RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 COL6A1P12109 1028 aa17.1■□□□□ 0.33
ERCC1-205ENST00000587888 CYP2C19P33261 490 aa17.1■□□□□ 0.33
ERCC1-205ENST00000587888 LRRC26Q2I0M4 334 aa17.1■□□□□ 0.33
ERCC1-205ENST00000587888 SAMD1Q6SPF0 538 aaPredicted RBP17.1■□□□□ 0.33
ERCC1-205ENST00000587888 DPP9Q86TI2 863 aa17.1■□□□□ 0.33
ERCC1-205ENST00000587888 MBD4O95243 580 aa17.09■□□□□ 0.33
ERCC1-205ENST00000587888 GRB14Q14449 540 aa17.09■□□□□ 0.33
ERCC1-205ENST00000587888 PLS1Q14651 629 aa17.09■□□□□ 0.33
ERCC1-205ENST00000587888 KIAA1755Q5JYT7 1200 aa17.09■□□□□ 0.33
ERCC1-205ENST00000587888 TMEM179Q6ZVK1 233 aa17.09■□□□□ 0.33
ERCC1-205ENST00000587888 SPICE1Q8N0Z3 855 aa17.09■□□□□ 0.33
ERCC1-205ENST00000587888 MOV10L1Q9BXT6 1211 aaKnown RBP17.09■□□□□ 0.33
ERCC1-205ENST00000587888 UBE2OQ9C0C9 1292 aaKnown RBP17.09■□□□□ 0.33
ERCC1-205ENST00000587888 SENP6Q9GZR1 1112 aaPredicted RBP17.09■□□□□ 0.33
ERCC1-205ENST00000587888 SWAP70Q9UH65 585 aa17.09■□□□□ 0.33
ERCC1-205ENST00000587888 NAV1Q8NEY1 1877 aa17.09■□□□□ 0.33
ERCC1-205ENST00000587888 CYP2D7A0A087X1C5 515 aa17.08■□□□□ 0.32
ERCC1-205ENST00000587888 SMIM22K7EJ46 135 aa17.08■□□□□ 0.32
ERCC1-205ENST00000587888 CHGBP05060 677 aa17.08■□□□□ 0.32
ERCC1-205ENST00000587888 AKR1B1P15121 316 aa17.08■□□□□ 0.32
ERCC1-205ENST00000587888 ATP5JP18859 108 aa17.08■□□□□ 0.32
ERCC1-205ENST00000587888 ADD2P35612 726 aa17.08■□□□□ 0.32
ERCC1-205ENST00000587888 CLEC10AQ8IUN9 316 aa17.08■□□□□ 0.32
ERCC1-205ENST00000587888 SIAH1Q8IUQ4 282 aa17.08■□□□□ 0.32
ERCC1-205ENST00000587888 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.08■□□□□ 0.32
ERCC1-205ENST00000587888 ARHGEF10LQ9HCE6 1279 aa17.08■□□□□ 0.32
ERCC1-205ENST00000587888 DDX20Q9UHI6 824 aaKnown RBP17.08■□□□□ 0.32
ERCC1-205ENST00000587888 HOXC6P09630 235 aa17.07■□□□□ 0.32
ERCC1-205ENST00000587888 ERCC3P19447 782 aa17.07■□□□□ 0.32
ERCC1-205ENST00000587888 ADORA2AP29274 412 aa17.07■□□□□ 0.32
ERCC1-205ENST00000587888 TRPV1Q8NER1 839 aa17.07■□□□□ 0.32
ERCC1-205ENST00000587888 HAUS7Q99871 368 aa17.07■□□□□ 0.32
ERCC1-205ENST00000587888 SPATC1LQ9H0A9 340 aa17.07■□□□□ 0.32
ERCC1-205ENST00000587888 ATP8A2Q9NTI2 1148 aa17.07■□□□□ 0.32
ERCC1-205ENST00000587888 USP17L12C9JPN9 530 aa17.06■□□□□ 0.32
ERCC1-205ENST00000587888 USP17L21D6R901 530 aa17.06■□□□□ 0.32
ERCC1-205ENST00000587888 STRNO43815 780 aa17.06■□□□□ 0.32
ERCC1-205ENST00000587888 FLOT1O75955 427 aa17.06■□□□□ 0.32
ERCC1-205ENST00000587888 DSG3P32926 999 aa17.06■□□□□ 0.32
ERCC1-205ENST00000587888 CDK8P49336 464 aa17.06■□□□□ 0.32
ERCC1-205ENST00000587888 ATN1P54259 1190 aaPredicted RBP17.06■□□□□ 0.32
ERCC1-205ENST00000587888 MDM2Q00987 491 aaPredicted RBP17.06■□□□□ 0.32
ERCC1-205ENST00000587888 AMOTL1Q8IY63 956 aa17.06■□□□□ 0.32
ERCC1-205ENST00000587888 TDHQ8IZJ6 230 aa17.06■□□□□ 0.32
ERCC1-205ENST00000587888 SLC17A8Q8NDX2 589 aa17.06■□□□□ 0.32
ERCC1-205ENST00000587888 LPAR1Q92633 364 aa17.06■□□□□ 0.32
ERCC1-205ENST00000587888 CHMP4BQ9H444 224 aaKnown RBP17.06■□□□□ 0.32
ERCC1-205ENST00000587888 SLC4A4Q9Y6R1 1079 aa17.06■□□□□ 0.32
ERCC1-205ENST00000587888 SMARCA5O60264 1052 aaPredicted RBP17.05■□□□□ 0.32
ERCC1-205ENST00000587888 MSCO60682 206 aa17.05■□□□□ 0.32
ERCC1-205ENST00000587888 COBLO75128 1261 aa17.05■□□□□ 0.32
ERCC1-205ENST00000587888 MYCNP04198 464 aaPredicted RBP17.05■□□□□ 0.32
ERCC1-205ENST00000587888 ICA1Q05084 483 aa17.05■□□□□ 0.32
ERCC1-205ENST00000587888 GJC2Q5T442 439 aaPredicted RBP17.05■□□□□ 0.32
ERCC1-205ENST00000587888 C12orf60Q5U649 245 aa17.05■□□□□ 0.32
ERCC1-205ENST00000587888 ANO1Q5XXA6 986 aa17.05■□□□□ 0.32
ERCC1-205ENST00000587888 NCAPG2Q86XI2 1143 aa17.05■□□□□ 0.32
ERCC1-205ENST00000587888 ATG4CQ96DT6 458 aa17.05■□□□□ 0.32
ERCC1-205ENST00000587888 DDRGK1Q96HY6 314 aa17.05■□□□□ 0.32
ERCC1-205ENST00000587888 RCAN3Q9UKA8 241 aa17.05■□□□□ 0.32
ERCC1-205ENST00000587888 TMX2Q9Y320 296 aa17.05■□□□□ 0.32
ERCC1-205ENST00000587888 RAD21O60216 631 aa17.04■□□□□ 0.32
ERCC1-205ENST00000587888 LRIT3Q3SXY7 679 aa17.04■□□□□ 0.32
ERCC1-205ENST00000587888 PRAMEF19Q5SWL8 479 aa17.04■□□□□ 0.32
ERCC1-205ENST00000587888 Q7L0L9 218 aa17.04■□□□□ 0.32
ERCC1-205ENST00000587888 DEFB123Q8N688 67 aa17.04■□□□□ 0.32
ERCC1-205ENST00000587888 MB21D1Q8N884 522 aa17.04■□□□□ 0.32
ERCC1-205ENST00000587888 SHCBP1Q8NEM2 672 aa17.04■□□□□ 0.32
ERCC1-205ENST00000587888 CCDC17Q96LX7 622 aa17.04■□□□□ 0.32
ERCC1-205ENST00000587888 MROH8Q9H579 483 aa17.04■□□□□ 0.32
ERCC1-205ENST00000587888 SH2D4AQ9H788 454 aa17.04■□□□□ 0.32
ERCC1-205ENST00000587888 VCPKMTQ9H867 229 aa17.04■□□□□ 0.32
ERCC1-205ENST00000587888 CYBAP13498 195 aa17.03■□□□□ 0.32
ERCC1-205ENST00000587888 EEF2P13639 858 aaKnown RBP17.03■□□□□ 0.32
ERCC1-205ENST00000587888 UBE3CQ15386 1083 aa17.03■□□□□ 0.32
ERCC1-205ENST00000587888 C20orf194Q5TEA3 1177 aa17.03■□□□□ 0.32
ERCC1-205ENST00000587888 OLFML2BQ68BL8 750 aa17.03■□□□□ 0.32
ERCC1-205ENST00000587888 ZSCAN25Q6NSZ9 544 aa17.03■□□□□ 0.32
ERCC1-205ENST00000587888 CTR9Q6PD62 1173 aa17.03■□□□□ 0.32
ERCC1-205ENST00000587888 LRRCC1Q9C099 1032 aa17.03■□□□□ 0.32
ERCC1-205ENST00000587888 PUS7LQ9H0K6 701 aaKnown RBP17.03■□□□□ 0.32
ERCC1-205ENST00000587888 SLC5A4Q9NY91 659 aa17.03■□□□□ 0.32
ERCC1-205ENST00000587888 BAZ2AQ9UIF9 1905 aaKnown RBP17.03■□□□□ 0.32
ERCC1-205ENST00000587888 DNM1LO00429 736 aa17.02■□□□□ 0.32
ERCC1-205ENST00000587888 IGHA2P01877 340 aa17.02■□□□□ 0.32
ERCC1-205ENST00000587888 C16orf86Q6ZW13 317 aa17.02■□□□□ 0.32
ERCC1-205ENST00000587888 STK11IPQ8N1F8 1099 aa17.02■□□□□ 0.32
ERCC1-205ENST00000587888 ARRDC4Q8NCT1 418 aa17.02■□□□□ 0.32
ERCC1-205ENST00000587888 LBHD1Q9BQE6 289 aaPredicted RBP17.02■□□□□ 0.32
ERCC1-205ENST00000587888 WDR46O15213 610 aaKnown RBP17.01■□□□□ 0.31
ERCC1-205ENST00000587888 FCER1AP12319 257 aa17.01■□□□□ 0.31
ERCC1-205ENST00000587888 TMEM132BQ14DG7 1078 aa17.01■□□□□ 0.31
ERCC1-205ENST00000587888 GPR153Q6NV75 609 aa17.01■□□□□ 0.31
ERCC1-205ENST00000587888 KANSL2Q9H9L4 492 aa17.01■□□□□ 0.31
ERCC1-205ENST00000587888 FBXO28Q9NVF7 368 aa17.01■□□□□ 0.31
ERCC1-205ENST00000587888 RLFQ13129 1914 aa17.01■□□□□ 0.31
ERCC1-205ENST00000587888 FRMPD3Q5JV73 1810 aa17■□□□□ 0.31
ERCC1-205ENST00000587888 MYH8P13535 1937 aa17■□□□□ 0.31
ERCC1-205ENST00000587888 KBTBD13C9JR72 458 aa17■□□□□ 0.31
ERCC1-205ENST00000587888 RTP1P59025 263 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms