RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 RAD21O60216 631 aa15.98■□□□□ 0.15
VMP1-203ENST00000586245 SEC23AQ15436 765 aa15.98■□□□□ 0.15
VMP1-203ENST00000586245 RCSD1Q6JBY9 416 aa15.98■□□□□ 0.15
VMP1-203ENST00000586245 USP17L2Q6R6M4 530 aa15.98■□□□□ 0.15
VMP1-203ENST00000586245 NFXL1Q6ZNB6 911 aa15.98■□□□□ 0.15
VMP1-203ENST00000586245 LRRC47Q8N1G4 583 aaKnown RBP15.98■□□□□ 0.15
VMP1-203ENST00000586245 IGDCC4Q8TDY8 1250 aa15.98■□□□□ 0.15
VMP1-203ENST00000586245 ANKS1AQ92625 1134 aa15.98■□□□□ 0.15
VMP1-203ENST00000586245 TMEM47Q9BQJ4 181 aa15.98■□□□□ 0.15
VMP1-203ENST00000586245 PDRG1Q9NUG6 133 aa15.98■□□□□ 0.15
VMP1-203ENST00000586245 PHIPQ8WWQ0 1821 aa15.97■□□□□ 0.15
VMP1-203ENST00000586245 A0A0G2JLL6 359 aaPredicted RBP15.97■□□□□ 0.15
VMP1-203ENST00000586245 MANSC4A6NHS7 340 aaPredicted RBP15.97■□□□□ 0.15
VMP1-203ENST00000586245 CCDC69A6NI79 296 aa15.97■□□□□ 0.15
VMP1-203ENST00000586245 FAM155AB1AL88 458 aaPredicted RBP15.97■□□□□ 0.15
VMP1-203ENST00000586245 CETPP11597 493 aa15.97■□□□□ 0.15
VMP1-203ENST00000586245 LIFRP42702 1097 aa15.97■□□□□ 0.15
VMP1-203ENST00000586245 HMGCS2P54868 508 aa15.97■□□□□ 0.15
VMP1-203ENST00000586245 NOGQ13253 232 aa15.97■□□□□ 0.15
VMP1-203ENST00000586245 SH3D19Q5HYK7 790 aa15.97■□□□□ 0.15
VMP1-203ENST00000586245 GADL1Q6ZQY3 521 aa15.97■□□□□ 0.15
VMP1-203ENST00000586245 Q6ZUG5 572 aa15.97■□□□□ 0.15
VMP1-203ENST00000586245 FASTKD5Q7L8L6 764 aaKnown RBP15.97■□□□□ 0.15
VMP1-203ENST00000586245 PRRT2Q7Z6L0 340 aaPredicted RBP15.97■□□□□ 0.15
VMP1-203ENST00000586245 VCPKMTQ9H867 229 aa15.97■□□□□ 0.15
VMP1-203ENST00000586245 LY9Q9HBG7 655 aa15.97■□□□□ 0.15
VMP1-203ENST00000586245 F5H6K3 240 aa15.96■□□□□ 0.15
VMP1-203ENST00000586245 NEK4P51957 841 aa15.96■□□□□ 0.15
VMP1-203ENST00000586245 KLRC3Q07444 240 aa15.96■□□□□ 0.15
VMP1-203ENST00000586245 RABEP1Q15276 862 aa15.96■□□□□ 0.15
VMP1-203ENST00000586245 PROCA1Q8NCQ7 364 aaPredicted RBP15.96■□□□□ 0.15
VMP1-203ENST00000586245 PNMA1Q8ND90 353 aa15.96■□□□□ 0.15
VMP1-203ENST00000586245 GMCL1P1Q8NEA9 526 aa15.96■□□□□ 0.15
VMP1-203ENST00000586245 GPHNQ9NQX3 736 aaPredicted RBP15.96■□□□□ 0.15
VMP1-203ENST00000586245 MTMR7Q9Y216 660 aa15.96■□□□□ 0.15
VMP1-203ENST00000586245 WDR33Q9C0J8 1336 aaKnown RBP15.95■□□□□ 0.14
VMP1-203ENST00000586245 CCL15-CCL14A0A0B4J2E2 113 aa15.95■□□□□ 0.14
VMP1-203ENST00000586245 INHBEP58166 350 aa15.95■□□□□ 0.14
VMP1-203ENST00000586245 SREBF2Q12772 1141 aa15.95■□□□□ 0.14
VMP1-203ENST00000586245 ANKRD1Q15327 319 aa15.95■□□□□ 0.14
VMP1-203ENST00000586245 CCL15Q16663 113 aa15.95■□□□□ 0.14
VMP1-203ENST00000586245 SLFN13Q68D06 897 aa15.95■□□□□ 0.14
VMP1-203ENST00000586245 SYNE3Q6ZMZ3 975 aa15.95■□□□□ 0.14
VMP1-203ENST00000586245 CATIPQ7Z7H3 387 aa15.95■□□□□ 0.14
VMP1-203ENST00000586245 LPAR1Q92633 364 aa15.95■□□□□ 0.14
VMP1-203ENST00000586245 MS4A4AQ96JQ5 239 aa15.95■□□□□ 0.14
VMP1-203ENST00000586245 C12orf42Q96LP6 360 aa15.95■□□□□ 0.14
VMP1-203ENST00000586245 KIF2CQ99661 725 aa15.95■□□□□ 0.14
VMP1-203ENST00000586245 EMILIN3Q9NT22 766 aa15.95■□□□□ 0.14
VMP1-203ENST00000586245 MYH4Q9Y623 1939 aa15.94■□□□□ 0.14
VMP1-203ENST00000586245 NDUFB10O96000 172 aa15.94■□□□□ 0.14
VMP1-203ENST00000586245 VEGFBP49765 207 aa15.94■□□□□ 0.14
VMP1-203ENST00000586245 REM2Q8IYK8 340 aaPredicted RBP15.94■□□□□ 0.14
VMP1-203ENST00000586245 SPICE1Q8N0Z3 855 aa15.94■□□□□ 0.14
VMP1-203ENST00000586245 FBXL16Q8N461 479 aa15.94■□□□□ 0.14
VMP1-203ENST00000586245 IL27Q8NEV9 243 aa15.94■□□□□ 0.14
VMP1-203ENST00000586245 BRF1Q92994 677 aa15.94■□□□□ 0.14
VMP1-203ENST00000586245 SENP2Q9HC62 589 aa15.94■□□□□ 0.14
VMP1-203ENST00000586245 ISY1Q9ULR0 285 aaKnown RBP15.94■□□□□ 0.14
VMP1-203ENST00000586245 NAP1L2Q9ULW6 460 aaPredicted RBP15.94■□□□□ 0.14
VMP1-203ENST00000586245 SLC12A7Q9Y666 1083 aa15.94■□□□□ 0.14
VMP1-203ENST00000586245 KLF18A0A0U1RQI7 1052 aa15.93■□□□□ 0.14
VMP1-203ENST00000586245 WDR46O15213 610 aaKnown RBP15.93■□□□□ 0.14
VMP1-203ENST00000586245 AOC2O75106 756 aa15.93■□□□□ 0.14
VMP1-203ENST00000586245 VCAM1P19320 739 aa15.93■□□□□ 0.14
VMP1-203ENST00000586245 SLC1A4P43007 532 aa15.93■□□□□ 0.14
VMP1-203ENST00000586245 KIF23Q02241 960 aaPredicted RBP15.93■□□□□ 0.14
VMP1-203ENST00000586245 PABPC4Q13310 644 aaKnown RBP eCLIP15.93■□□□□ 0.14
VMP1-203ENST00000586245 DGKZQ13574 1117 aa15.93■□□□□ 0.14
VMP1-203ENST00000586245 CCDC96Q2M329 555 aa15.93■□□□□ 0.14
VMP1-203ENST00000586245 SGMS1Q86VZ5 419 aa15.93■□□□□ 0.14
VMP1-203ENST00000586245 ZNF654Q8IZM8 581 aa15.93■□□□□ 0.14
VMP1-203ENST00000586245 DCAF4Q8WV16 495 aa15.93■□□□□ 0.14
VMP1-203ENST00000586245 BRI3BPQ8WY22 251 aa15.93■□□□□ 0.14
VMP1-203ENST00000586245 GMCL1Q96IK5 515 aa15.93■□□□□ 0.14
VMP1-203ENST00000586245 AGXT2Q9BYV1 514 aa15.93■□□□□ 0.14
VMP1-203ENST00000586245 ALDH8A1Q9H2A2 487 aaPredicted RBP15.93■□□□□ 0.14
VMP1-203ENST00000586245 AGTPBP1Q9UPW5 1226 aa15.93■□□□□ 0.14
VMP1-203ENST00000586245 TESPA1A2RU30 521 aaPredicted RBP15.92■□□□□ 0.14
VMP1-203ENST00000586245 ST18O60284 1047 aa15.92■□□□□ 0.14
VMP1-203ENST00000586245 DDAH1O94760 285 aa15.92■□□□□ 0.14
VMP1-203ENST00000586245 CALM1P0DP23 149 aa15.92■□□□□ 0.14
VMP1-203ENST00000586245 CALM2P0DP24 149 aa15.92■□□□□ 0.14
VMP1-203ENST00000586245 CALM3P0DP25 149 aa15.92■□□□□ 0.14
VMP1-203ENST00000586245 BMP3P12645 472 aa15.92■□□□□ 0.14
VMP1-203ENST00000586245 MAP2K2P36507 400 aa15.92■□□□□ 0.14
VMP1-203ENST00000586245 APOBRQ0VD83 1088 aa15.92■□□□□ 0.14
VMP1-203ENST00000586245 TOB2Q14106 344 aaPredicted RBP15.92■□□□□ 0.14
VMP1-203ENST00000586245 KIAA1755Q5JYT7 1200 aa15.92■□□□□ 0.14
VMP1-203ENST00000586245 OTUD7BQ6GQQ9 843 aa15.92■□□□□ 0.14
VMP1-203ENST00000586245 NUP133Q8WUM0 1156 aa15.92■□□□□ 0.14
VMP1-203ENST00000586245 CHMP4CQ96CF2 233 aa15.92■□□□□ 0.14
VMP1-203ENST00000586245 RPAP3Q9H6T3 665 aaPredicted RBP15.92■□□□□ 0.14
VMP1-203ENST00000586245 USP17L15C9J2P7 530 aa15.91■□□□□ 0.14
VMP1-203ENST00000586245 BTBD19C9JJ37 291 aa15.91■□□□□ 0.14
VMP1-203ENST00000586245 USP17L13C9JLJ4 530 aa15.91■□□□□ 0.14
VMP1-203ENST00000586245 USP17L11C9JVI0 530 aa15.91■□□□□ 0.14
VMP1-203ENST00000586245 USP17L18D6R9N7 530 aa15.91■□□□□ 0.14
VMP1-203ENST00000586245 USP17L22D6RA61 530 aa15.91■□□□□ 0.14
VMP1-203ENST00000586245 USP17L17D6RBQ6 530 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms