RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 PTH1RQ03431 593 aa19.05■□□□□ 0.64
ATG4D-205ENST00000586477 PDE4BQ07343 736 aa19.05■□□□□ 0.64
ATG4D-205ENST00000586477 SLC9C1Q4G0N8 1177 aa19.05■□□□□ 0.64
ATG4D-205ENST00000586477 USP17L2Q6R6M4 530 aa19.05■□□□□ 0.64
ATG4D-205ENST00000586477 SIAH1Q8IUQ4 282 aa19.05■□□□□ 0.64
ATG4D-205ENST00000586477 TXNRD2Q9NNW7 524 aa19.05■□□□□ 0.64
ATG4D-205ENST00000586477 TMOD4Q9NZQ9 345 aa19.05■□□□□ 0.64
ATG4D-205ENST00000586477 SWAP70Q9UH65 585 aa19.05■□□□□ 0.64
ATG4D-205ENST00000586477 ANAPC4Q9UJX5 808 aa19.05■□□□□ 0.64
ATG4D-205ENST00000586477 RLFQ13129 1914 aa19.05■□□□□ 0.64
ATG4D-205ENST00000586477 MINDY4BA8MYZ0 360 aa19.04■□□□□ 0.64
ATG4D-205ENST00000586477 FOXP2O15409 715 aa19.04■□□□□ 0.64
ATG4D-205ENST00000586477 AKR1B1P15121 316 aa19.04■□□□□ 0.64
ATG4D-205ENST00000586477 PPARAQ07869 468 aa19.04■□□□□ 0.64
ATG4D-205ENST00000586477 PABPC4Q13310 644 aaKnown RBP eCLIP19.04■□□□□ 0.64
ATG4D-205ENST00000586477 KRT32Q14532 448 aa19.04■□□□□ 0.64
ATG4D-205ENST00000586477 ZYXQ15942 572 aaKnown RBP19.04■□□□□ 0.64
ATG4D-205ENST00000586477 CLEC10AQ8IUN9 316 aa19.04■□□□□ 0.64
ATG4D-205ENST00000586477 TMEM106CQ9BVX2 250 aa19.04■□□□□ 0.64
ATG4D-205ENST00000586477 USP26Q9BXU7 913 aa19.04■□□□□ 0.64
ATG4D-205ENST00000586477 KIAA1683Q9H0B3 1180 aa19.04■□□□□ 0.64
ATG4D-205ENST00000586477 MORF4L1Q9UBU8 362 aa19.04■□□□□ 0.64
ATG4D-205ENST00000586477 ROBO3Q96MS0 1386 aa19.04■□□□□ 0.64
ATG4D-205ENST00000586477 GCLCP48506 637 aaPredicted RBP19.03■□□□□ 0.64
ATG4D-205ENST00000586477 CDK8P49336 464 aa19.03■□□□□ 0.64
ATG4D-205ENST00000586477 HERVK_113P62684 666 aa19.03■□□□□ 0.64
ATG4D-205ENST00000586477 PRPF38BQ5VTL8 546 aaKnown RBP19.03■□□□□ 0.64
ATG4D-205ENST00000586477 C16orf86Q6ZW13 317 aa19.03■□□□□ 0.64
ATG4D-205ENST00000586477 CNNM2Q9H8M5 875 aa19.03■□□□□ 0.64
ATG4D-205ENST00000586477 RBPJLQ9UBG7 517 aa19.03■□□□□ 0.64
ATG4D-205ENST00000586477 HSPA4P34932 840 aa19.02■□□□□ 0.64
ATG4D-205ENST00000586477 TRDNQ13061 729 aa19.02■□□□□ 0.64
ATG4D-205ENST00000586477 NECTIN1Q15223 517 aa19.02■□□□□ 0.64
ATG4D-205ENST00000586477 MTFR1Q15390 333 aa19.02■□□□□ 0.64
ATG4D-205ENST00000586477 KIAA1755Q5JYT7 1200 aa19.02■□□□□ 0.64
ATG4D-205ENST00000586477 CABP5Q9NP86 173 aa19.02■□□□□ 0.64
ATG4D-205ENST00000586477 PARP14Q460N5 1801 aa19.02■□□□□ 0.63
ATG4D-205ENST00000586477 MYCP01106 439 aaPredicted RBP19.01■□□□□ 0.63
ATG4D-205ENST00000586477 VCAM1P19320 739 aa19.01■□□□□ 0.63
ATG4D-205ENST00000586477 EN2P19622 333 aaPredicted RBP19.01■□□□□ 0.63
ATG4D-205ENST00000586477 HOXD10P28358 340 aa19.01■□□□□ 0.63
ATG4D-205ENST00000586477 FLT3LGP49771 235 aa19.01■□□□□ 0.63
ATG4D-205ENST00000586477 ANAPC15P60006 121 aa19.01■□□□□ 0.63
ATG4D-205ENST00000586477 IRX3P78415 501 aaPredicted RBP19.01■□□□□ 0.63
ATG4D-205ENST00000586477 CREB3L3Q68CJ9 461 aa19.01■□□□□ 0.63
ATG4D-205ENST00000586477 MPHOSPH10O00566 681 aaKnown RBP19■□□□□ 0.63
ATG4D-205ENST00000586477 TNPO2O14787 897 aaKnown RBP19■□□□□ 0.63
ATG4D-205ENST00000586477 CNMDO75829 334 aa19■□□□□ 0.63
ATG4D-205ENST00000586477 GRK4P32298 578 aa19■□□□□ 0.63
ATG4D-205ENST00000586477 Q3C1V9 767 aa19■□□□□ 0.63
ATG4D-205ENST00000586477 AKNAD1Q5T1N1 836 aa19■□□□□ 0.63
ATG4D-205ENST00000586477 MFSD6Q6ZSS7 791 aa19■□□□□ 0.63
ATG4D-205ENST00000586477 TMEM179Q6ZVK1 233 aa19■□□□□ 0.63
ATG4D-205ENST00000586477 RAET1EQ8TD07 263 aa19■□□□□ 0.63
ATG4D-205ENST00000586477 FEZ1Q99689 392 aa19■□□□□ 0.63
ATG4D-205ENST00000586477 GNL3Q9BVP2 549 aaKnown RBP eCLIP19■□□□□ 0.63
ATG4D-205ENST00000586477 KRT23Q9C075 422 aa19■□□□□ 0.63
ATG4D-205ENST00000586477 MKNK2Q9HBH9 465 aa19■□□□□ 0.63
ATG4D-205ENST00000586477 GJD2Q9UKL4 321 aa19■□□□□ 0.63
ATG4D-205ENST00000586477 SLC27A2O14975 620 aa18.99■□□□□ 0.63
ATG4D-205ENST00000586477 SLC34A2O95436 690 aa18.99■□□□□ 0.63
ATG4D-205ENST00000586477 CYP21A2P08686 494 aa18.99■□□□□ 0.63
ATG4D-205ENST00000586477 USP14P54578 494 aa18.99■□□□□ 0.63
ATG4D-205ENST00000586477 TSGA10IPQ3SY00 556 aa18.99■□□□□ 0.63
ATG4D-205ENST00000586477 CATSPERGQ6ZRH7 1159 aa18.99■□□□□ 0.63
ATG4D-205ENST00000586477 IL27Q8NEV9 243 aa18.99■□□□□ 0.63
ATG4D-205ENST00000586477 STAG1Q8WVM7 1258 aa18.99■□□□□ 0.63
ATG4D-205ENST00000586477 CCDC17Q96LX7 622 aa18.99■□□□□ 0.63
ATG4D-205ENST00000586477 A0A0G2JMZ2 1700 aa18.98■□□□□ 0.63
ATG4D-205ENST00000586477 USP17L15C9J2P7 530 aa18.98■□□□□ 0.63
ATG4D-205ENST00000586477 USP17L13C9JLJ4 530 aa18.98■□□□□ 0.63
ATG4D-205ENST00000586477 USP17L11C9JVI0 530 aa18.98■□□□□ 0.63
ATG4D-205ENST00000586477 USP17L18D6R9N7 530 aa18.98■□□□□ 0.63
ATG4D-205ENST00000586477 USP17L22D6RA61 530 aa18.98■□□□□ 0.63
ATG4D-205ENST00000586477 USP17L17D6RBQ6 530 aa18.98■□□□□ 0.63
ATG4D-205ENST00000586477 USP17L19D6RCP7 530 aa18.98■□□□□ 0.63
ATG4D-205ENST00000586477 USP17L20D6RJB6 530 aa18.98■□□□□ 0.63
ATG4D-205ENST00000586477 SEC24BO95487 1268 aa18.98■□□□□ 0.63
ATG4D-205ENST00000586477 HMGB1P09429 215 aaKnown RBP18.98■□□□□ 0.63
ATG4D-205ENST00000586477 ELNP15502 786 aa18.98■□□□□ 0.63
ATG4D-205ENST00000586477 PSMA5P28066 241 aa18.98■□□□□ 0.63
ATG4D-205ENST00000586477 HAND2P61296 217 aa18.98■□□□□ 0.63
ATG4D-205ENST00000586477 USP17L24Q0WX57 530 aa18.98■□□□□ 0.63
ATG4D-205ENST00000586477 IRF5Q13568 498 aa18.98■□□□□ 0.63
ATG4D-205ENST00000586477 RALYLQ86SE5 291 aaKnown RBP18.98■□□□□ 0.63
ATG4D-205ENST00000586477 KCNB2Q92953 911 aa18.98■□□□□ 0.63
ATG4D-205ENST00000586477 C22orf23Q9BZE7 217 aa18.98■□□□□ 0.63
ATG4D-205ENST00000586477 ORC4O43929 436 aa18.97■□□□□ 0.63
ATG4D-205ENST00000586477 ADCY3O60266 1144 aa18.97■□□□□ 0.63
ATG4D-205ENST00000586477 FGRP09769 529 aa18.97■□□□□ 0.63
ATG4D-205ENST00000586477 RASA1P20936 1047 aa18.97■□□□□ 0.63
ATG4D-205ENST00000586477 ERVK-9P63128 1117 aa18.97■□□□□ 0.63
ATG4D-205ENST00000586477 ERVK-24P63145 666 aa18.97■□□□□ 0.63
ATG4D-205ENST00000586477 PPP4R3BQ5MIZ7 849 aa18.97■□□□□ 0.63
ATG4D-205ENST00000586477 ZNF444Q8N0Y2 327 aaPredicted RBP18.97■□□□□ 0.63
ATG4D-205ENST00000586477 NCOA7Q8NI08 942 aa18.97■□□□□ 0.63
ATG4D-205ENST00000586477 ESR2Q92731 530 aa18.97■□□□□ 0.63
ATG4D-205ENST00000586477 SHISA4Q96DD7 197 aa18.97■□□□□ 0.63
ATG4D-205ENST00000586477 PORCNQ9H237 461 aa18.97■□□□□ 0.63
ATG4D-205ENST00000586477 RPAP3Q9H6T3 665 aaPredicted RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms