RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 TTLL12Q14166 644 aaPredicted RBP11.85□□□□□ -0.51
APOC1-201ENST00000586638 PRAMEF18Q5VWM3 479 aa11.85□□□□□ -0.51
APOC1-201ENST00000586638 MOB2Q70IA6 237 aa11.85□□□□□ -0.51
APOC1-201ENST00000586638 ZFPM1Q8IX07 1006 aa11.85□□□□□ -0.51
APOC1-201ENST00000586638 AIFM3Q96NN9 605 aa11.85□□□□□ -0.51
APOC1-201ENST00000586638 MRIQ9BWK5 157 aa11.85□□□□□ -0.51
APOC1-201ENST00000586638 FAM198AQ9UFP1 575 aa11.85□□□□□ -0.51
APOC1-201ENST00000586638 SCAF8Q9UPN6 1271 aaKnown RBP11.85□□□□□ -0.51
APOC1-201ENST00000586638 CNPY2Q9Y2B0 182 aa11.85□□□□□ -0.51
APOC1-201ENST00000586638 COL2A1P02458 1487 aaPredicted RBP11.84□□□□□ -0.51
APOC1-201ENST00000586638 CLRN2A0PK11 232 aa11.84□□□□□ -0.51
APOC1-201ENST00000586638 CDKL5O76039 1030 aa11.84□□□□□ -0.51
APOC1-201ENST00000586638 SLURP2P0DP57 97 aa11.84□□□□□ -0.51
APOC1-201ENST00000586638 TM4SF4P48230 202 aa11.84□□□□□ -0.51
APOC1-201ENST00000586638 RCAN1P53805 252 aa11.84□□□□□ -0.51
APOC1-201ENST00000586638 GABPAQ06546 454 aa11.84□□□□□ -0.51
APOC1-201ENST00000586638 NTRK3Q16288 839 aa11.84□□□□□ -0.51
APOC1-201ENST00000586638 NBPF9Q3BBW0 867 aa11.84□□□□□ -0.51
APOC1-201ENST00000586638 OTUD7BQ6GQQ9 843 aa11.84□□□□□ -0.51
APOC1-201ENST00000586638 RCSD1Q6JBY9 416 aa11.84□□□□□ -0.51
APOC1-201ENST00000586638 CPLX2Q6PUV4 134 aaKnown RBP11.84□□□□□ -0.51
APOC1-201ENST00000586638 CATIPQ7Z7H3 387 aa11.84□□□□□ -0.51
APOC1-201ENST00000586638 TTC6Q86TZ1 520 aa11.84□□□□□ -0.51
APOC1-201ENST00000586638 ZNF444Q8N0Y2 327 aaPredicted RBP11.84□□□□□ -0.51
APOC1-201ENST00000586638 TMTC2Q8N394 836 aa11.84□□□□□ -0.51
APOC1-201ENST00000586638 OGFOD1Q8N543 542 aa11.84□□□□□ -0.51
APOC1-201ENST00000586638 ZNF296Q8WUU4 475 aaPredicted RBP11.84□□□□□ -0.51
APOC1-201ENST00000586638 IDI2Q9BXS1 227 aa11.84□□□□□ -0.51
APOC1-201ENST00000586638 SLC26A6Q9BXS9 759 aa11.84□□□□□ -0.51
APOC1-201ENST00000586638 GDPD2Q9HCC8 539 aa11.84□□□□□ -0.51
APOC1-201ENST00000586638 IL17RBQ9NRM6 502 aa11.84□□□□□ -0.51
APOC1-201ENST00000586638 TAOK2Q9UL54 1235 aa11.84□□□□□ -0.51
APOC1-201ENST00000586638 STK36Q9NRP7 1315 aa11.84□□□□□ -0.51
APOC1-201ENST00000586638 DDTLA6NHG4 134 aaPredicted RBP11.83□□□□□ -0.52
APOC1-201ENST00000586638 SPDYE2BA6NHP3 402 aa11.83□□□□□ -0.52
APOC1-201ENST00000586638 FAM196BA6NMK8 535 aa11.83□□□□□ -0.52
APOC1-201ENST00000586638 FIBPO43427 364 aa11.83□□□□□ -0.52
APOC1-201ENST00000586638 PLEKHA8P1O95397 391 aa11.83□□□□□ -0.52
APOC1-201ENST00000586638 SPDYE6P0CI01 402 aa11.83□□□□□ -0.52
APOC1-201ENST00000586638 AKR1B1P15121 316 aa11.83□□□□□ -0.52
APOC1-201ENST00000586638 NCLP19338 710 aaKnown RBP11.83□□□□□ -0.52
APOC1-201ENST00000586638 PTMSP20962 102 aa11.83□□□□□ -0.52
APOC1-201ENST00000586638 NF2P35240 595 aa11.83□□□□□ -0.52
APOC1-201ENST00000586638 NT5C2P49902 561 aa11.83□□□□□ -0.52
APOC1-201ENST00000586638 DNM1Q05193 864 aaKnown RBP11.83□□□□□ -0.52
APOC1-201ENST00000586638 PRPF38BQ5VTL8 546 aaKnown RBP11.83□□□□□ -0.52
APOC1-201ENST00000586638 FAM173BQ6P4H8 233 aa11.83□□□□□ -0.52
APOC1-201ENST00000586638 CLEC10AQ8IUN9 316 aa11.83□□□□□ -0.52
APOC1-201ENST00000586638 CMTR1Q8N1G2 835 aaKnown RBP11.83□□□□□ -0.52
APOC1-201ENST00000586638 NEDD1Q8NHV4 660 aa11.83□□□□□ -0.52
APOC1-201ENST00000586638 C8orf76Q96K31 380 aa11.83□□□□□ -0.52
APOC1-201ENST00000586638 PRMT6Q96LA8 375 aaPredicted RBP11.83□□□□□ -0.52
APOC1-201ENST00000586638 ALG1Q9BT22 464 aa11.83□□□□□ -0.52
APOC1-201ENST00000586638 DNAJC18Q9H819 358 aa11.83□□□□□ -0.52
APOC1-201ENST00000586638 KAT14Q9H8E8 782 aa11.83□□□□□ -0.52
APOC1-201ENST00000586638 ZNF287Q9HBT7 754 aa11.83□□□□□ -0.52
APOC1-201ENST00000586638 LMBRD1Q9NUN5 540 aa11.83□□□□□ -0.52
APOC1-201ENST00000586638 SERPINB13Q9UIV8 391 aa11.83□□□□□ -0.52
APOC1-201ENST00000586638 CNTNAP5Q8WYK1 1306 aa11.83□□□□□ -0.52
APOC1-201ENST00000586638 ATAD5Q96QE3 1844 aa11.82□□□□□ -0.52
APOC1-201ENST00000586638 TCP10L2B9ZVM9 353 aa11.82□□□□□ -0.52
APOC1-201ENST00000586638 GPR25O00155 361 aa11.82□□□□□ -0.52
APOC1-201ENST00000586638 TRAK2O60296 914 aa11.82□□□□□ -0.52
APOC1-201ENST00000586638 FMNL1O95466 1100 aaPredicted RBP11.82□□□□□ -0.52
APOC1-201ENST00000586638 IFNAR1P17181 557 aa11.82□□□□□ -0.52
APOC1-201ENST00000586638 SHMT1P34896 483 aa11.82□□□□□ -0.52
APOC1-201ENST00000586638 SSRP1Q08945 709 aaKnown RBP11.82□□□□□ -0.52
APOC1-201ENST00000586638 DLGAP5Q15398 846 aa11.82□□□□□ -0.52
APOC1-201ENST00000586638 CCDC178Q5BJE1 867 aa11.82□□□□□ -0.52
APOC1-201ENST00000586638 SH3BP5LQ7L8J4 393 aa11.82□□□□□ -0.52
APOC1-201ENST00000586638 RASGRP2Q7LDG7 609 aa11.82□□□□□ -0.52
APOC1-201ENST00000586638 FANCBQ8NB91 859 aa11.82□□□□□ -0.52
APOC1-201ENST00000586638 EHD4Q9H223 541 aa11.82□□□□□ -0.52
APOC1-201ENST00000586638 GJB4Q9NTQ9 266 aa11.82□□□□□ -0.52
APOC1-201ENST00000586638 TCP11L1Q9NUJ3 509 aa11.82□□□□□ -0.52
APOC1-201ENST00000586638 TMOD2Q9NZR1 351 aa11.82□□□□□ -0.52
APOC1-201ENST00000586638 ZNF70Q9UC06 446 aaPredicted RBP11.82□□□□□ -0.52
APOC1-201ENST00000586638 SWAP70Q9UH65 585 aa11.82□□□□□ -0.52
APOC1-201ENST00000586638 POLR2AP24928 1970 aaKnown RBP11.81□□□□□ -0.52
APOC1-201ENST00000586638 WNT10BO00744 389 aa11.81□□□□□ -0.52
APOC1-201ENST00000586638 ENTPD3O75355 529 aa11.81□□□□□ -0.52
APOC1-201ENST00000586638 PRPF40AO75400 957 aaKnown RBP11.81□□□□□ -0.52
APOC1-201ENST00000586638 CALM1P0DP23 149 aa11.81□□□□□ -0.52
APOC1-201ENST00000586638 CALM2P0DP24 149 aa11.81□□□□□ -0.52
APOC1-201ENST00000586638 CALM3P0DP25 149 aa11.81□□□□□ -0.52
APOC1-201ENST00000586638 PDIA4P13667 645 aaKnown RBP11.81□□□□□ -0.52
APOC1-201ENST00000586638 GUCY1A2P33402 732 aa11.81□□□□□ -0.52
APOC1-201ENST00000586638 MMP14P50281 582 aa11.81□□□□□ -0.52
APOC1-201ENST00000586638 TROAPQ12815 778 aa11.81□□□□□ -0.52
APOC1-201ENST00000586638 MKRN3Q13064 507 aaKnown RBP11.81□□□□□ -0.52
APOC1-201ENST00000586638 SPDYE2Q495Y8 402 aa11.81□□□□□ -0.52
APOC1-201ENST00000586638 NOM1Q5C9Z4 860 aaKnown RBP11.81□□□□□ -0.52
APOC1-201ENST00000586638 TMTC3Q6ZXV5 915 aa11.81□□□□□ -0.52
APOC1-201ENST00000586638 ARMC9Q7Z3E5 817 aa11.81□□□□□ -0.52
APOC1-201ENST00000586638 NBPF11Q86T75 865 aa11.81□□□□□ -0.52
APOC1-201ENST00000586638 DGKHQ86XP1 1220 aa11.81□□□□□ -0.52
APOC1-201ENST00000586638 ZSCAN29Q8IWY8 852 aaPredicted RBP11.81□□□□□ -0.52
APOC1-201ENST00000586638 CCDC82Q8N4S0 544 aa11.81□□□□□ -0.52
APOC1-201ENST00000586638 CRACR2BQ8N4Y2 399 aaPredicted RBP11.81□□□□□ -0.52
APOC1-201ENST00000586638 PNMA1Q8ND90 353 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms