RNA–Protein interactions for RNA: ENST00000587451.2

CACNA1A-208, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-208ENST00000587451 DUSP13Q9UII6 198 aa7.56□□□□□ -1.2
CACNA1A-208ENST00000587451 LTKP29376 864 aa7.55□□□□□ -1.2
CACNA1A-208ENST00000587451 CCNFP41002 786 aa7.55□□□□□ -1.2
CACNA1A-208ENST00000587451 CRKP46108 304 aa7.55□□□□□ -1.2
CACNA1A-208ENST00000587451 CLEC16AQ2KHT3 1053 aa7.55□□□□□ -1.2
CACNA1A-208ENST00000587451 LCE1DQ5T752 114 aa7.55□□□□□ -1.2
CACNA1A-208ENST00000587451 OGFOD2Q6N063 350 aa7.55□□□□□ -1.2
CACNA1A-208ENST00000587451 TSPYL5Q86VY4 417 aaPredicted RBP7.55□□□□□ -1.2
CACNA1A-208ENST00000587451 DUSP15Q9H1R2 295 aaPredicted RBP7.55□□□□□ -1.2
CACNA1A-208ENST00000587451 FAM53CQ9NYF3 392 aa7.55□□□□□ -1.2
CACNA1A-208ENST00000587451 SLAMF8Q9P0V8 285 aa7.55□□□□□ -1.2
CACNA1A-208ENST00000587451 DNAJA2O60884 412 aa7.54□□□□□ -1.2
CACNA1A-208ENST00000587451 YBX3P16989 372 aaKnown RBP eCLIP7.54□□□□□ -1.2
CACNA1A-208ENST00000587451 VAMP1P23763 118 aa7.54□□□□□ -1.2
CACNA1A-208ENST00000587451 FANCCQ00597 558 aa7.54□□□□□ -1.2
CACNA1A-208ENST00000587451 OVOS1Q6IE37 1185 aa7.54□□□□□ -1.2
CACNA1A-208ENST00000587451 SLITRK4Q8IW52 837 aa7.54□□□□□ -1.2
CACNA1A-208ENST00000587451 KIRREL1Q96J84 757 aa7.54□□□□□ -1.2
CACNA1A-208ENST00000587451 TMEM59LQ9UK28 342 aa7.54□□□□□ -1.2
CACNA1A-208ENST00000587451 SCAMP3O14828 347 aaKnown RBP7.53□□□□□ -1.2
CACNA1A-208ENST00000587451 ESR1P03372 595 aa7.53□□□□□ -1.2
CACNA1A-208ENST00000587451 SRFP11831 508 aa7.53□□□□□ -1.2
CACNA1A-208ENST00000587451 IMPDH2P12268 514 aa7.53□□□□□ -1.2
CACNA1A-208ENST00000587451 CDCP2Q5VXM1 449 aa7.53□□□□□ -1.2
CACNA1A-208ENST00000587451 NLRC3Q7RTR2 1065 aa7.53□□□□□ -1.2
CACNA1A-208ENST00000587451 POU5F2Q8N7G0 328 aa7.53□□□□□ -1.2
CACNA1A-208ENST00000587451 CARMIL2Q6F5E8 1435 aa7.52□□□□□ -1.2
CACNA1A-208ENST00000587451 EGR3Q06889 387 aa7.52□□□□□ -1.21
CACNA1A-208ENST00000587451 GAB4Q2WGN9 574 aa7.52□□□□□ -1.21
CACNA1A-208ENST00000587451 TTC6Q86TZ1 520 aa7.52□□□□□ -1.21
CACNA1A-208ENST00000587451 ENOX1Q8TC92 643 aaKnown RBP7.52□□□□□ -1.21
CACNA1A-208ENST00000587451 DHX38Q92620 1227 aaKnown RBP7.52□□□□□ -1.21
CACNA1A-208ENST00000587451 CNNM2Q9H8M5 875 aa7.52□□□□□ -1.21
CACNA1A-208ENST00000587451 LRRN2O75325 713 aa7.51□□□□□ -1.21
CACNA1A-208ENST00000587451 CLEC3AO75596 197 aa7.51□□□□□ -1.21
CACNA1A-208ENST00000587451 FARP2O94887 1054 aaPredicted RBP7.51□□□□□ -1.21
CACNA1A-208ENST00000587451 GLI1P08151 1106 aa7.51□□□□□ -1.21
CACNA1A-208ENST00000587451 CLCQ05315 142 aa7.51□□□□□ -1.21
CACNA1A-208ENST00000587451 TMEM67Q5HYA8 995 aa7.51□□□□□ -1.21
CACNA1A-208ENST00000587451 LDLRAD1Q5T700 205 aa7.51□□□□□ -1.21
CACNA1A-208ENST00000587451 ATG4CQ96DT6 458 aa7.51□□□□□ -1.21
CACNA1A-208ENST00000587451 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.51□□□□□ -1.21
CACNA1A-208ENST00000587451 LRRC10BA6NIK2 292 aa7.5□□□□□ -1.21
CACNA1A-208ENST00000587451 MEIS3P2A8K0S8 358 aa7.5□□□□□ -1.21
CACNA1A-208ENST00000587451 UBOX5O94941 541 aa7.5□□□□□ -1.21
CACNA1A-208ENST00000587451 NMIQ13287 307 aaPredicted RBP7.5□□□□□ -1.21
CACNA1A-208ENST00000587451 MPZL3Q6UWV2 235 aa7.5□□□□□ -1.21
CACNA1A-208ENST00000587451 EAF1Q96JC9 268 aaPredicted RBP7.5□□□□□ -1.21
CACNA1A-208ENST00000587451 FERD3LQ96RJ6 166 aa7.5□□□□□ -1.21
CACNA1A-208ENST00000587451 SLC38A3Q99624 504 aa7.5□□□□□ -1.21
CACNA1A-208ENST00000587451 DNAJC25-GNG10A0A024R161 153 aa7.49□□□□□ -1.21
CACNA1A-208ENST00000587451 NME1P15531 152 aaKnown RBP7.49□□□□□ -1.21
CACNA1A-208ENST00000587451 HK2P52789 917 aa7.49□□□□□ -1.21
CACNA1A-208ENST00000587451 DUSP4Q13115 394 aa7.49□□□□□ -1.21
CACNA1A-208ENST00000587451 PKN1Q16512 942 aa7.49□□□□□ -1.21
CACNA1A-208ENST00000587451 ZNF394Q53GI3 561 aa7.49□□□□□ -1.21
CACNA1A-208ENST00000587451 OXR1Q8N573 874 aa7.49□□□□□ -1.21
CACNA1A-208ENST00000587451 ABHD4Q8TB40 342 aa7.49□□□□□ -1.21
CACNA1A-208ENST00000587451 SPATA32Q96LK8 384 aa7.49□□□□□ -1.21
CACNA1A-208ENST00000587451 PCDHGB7Q9Y5F8 929 aa7.49□□□□□ -1.21
CACNA1A-208ENST00000587451 PCDHA11Q9Y5I1 949 aa7.49□□□□□ -1.21
CACNA1A-208ENST00000587451 SSU72P8A0A1W2PR75 194 aa7.48□□□□□ -1.21
CACNA1A-208ENST00000587451 WASH4PA8MWX3 477 aa7.48□□□□□ -1.21
CACNA1A-208ENST00000587451 RECKO95980 971 aa7.48□□□□□ -1.21
CACNA1A-208ENST00000587451 POLR2BP30876 1174 aaKnown RBP7.48□□□□□ -1.21
CACNA1A-208ENST00000587451 TRIM26Q12899 539 aaPredicted RBP7.48□□□□□ -1.21
CACNA1A-208ENST00000587451 RALGPS1Q5JS13 557 aa7.48□□□□□ -1.21
CACNA1A-208ENST00000587451 NBPF12Q5TAG4 269 aaPredicted RBP7.48□□□□□ -1.21
CACNA1A-208ENST00000587451 KSR1Q8IVT5 923 aa7.48□□□□□ -1.21
CACNA1A-208ENST00000587451 ZNF654Q8IZM8 581 aa7.48□□□□□ -1.21
CACNA1A-208ENST00000587451 PDZD8Q8NEN9 1154 aa7.48□□□□□ -1.21
CACNA1A-208ENST00000587451 SYTL5Q8TDW5 730 aaPredicted RBP7.48□□□□□ -1.21
CACNA1A-208ENST00000587451 MYLIPQ8WY64 445 aa7.48□□□□□ -1.21
CACNA1A-208ENST00000587451 VWCEQ96DN2 955 aa7.48□□□□□ -1.21
CACNA1A-208ENST00000587451 DHRS1Q96LJ7 313 aa7.48□□□□□ -1.21
CACNA1A-208ENST00000587451 C19orf73Q9NVV2 129 aa7.48□□□□□ -1.21
CACNA1A-208ENST00000587451 ZNRF3Q9ULT6 936 aa7.48□□□□□ -1.21
CACNA1A-208ENST00000587451 TNFRSF10CO14798 259 aa7.47□□□□□ -1.21
CACNA1A-208ENST00000587451 COL9A2Q14055 689 aaPredicted RBP7.47□□□□□ -1.21
CACNA1A-208ENST00000587451 DAGLBQ8NCG7 672 aa7.47□□□□□ -1.21
CACNA1A-208ENST00000587451 MRRFQ96E11 262 aaKnown RBP7.47□□□□□ -1.21
CACNA1A-208ENST00000587451 MKRN2Q9H000 416 aaKnown RBP7.47□□□□□ -1.21
CACNA1A-208ENST00000587451 ADAMTS10Q9H324 1103 aa7.47□□□□□ -1.21
CACNA1A-208ENST00000587451 DDX41Q9UJV9 622 aaKnown RBP7.47□□□□□ -1.21
CACNA1A-208ENST00000587451 SHISA3A0PJX4 238 aa7.46□□□□□ -1.22
CACNA1A-208ENST00000587451 FITM1A5D6W6 292 aa7.46□□□□□ -1.22
CACNA1A-208ENST00000587451 CHRNEQ04844 493 aa7.46□□□□□ -1.22
CACNA1A-208ENST00000587451 MLANAQ16655 118 aa7.46□□□□□ -1.22
CACNA1A-208ENST00000587451 NBPF9Q3BBW0 867 aa7.46□□□□□ -1.22
CACNA1A-208ENST00000587451 FYB2Q5VWT5 728 aa7.46□□□□□ -1.22
CACNA1A-208ENST00000587451 FBXW10Q5XX13 1052 aa7.46□□□□□ -1.22
CACNA1A-208ENST00000587451 RNF111Q6ZNA4 994 aa7.46□□□□□ -1.22
CACNA1A-208ENST00000587451 SPPL2CQ8IUH8 684 aa7.46□□□□□ -1.22
CACNA1A-208ENST00000587451 LILRA2Q8N149 483 aa7.46□□□□□ -1.22
CACNA1A-208ENST00000587451 ZNF655Q8N720 491 aaPredicted RBP7.46□□□□□ -1.22
CACNA1A-208ENST00000587451 FAM84AQ96KN4 292 aa7.46□□□□□ -1.22
CACNA1A-208ENST00000587451 ZNF503-AS2A6NEH8 195 aa7.45□□□□□ -1.22
CACNA1A-208ENST00000587451 HPXP02790 462 aa7.45□□□□□ -1.22
CACNA1A-208ENST00000587451 PCBP3P57721 371 aaKnown RBP7.45□□□□□ -1.22
CACNA1A-208ENST00000587451 INTS3Q68E01 1043 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms