RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 NMT2O60551 498 aa22.56■■□□□ 1.2
DDX39A-204ENST00000586558 DGKHQ86XP1 1220 aa22.56■■□□□ 1.2
DDX39A-204ENST00000586558 MB21D2Q8IYB1 491 aaPredicted RBP22.56■■□□□ 1.2
DDX39A-204ENST00000586558 RASEFQ8IZ41 740 aa22.56■■□□□ 1.2
DDX39A-204ENST00000586558 FAM43AQ8N2R8 423 aa22.56■■□□□ 1.2
DDX39A-204ENST00000586558 NKX2-3Q8TAU0 364 aa22.56■■□□□ 1.2
DDX39A-204ENST00000586558 ZSCAN10Q96SZ4 725 aaPredicted RBP22.56■■□□□ 1.2
DDX39A-204ENST00000586558 CFHR5Q9BXR6 569 aa22.56■■□□□ 1.2
DDX39A-204ENST00000586558 PDHXO00330 501 aa22.55■■□□□ 1.2
DDX39A-204ENST00000586558 TOP1P11387 765 aaKnown RBP22.55■■□□□ 1.2
DDX39A-204ENST00000586558 VCAM1P19320 739 aa22.55■■□□□ 1.2
DDX39A-204ENST00000586558 SART3Q15020 963 aaKnown RBP22.55■■□□□ 1.2
DDX39A-204ENST00000586558 GMCL1P1Q8NEA9 526 aa22.55■■□□□ 1.2
DDX39A-204ENST00000586558 MTA3Q9BTC8 594 aa22.55■■□□□ 1.2
DDX39A-204ENST00000586558 RNF186Q9NXI6 227 aa22.55■■□□□ 1.2
DDX39A-204ENST00000586558 HOXA7P31268 230 aaPredicted RBP22.54■■□□□ 1.2
DDX39A-204ENST00000586558 MCM5P33992 734 aa22.54■■□□□ 1.2
DDX39A-204ENST00000586558 TREML2Q5T2D2 321 aa22.54■■□□□ 1.2
DDX39A-204ENST00000586558 RCSD1Q6JBY9 416 aa22.54■■□□□ 1.2
DDX39A-204ENST00000586558 CYB5R4Q7L1T6 521 aa22.54■■□□□ 1.2
DDX39A-204ENST00000586558 ANKS1AQ92625 1134 aa22.54■■□□□ 1.2
DDX39A-204ENST00000586558 PNMA3Q9UL41 463 aa22.54■■□□□ 1.2
DDX39A-204ENST00000586558 SNX14Q9Y5W7 946 aa22.54■■□□□ 1.2
DDX39A-204ENST00000586558 TNKSO95271 1327 aa22.54■■□□□ 1.2
DDX39A-204ENST00000586558 WDR46O15213 610 aaKnown RBP22.53■■□□□ 1.2
DDX39A-204ENST00000586558 HMGB1P09429 215 aaKnown RBP22.53■■□□□ 1.2
DDX39A-204ENST00000586558 DGKZQ13574 1117 aa22.53■■□□□ 1.2
DDX39A-204ENST00000586558 TAF1CQ15572 869 aaPredicted RBP22.53■■□□□ 1.2
DDX39A-204ENST00000586558 LRRC47Q8N1G4 583 aaKnown RBP22.53■■□□□ 1.2
DDX39A-204ENST00000586558 ENAHQ8N8S7 591 aaPredicted RBP22.53■■□□□ 1.2
DDX39A-204ENST00000586558 NEK1Q96PY6 1258 aa22.53■■□□□ 1.2
DDX39A-204ENST00000586558 PARK7Q99497 189 aaKnown RBP22.53■■□□□ 1.2
DDX39A-204ENST00000586558 ZKSCAN3Q9BRR0 538 aa22.53■■□□□ 1.2
DDX39A-204ENST00000586558 ERICH2A1L162 156 aa22.52■■□□□ 1.2
DDX39A-204ENST00000586558 USP17L15C9J2P7 530 aa22.52■■□□□ 1.2
DDX39A-204ENST00000586558 USP17L13C9JLJ4 530 aa22.52■■□□□ 1.2
DDX39A-204ENST00000586558 USP17L11C9JVI0 530 aa22.52■■□□□ 1.2
DDX39A-204ENST00000586558 USP17L18D6R9N7 530 aa22.52■■□□□ 1.2
DDX39A-204ENST00000586558 USP17L22D6RA61 530 aa22.52■■□□□ 1.2
DDX39A-204ENST00000586558 USP17L17D6RBQ6 530 aa22.52■■□□□ 1.2
DDX39A-204ENST00000586558 USP17L19D6RCP7 530 aa22.52■■□□□ 1.2
DDX39A-204ENST00000586558 USP17L20D6RJB6 530 aa22.52■■□□□ 1.2
DDX39A-204ENST00000586558 F5H6K3 240 aa22.52■■□□□ 1.2
DDX39A-204ENST00000586558 TRPA1O75762 1119 aa22.52■■□□□ 1.2
DDX39A-204ENST00000586558 KLRC3Q07444 240 aa22.52■■□□□ 1.2
DDX39A-204ENST00000586558 USP17L24Q0WX57 530 aa22.52■■□□□ 1.2
DDX39A-204ENST00000586558 TMEM47Q9BQJ4 181 aa22.52■■□□□ 1.2
DDX39A-204ENST00000586558 ZFYVE28Q9HCC9 887 aa22.52■■□□□ 1.2
DDX39A-204ENST00000586558 WDR19Q8NEZ3 1342 aa22.52■■□□□ 1.2
DDX39A-204ENST00000586558 SEC24BO95487 1268 aa22.51■■□□□ 1.19
DDX39A-204ENST00000586558 NDUFB10O96000 172 aa22.51■■□□□ 1.19
DDX39A-204ENST00000586558 OSBPP22059 807 aa22.51■■□□□ 1.19
DDX39A-204ENST00000586558 ANTXR2P58335 489 aa22.51■■□□□ 1.19
DDX39A-204ENST00000586558 IRX3P78415 501 aaPredicted RBP22.51■■□□□ 1.19
DDX39A-204ENST00000586558 KIAA1755Q5JYT7 1200 aa22.51■■□□□ 1.19
DDX39A-204ENST00000586558 SPICE1Q8N0Z3 855 aa22.51■■□□□ 1.19
DDX39A-204ENST00000586558 RPAP3Q9H6T3 665 aaPredicted RBP22.51■■□□□ 1.19
DDX39A-204ENST00000586558 IFIT3O14879 490 aaKnown RBP22.5■■□□□ 1.19
DDX39A-204ENST00000586558 PRC1O43663 620 aa22.5■■□□□ 1.19
DDX39A-204ENST00000586558 PSMA5P28066 241 aa22.5■■□□□ 1.19
DDX39A-204ENST00000586558 ANAPC15P60006 121 aa22.5■■□□□ 1.19
DDX39A-204ENST00000586558 CRHR2Q13324 411 aa22.5■■□□□ 1.19
DDX39A-204ENST00000586558 SEC23AQ15436 765 aa22.5■■□□□ 1.19
DDX39A-204ENST00000586558 ADCK5Q3MIX3 580 aa22.5■■□□□ 1.19
DDX39A-204ENST00000586558 GMCL1Q96IK5 515 aa22.5■■□□□ 1.19
DDX39A-204ENST00000586558 TMEM87BQ96K49 555 aa22.5■■□□□ 1.19
DDX39A-204ENST00000586558 ASCC2Q9H1I8 757 aaPredicted RBP22.5■■□□□ 1.19
DDX39A-204ENST00000586558 KAT14Q9H8E8 782 aa22.5■■□□□ 1.19
DDX39A-204ENST00000586558 RAD21O60216 631 aa22.49■■□□□ 1.19
DDX39A-204ENST00000586558 TMEM67Q5HYA8 995 aa22.49■■□□□ 1.19
DDX39A-204ENST00000586558 IFIT1BQ5T764 474 aaKnown RBP22.49■■□□□ 1.19
DDX39A-204ENST00000586558 SLFN13Q68D06 897 aa22.49■■□□□ 1.19
DDX39A-204ENST00000586558 CATSPERGQ6ZRH7 1159 aa22.49■■□□□ 1.19
DDX39A-204ENST00000586558 DHX32Q7L7V1 743 aaKnown RBP22.49■■□□□ 1.19
DDX39A-204ENST00000586558 JAKMIP1Q96N16 626 aaKnown RBP22.49■■□□□ 1.19
DDX39A-204ENST00000586558 TANGO6Q9C0B7 1094 aa22.49■■□□□ 1.19
DDX39A-204ENST00000586558 MYH4Q9Y623 1939 aa22.49■■□□□ 1.19
DDX39A-204ENST00000586558 HSPA1AP0DMV8 641 aaKnown RBP22.48■■□□□ 1.19
DDX39A-204ENST00000586558 HSPA1BP0DMV9 641 aaKnown RBP22.48■■□□□ 1.19
DDX39A-204ENST00000586558 NOM1Q5C9Z4 860 aaKnown RBP22.48■■□□□ 1.19
DDX39A-204ENST00000586558 SMCR8Q8TEV9 937 aaPredicted RBP22.48■■□□□ 1.19
DDX39A-204ENST00000586558 GTF3C2Q8WUA4 911 aaPredicted RBP22.48■■□□□ 1.19
DDX39A-204ENST00000586558 DCAF4Q8WV16 495 aa22.48■■□□□ 1.19
DDX39A-204ENST00000586558 TM6SF1Q9BZW5 370 aa22.48■■□□□ 1.19
DDX39A-204ENST00000586558 TLR2O60603 784 aa22.47■■□□□ 1.19
DDX39A-204ENST00000586558 CYP2C8P10632 490 aa22.47■■□□□ 1.19
DDX39A-204ENST00000586558 WTAPQ15007 396 aa22.47■■□□□ 1.19
DDX39A-204ENST00000586558 FAM83BQ5T0W9 1011 aa22.47■■□□□ 1.19
DDX39A-204ENST00000586558 BLOC1S2Q6QNY1 142 aa22.47■■□□□ 1.19
DDX39A-204ENST00000586558 CHST3Q7LGC8 479 aa22.47■■□□□ 1.19
DDX39A-204ENST00000586558 TMTC2Q8N394 836 aa22.47■■□□□ 1.19
DDX39A-204ENST00000586558 PNMA1Q8ND90 353 aa22.47■■□□□ 1.19
DDX39A-204ENST00000586558 IGDCC4Q8TDY8 1250 aa22.47■■□□□ 1.19
DDX39A-204ENST00000586558 MYPNQ86TC9 1320 aa22.47■■□□□ 1.19
DDX39A-204ENST00000586558 ADGRA2Q96PE1 1338 aa22.47■■□□□ 1.19
DDX39A-204ENST00000586558 TBC1D8O95759 1140 aa22.46■■□□□ 1.19
DDX39A-204ENST00000586558 BMP3P12645 472 aa22.46■■□□□ 1.19
DDX39A-204ENST00000586558 SLC1A4P43007 532 aa22.46■■□□□ 1.19
DDX39A-204ENST00000586558 GCLCP48506 637 aaPredicted RBP22.46■■□□□ 1.19
DDX39A-204ENST00000586558 EXOSC10Q01780 885 aaKnown RBP22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms