RNA–Protein interactions for RNA: ENST00000587449.1

CELF4-206, Transcript of CUGBP Elav-like family member 4, human

TSL 3

Gene CELF4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CELF4-206	ENST00000587449	TRIM34	Q9BYJ4	488 aa		13.57	□□□□□ -0.24
CELF4-206	ENST00000587449	KIAA1683	Q9H0B3	1180 aa		13.57	□□□□□ -0.24
CELF4-206	ENST00000587449	SLC5A4	Q9NY91	659 aa		13.57	□□□□□ -0.24
CELF4-206	ENST00000587449	HMG20B	Q9P0W2	317 aa		13.57	□□□□□ -0.24
CELF4-206	ENST00000587449	MSRA	Q9UJ68	235 aa		13.57	□□□□□ -0.24
CELF4-206	ENST00000587449	TBX21	Q9UL17	535 aa		13.57	□□□□□ -0.24
CELF4-206	ENST00000587449	REV3L	O60673	3130 aa		13.57	□□□□□ -0.24
CELF4-206	ENST00000587449	ERC2	O15083	957 aa		13.56	□□□□□ -0.24
CELF4-206	ENST00000587449	GH2	P01242	217 aa		13.56	□□□□□ -0.24
CELF4-206	ENST00000587449	KCNQ1	P51787	676 aa		13.56	□□□□□ -0.24
CELF4-206	ENST00000587449	MVP	Q14764	893 aa	Known RBP	13.56	□□□□□ -0.24
CELF4-206	ENST00000587449	TBC1D9	Q6ZT07	1266 aa		13.56	□□□□□ -0.24
CELF4-206	ENST00000587449	ABRA	Q8N0Z2	381 aa		13.56	□□□□□ -0.24
CELF4-206	ENST00000587449	XAGE2	Q96GT9	111 aa		13.56	□□□□□ -0.24
CELF4-206	ENST00000587449	C11orf16	Q9NQ32	467 aa		13.56	□□□□□ -0.24
CELF4-206	ENST00000587449	RAI14	Q9P0K7	980 aa		13.56	□□□□□ -0.24
CELF4-206	ENST00000587449	FLT1	P17948	1338 aa		13.56	□□□□□ -0.24
CELF4-206	ENST00000587449	ATAD5	Q96QE3	1844 aa		13.55	□□□□□ -0.24
CELF4-206	ENST00000587449	PGK1	P00558	417 aa		13.55	□□□□□ -0.24
CELF4-206	ENST00000587449	PLCG2	P16885	1265 aa		13.55	□□□□□ -0.24
CELF4-206	ENST00000587449	PSRC1	Q6PGN9	363 aa	Predicted RBP	13.55	□□□□□ -0.24
CELF4-206	ENST00000587449	PI16	Q6UXB8	463 aa		13.55	□□□□□ -0.24
CELF4-206	ENST00000587449	MAPKAPK5	Q8IW41	473 aa		13.55	□□□□□ -0.24
CELF4-206	ENST00000587449	SPATA5	Q8NB90	893 aa		13.55	□□□□□ -0.24
CELF4-206	ENST00000587449	TGFBRAP1	Q8WUH2	860 aa		13.55	□□□□□ -0.24
CELF4-206	ENST00000587449	MAML3	Q96JK9	1138 aa		13.55	□□□□□ -0.24
CELF4-206	ENST00000587449	NOL10	Q9BSC4	688 aa	Known RBP	13.55	□□□□□ -0.24
CELF4-206	ENST00000587449	TSEN34	Q9BSV6	310 aa	Known RBP	13.55	□□□□□ -0.24
CELF4-206	ENST00000587449	RPAP3	Q9H6T3	665 aa	Predicted RBP	13.55	□□□□□ -0.24
CELF4-206	ENST00000587449	PALD1	Q9ULE6	856 aa		13.55	□□□□□ -0.24
CELF4-206	ENST00000587449	PTPRC	P08575	1304 aa		13.55	□□□□□ -0.24
CELF4-206	ENST00000587449	ROBO3	Q96MS0	1386 aa		13.55	□□□□□ -0.24
CELF4-206	ENST00000587449		A0A1B0GUL7	405 aa		13.54	□□□□□ -0.24
CELF4-206	ENST00000587449	BAG3	O95817	575 aa		13.54	□□□□□ -0.24
CELF4-206	ENST00000587449	ERCC3	P19447	782 aa		13.54	□□□□□ -0.24
CELF4-206	ENST00000587449	PPP4C	P60510	307 aa		13.54	□□□□□ -0.24
CELF4-206	ENST00000587449	TATDN1	Q6P1N9	297 aa		13.54	□□□□□ -0.24
CELF4-206	ENST00000587449	ATF7IP	Q6VMQ6	1270 aa		13.54	□□□□□ -0.24
CELF4-206	ENST00000587449	ZNF365	Q70YC5	407 aa		13.54	□□□□□ -0.24
CELF4-206	ENST00000587449	MRPL50	Q8N5N7	158 aa	Known RBP	13.54	□□□□□ -0.24
CELF4-206	ENST00000587449	HERVK_113	Q902F9	699 aa		13.54	□□□□□ -0.24
CELF4-206	ENST00000587449	SPATC1L	Q9H0A9	340 aa		13.54	□□□□□ -0.24
CELF4-206	ENST00000587449	NKX2-4	Q9H2Z4	354 aa		13.54	□□□□□ -0.24
CELF4-206	ENST00000587449	SLC28A3	Q9HAS3	691 aa		13.54	□□□□□ -0.24
CELF4-206	ENST00000587449	COPRS	Q9NQ92	184 aa		13.54	□□□□□ -0.24
CELF4-206	ENST00000587449	PA2G4	Q9UQ80	394 aa	Known RBP	13.54	□□□□□ -0.24
CELF4-206	ENST00000587449	ZNF236	Q9UL36	1845 aa		13.53	□□□□□ -0.24
CELF4-206	ENST00000587449	ADAMTS4	O75173	837 aa		13.53	□□□□□ -0.24
CELF4-206	ENST00000587449	CSF2RA	P15509	400 aa		13.53	□□□□□ -0.24
CELF4-206	ENST00000587449	ACLY	P53396	1101 aa		13.53	□□□□□ -0.24
CELF4-206	ENST00000587449	TMEM199	Q8N511	208 aa		13.53	□□□□□ -0.24
CELF4-206	ENST00000587449	ACER1	Q8TDN7	264 aa		13.53	□□□□□ -0.24
CELF4-206	ENST00000587449	NUP133	Q8WUM0	1156 aa		13.53	□□□□□ -0.24
CELF4-206	ENST00000587449	MROH8	Q9H579	483 aa		13.53	□□□□□ -0.24
CELF4-206	ENST00000587449	STARD7	Q9NQZ5	370 aa		13.53	□□□□□ -0.24
CELF4-206	ENST00000587449	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
CELF4-206	ENST00000587449	AKAP2	Q9Y2D5	859 aa		13.53	□□□□□ -0.24
CELF4-206	ENST00000587449	YBX2	Q9Y2T7	364 aa	Known RBP	13.53	□□□□□ -0.24
CELF4-206	ENST00000587449	SIPA1L1	O43166	1804 aa		13.53	□□□□□ -0.24
CELF4-206	ENST00000587449	HLA-DOA	P06340	250 aa		13.52	□□□□□ -0.25
CELF4-206	ENST00000587449	ARID4A	P29374	1257 aa	Predicted RBP	13.52	□□□□□ -0.25
CELF4-206	ENST00000587449	COG2	Q14746	738 aa		13.52	□□□□□ -0.25
CELF4-206	ENST00000587449	MICALL1	Q8N3F8	863 aa		13.52	□□□□□ -0.25
CELF4-206	ENST00000587449	HOXC10	Q9NYD6	342 aa		13.52	□□□□□ -0.25
CELF4-206	ENST00000587449	LRP2BP	Q9P2M1	347 aa		13.52	□□□□□ -0.25
CELF4-206	ENST00000587449	SALL2	Q9Y467	1007 aa	Predicted RBP	13.52	□□□□□ -0.25
CELF4-206	ENST00000587449	ZNF521	Q96K83	1311 aa		13.52	□□□□□ -0.25
CELF4-206	ENST00000587449	TRANK1	O15050	2925 aa		13.52	□□□□□ -0.25
CELF4-206	ENST00000587449	MROH7	Q68CQ1	1323 aa		13.51	□□□□□ -0.25
CELF4-206	ENST00000587449	MOXD2P	A6NHM9	499 aa		13.51	□□□□□ -0.25
CELF4-206	ENST00000587449	CCER2	I3L3R5	266 aa		13.51	□□□□□ -0.25
CELF4-206	ENST00000587449	TLL1	O43897	1013 aa		13.51	□□□□□ -0.25
CELF4-206	ENST00000587449	ACR	P10323	421 aa		13.51	□□□□□ -0.25
CELF4-206	ENST00000587449	POU3F3	P20264	500 aa	Predicted RBP	13.51	□□□□□ -0.25
CELF4-206	ENST00000587449	CDK7	P50613	346 aa		13.51	□□□□□ -0.25
CELF4-206	ENST00000587449	RAB3GAP1	Q15042	981 aa		13.51	□□□□□ -0.25
CELF4-206	ENST00000587449	CCDC184	Q52MB2	194 aa		13.51	□□□□□ -0.25
CELF4-206	ENST00000587449	NAA16	Q6N069	864 aa	Predicted RBP	13.51	□□□□□ -0.25
CELF4-206	ENST00000587449	MB21D1	Q8N884	522 aa		13.51	□□□□□ -0.25
CELF4-206	ENST00000587449	KHSRP	Q92945	711 aa	Known RBP eCLIP	13.51	□□□□□ -0.25
CELF4-206	ENST00000587449	MTIF3	Q9H2K0	278 aa	Known RBP	13.51	□□□□□ -0.25
CELF4-206	ENST00000587449	SAP30BP	Q9UHR5	308 aa	Known RBP	13.51	□□□□□ -0.25
CELF4-206	ENST00000587449	FAM86C2P	A6NEL3	165 aa		13.5	□□□□□ -0.25
CELF4-206	ENST00000587449	UBTFL1	P0CB47	393 aa	Predicted RBP	13.5	□□□□□ -0.25
CELF4-206	ENST00000587449	ZNF865	P0CJ78	1059 aa	Predicted RBP	13.5	□□□□□ -0.25
CELF4-206	ENST00000587449	AKR1A1	P14550	325 aa		13.5	□□□□□ -0.25
CELF4-206	ENST00000587449	TAL1	P17542	331 aa	Predicted RBP	13.5	□□□□□ -0.25
CELF4-206	ENST00000587449	MRE11	P49959	708 aa		13.5	□□□□□ -0.25
CELF4-206	ENST00000587449	TFCP2	Q12800	502 aa		13.5	□□□□□ -0.25
CELF4-206	ENST00000587449	SKIV2L	Q15477	1246 aa	Known RBP	13.5	□□□□□ -0.25
CELF4-206	ENST00000587449	CCSAP	Q6IQ19	270 aa	Predicted RBP	13.5	□□□□□ -0.25
CELF4-206	ENST00000587449	ADGRA1	Q86SQ6	560 aa		13.5	□□□□□ -0.25
CELF4-206	ENST00000587449	KLHDC9	Q8NEP7	349 aa		13.5	□□□□□ -0.25
CELF4-206	ENST00000587449	TINF2	Q9BSI4	451 aa		13.5	□□□□□ -0.25
CELF4-206	ENST00000587449	IL23A	Q9NPF7	189 aa		13.5	□□□□□ -0.25
CELF4-206	ENST00000587449	COG5	Q9UP83	839 aa		13.5	□□□□□ -0.25
CELF4-206	ENST00000587449	ELP1	O95163	1332 aa		13.49	□□□□□ -0.25
CELF4-206	ENST00000587449	PI4K2B	G5E9Z4	385 aa		13.49	□□□□□ -0.25
CELF4-206	ENST00000587449	ANP32C	O43423	234 aa		13.49	□□□□□ -0.25
CELF4-206	ENST00000587449	FCER1A	P12319	257 aa		13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms