904 GRIK5Q16478 980 aa11□□□□□ -0.65
LINC01539-201ENST00000587904 MYSM1Q5VVJ2 828 aa11□□□□□ -0.65
LINC01539-201ENST00000587904 KRT40Q6A162 431 aa11□□□□□ -0.65
LINC01539-201ENST00000587904 C2CD5Q86YS7 1000 aa11□□□□□ -0.65
LINC01539-201ENST00000587904 CCDC144CPQ8IYA2 1237 aa11□□□□□ -0.65
LINC01539-201ENST00000587904 OTUD6BQ8N6M0 293 aa11□□□□□ -0.65
LINC01539-201ENST00000587904 BICD2Q8TD16 824 aa11□□□□□ -0.65
LINC01539-201ENST00000587904 PHKBQ93100 1093 aa11□□□□□ -0.65
LINC01539-201ENST00000587904 ERO1AQ96HE7 468 aa11□□□□□ -0.65
LINC01539-201ENST00000587904 USP28Q96RU2 1077 aa11□□□□□ -0.65
LINC01539-201ENST00000587904 SLC26A6Q9BXS9 759 aa11□□□□□ -0.65
LINC01539-201ENST00000587904 NUP62CLQ9H1M0 184 aa11□□□□□ -0.65
LINC01539-201ENST00000587904 PYCARDQ9ULZ3 195 aa11□□□□□ -0.65
LINC01539-201ENST00000587904 LIG1P18858 919 aa11□□□□□ -0.65
LINC01539-201ENST00000587904 MAP2K2P36507 400 aa11□□□□□ -0.65
LINC01539-201ENST00000587904 SAFBQ15424 915 aaKnown RBP eCLIP11□□□□□ -0.65
LINC01539-201ENST00000587904 STK11IPQ8N1F8 1099 aa11□□□□□ -0.65
LINC01539-201ENST00000587904 CRACR2BQ8N4Y2 399 aaPredicted RBP11□□□□□ -0.65
LINC01539-201ENST00000587904 ANKRD20A12PQ8NF67 263 aa11□□□□□ -0.65
LINC01539-201ENST00000587904 PPM1EQ8WY54 764 aa11□□□□□ -0.65
LINC01539-201ENST00000587904 PGBD1Q96JS3 809 aa11□□□□□ -0.65
LINC01539-201ENST00000587904 MAP3K14Q99558 947 aa11□□□□□ -0.65
LINC01539-201ENST00000587904 PSD3Q9NYI0 1048 aa11□□□□□ -0.65
LINC01539-201ENST00000587904 TSPY2A6NKD2 308 aa10.99□□□□□ -0.65
LINC01539-201ENST00000587904 PPFIA3O75145 1194 aa10.99□□□□□ -0.65
LINC01539-201ENST00000587904 PRDM1O75626 825 aa10.99□□□□□ -0.65
LINC01539-201ENST00000587904 CPP00450 1065 aa10.99□□□□□ -0.65
LINC01539-201ENST00000587904 USP17L8P0C7I0 530 aa10.99□□□□□ -0.65
LINC01539-201ENST00000587904 CYP2D6P10635 497 aa10.99□□□□□ -0.65
LINC01539-201ENST00000587904 XBP1P17861 261 aa10.99□□□□□ -0.65
LINC01539-201ENST00000587904 TROAPQ12815 778 aa10.99□□□□□ -0.65
LINC01539-201ENST00000587904 GNL2Q13823 731 aaKnown RBP10.99□□□□□ -0.65
LINC01539-201ENST00000587904 DNAJC21Q5F1R6 531 aaKnown RBP10.99□□□□□ -0.65
LINC01539-201ENST00000587904 MSL1Q68DK7 614 aa10.99□□□□□ -0.65
LINC01539-201ENST00000587904 TEX11Q8IYF3 940 aa10.99□□□□□ -0.65
LINC01539-201ENST00000587904 NUP133Q8WUM0 1156 aa10.99□□□□□ -0.65
LINC01539-201ENST00000587904 ANKS1AQ92625 1134 aa10.99□□□□□ -0.65
LINC01539-201ENST00000587904 CNKSR1Q969H4 720 aa10.99□□□□□ -0.65
LINC01539-201ENST00000587904 ITFG2Q969R8 447 aa10.99□□□□□ -0.65
LINC01539-201ENST00000587904 KCNF1Q9H3M0 494 aa10.99□□□□□ -0.65
LINC01539-201ENST00000587904 TCP11L1Q9NUJ3 509 aa10.99□□□□□ -0.65
LINC01539-201ENST00000587904 A0A1W2PQ27 194 aa10.99□□□□□ -0.65
LINC01539-201ENST00000587904 A0A1W2PQ64 194 aa10.99□□□□□ -0.65
LINC01539-201ENST00000587904 A0A1W2PQD8 194 aa10.99□□□□□ -0.65
LINC01539-201ENST00000587904 FKBP1AP62942 108 aaKnown RBP10.99□□□□□ -0.65
LINC01539-201ENST00000587904 GTF2IP78347 998 aa10.99□□□□□ -0.65
LINC01539-201ENST00000587904 AKAP17AQ02040 695 aaKnown RBP10.99□□□□□ -0.65
LINC01539-201ENST00000587904 EZH2Q15910 746 aaKnown RBP10.99□□□□□ -0.65
LINC01539-201ENST00000587904 MAP3K11Q16584 847 aa10.99□□□□□ -0.65
LINC01539-201ENST00000587904 CC2D2BQ6DHV5 1058 aa10.99□□□□□ -0.65
LINC01539-201ENST00000587904 OTUD7BQ6GQQ9 843 aa10.99□□□□□ -0.65
LINC01539-201ENST00000587904 FBXO38Q6PIJ6 1188 aa10.99□□□□□ -0.65
LINC01539-201ENST00000587904 CCDC73Q6ZRK6 1079 aa10.99□□□□□ -0.65
LINC01539-201ENST00000587904 RBM43Q6ZSC3 357 aaKnown RBP10.99□□□□□ -0.65
LINC01539-201ENST00000587904 PODNQ7Z5L7 613 aa10.99□□□□□ -0.65
LINC01539-201ENST00000587904 PACS2Q86VP3 889 aa10.99□□□□□ -0.65
LINC01539-201ENST00000587904 DGKHQ86XP1 1220 aa10.99□□□□□ -0.65
LINC01539-201ENST00000587904 CTCFLQ8NI51 663 aaPredicted RBP10.99□□□□□ -0.65
LINC01539-201ENST00000587904 TGFBRAP1Q8WUH2 860 aa10.99□□□□□ -0.65
LINC01539-201ENST00000587904 FAM210AQ96ND0 272 aa10.99□□□□□ -0.65
LINC01539-201ENST00000587904 CLSTN2Q9H4D0 955 aa10.99□□□□□ -0.65
LINC01539-201ENST00000587904 DACT1Q9NYF0 836 aa10.99□□□□□ -0.65
LINC01539-201ENST00000587904 LCMT1Q9UIC8 334 aa10.99□□□□□ -0.65
LINC01539-201ENST00000587904 SMIM22K7EJ46 135 aa10.98□□□□□ -0.65
LINC01539-201ENST00000587904 CTAGE5O15320 804 aa10.98□□□□□ -0.65
LINC01539-201ENST00000587904 ATP8B1O43520 1251 aa10.98□□□□□ -0.65
LINC01539-201ENST00000587904 MMP1P03956 469 aa10.98□□□□□ -0.65
LINC01539-201ENST00000587904 POLR3DP05423 398 aaPredicted RBP10.98□□□□□ -0.65
LINC01539-201ENST00000587904 IVLP07476 585 aa10.98□□□□□ -0.65
LINC01539-201ENST00000587904 CCDC192P0DO97 292 aa10.98□□□□□ -0.65
LINC01539-201ENST00000587904 KIF5BP33176 963 aa10.98□□□□□ -0.65
LINC01539-201ENST00000587904 BAG6P46379 1132 aa10.98□□□□□ -0.65
LINC01539-201ENST00000587904 RHBDL3P58872 404 aa10.98□□□□□ -0.65
LINC01539-201ENST00000587904 STK38Q15208 465 aa10.98□□□□□ -0.65
LINC01539-201ENST00000587904 MMS22LQ6ZRQ5 1243 aa10.98□□□□□ -0.65
LINC01539-201ENST00000587904 LINC00301Q8NCQ3 95 aa10.98□□□□□ -0.65
LINC01539-201ENST00000587904 NEK11Q8NG66 645 aa10.98□□□□□ -0.65
LINC01539-201ENST00000587904 TNMDQ9H2S6 317 aa10.98□□□□□ -0.65
LINC01539-201ENST00000587904 FOXP1Q9H334 677 aaPredicted RBP10.98□□□□□ -0.65
LINC01539-201ENST00000587904 MKNK2Q9HBH9 465 aa10.98□□□□□ -0.65
LINC01539-201ENST00000587904 ST7Q9NRC1 585 aa10.98□□□□□ -0.65
LINC01539-201ENST00000587904 DAGLAQ9Y4D2 1042 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms