RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 PPARAQ07869 468 aa10.29□□□□□ -0.76
ATG4D-202ENST00000585437 USP17L24Q0WX57 530 aa10.29□□□□□ -0.76
ATG4D-202ENST00000585437 MCMDC2Q4G0Z9 681 aa10.29□□□□□ -0.76
ATG4D-202ENST00000585437 TTC22Q5TAA0 569 aa10.29□□□□□ -0.76
ATG4D-202ENST00000585437 CATSPERGQ6ZRH7 1159 aa10.29□□□□□ -0.76
ATG4D-202ENST00000585437 ZNF333Q96JL9 665 aa10.29□□□□□ -0.76
ATG4D-202ENST00000585437 SH2D4AQ9H788 454 aa10.29□□□□□ -0.76
ATG4D-202ENST00000585437 VCPKMTQ9H867 229 aa10.29□□□□□ -0.76
ATG4D-202ENST00000585437 KANSL2Q9H9L4 492 aa10.29□□□□□ -0.76
ATG4D-202ENST00000585437 ARHGEF10LQ9HCE6 1279 aa10.29□□□□□ -0.76
ATG4D-202ENST00000585437 RBPJLQ9UBG7 517 aa10.29□□□□□ -0.76
ATG4D-202ENST00000585437 MYPNQ86TC9 1320 aa10.29□□□□□ -0.76
ATG4D-202ENST00000585437 KIAA0100Q14667 2235 aaKnown RBP10.28□□□□□ -0.76
ATG4D-202ENST00000585437 SPDYE16A6NNV3 312 aaPredicted RBP10.28□□□□□ -0.76
ATG4D-202ENST00000585437 WDR46O15213 610 aaKnown RBP10.28□□□□□ -0.76
ATG4D-202ENST00000585437 CNMDO75829 334 aa10.28□□□□□ -0.76
ATG4D-202ENST00000585437 FGRP09769 529 aa10.28□□□□□ -0.76
ATG4D-202ENST00000585437 HSPD1P10809 573 aaKnown RBP10.28□□□□□ -0.76
ATG4D-202ENST00000585437 EEF2P13639 858 aaKnown RBP10.28□□□□□ -0.76
ATG4D-202ENST00000585437 PRKCZQ05513 592 aa10.28□□□□□ -0.76
ATG4D-202ENST00000585437 IRF5Q13568 498 aa10.28□□□□□ -0.76
ATG4D-202ENST00000585437 RILPL2Q969X0 211 aa10.28□□□□□ -0.76
ATG4D-202ENST00000585437 RPAP3Q9H6T3 665 aaPredicted RBP10.28□□□□□ -0.76
ATG4D-202ENST00000585437 ZNF287Q9HBT7 754 aa10.28□□□□□ -0.76
ATG4D-202ENST00000585437 NYAP2Q9P242 653 aa10.28□□□□□ -0.76
ATG4D-202ENST00000585437 SYNPO2Q9UMS6 1093 aa10.28□□□□□ -0.76
ATG4D-202ENST00000585437 GABRQQ9UN88 632 aa10.28□□□□□ -0.76
ATG4D-202ENST00000585437 LCTP09848 1927 aa10.27□□□□□ -0.76
ATG4D-202ENST00000585437 HIP1O00291 1037 aa10.27□□□□□ -0.77
ATG4D-202ENST00000585437 TNPO2O14787 897 aaKnown RBP10.27□□□□□ -0.77
ATG4D-202ENST00000585437 PEX10O60683 326 aa10.27□□□□□ -0.77
ATG4D-202ENST00000585437 PRDM1O75626 825 aa10.27□□□□□ -0.77
ATG4D-202ENST00000585437 FMNL1O95466 1100 aaPredicted RBP10.27□□□□□ -0.77
ATG4D-202ENST00000585437 HOXD10P28358 340 aa10.27□□□□□ -0.77
ATG4D-202ENST00000585437 SOX10P56693 466 aa10.27□□□□□ -0.77
ATG4D-202ENST00000585437 ERVK-9P63128 1117 aa10.27□□□□□ -0.77
ATG4D-202ENST00000585437 ERVK-24P63145 666 aa10.27□□□□□ -0.77
ATG4D-202ENST00000585437 PDE4BQ07343 736 aa10.27□□□□□ -0.77
ATG4D-202ENST00000585437 SLC9C1Q4G0N8 1177 aa10.27□□□□□ -0.77
ATG4D-202ENST00000585437 NEDD1Q8NHV4 660 aa10.27□□□□□ -0.77
ATG4D-202ENST00000585437 IL25Q9H293 177 aa10.27□□□□□ -0.77
ATG4D-202ENST00000585437 MKNK2Q9HBH9 465 aa10.27□□□□□ -0.77
ATG4D-202ENST00000585437 RABGAP1Q9Y3P9 1069 aa10.27□□□□□ -0.77
ATG4D-202ENST00000585437 TACC3Q9Y6A5 838 aa10.27□□□□□ -0.77
ATG4D-202ENST00000585437 ALPK3Q96L96 1907 aa10.27□□□□□ -0.77
ATG4D-202ENST00000585437 ORC4O43929 436 aa10.26□□□□□ -0.77
ATG4D-202ENST00000585437 FGAP02671 866 aa10.26□□□□□ -0.77
ATG4D-202ENST00000585437 ANP32AP39687 249 aaKnown RBP10.26□□□□□ -0.77
ATG4D-202ENST00000585437 NOVP48745 357 aa10.26□□□□□ -0.77
ATG4D-202ENST00000585437 FLT3LGP49771 235 aa10.26□□□□□ -0.77
ATG4D-202ENST00000585437 MFAP1P55081 439 aaKnown RBP10.26□□□□□ -0.77
ATG4D-202ENST00000585437 Q3C1V9 767 aa10.26□□□□□ -0.77
ATG4D-202ENST00000585437 SLAIN1Q8ND83 568 aa10.26□□□□□ -0.77
ATG4D-202ENST00000585437 GPRC5AQ8NFJ5 357 aa10.26□□□□□ -0.77
ATG4D-202ENST00000585437 PXYLP1Q8TE99 480 aa10.26□□□□□ -0.77
ATG4D-202ENST00000585437 MKL1Q969V6 931 aa10.26□□□□□ -0.77
ATG4D-202ENST00000585437 CEP95Q96GE4 821 aa10.26□□□□□ -0.77
ATG4D-202ENST00000585437 NBPF3Q9H094 633 aa10.26□□□□□ -0.77
ATG4D-202ENST00000585437 PORCNQ9H237 461 aa10.26□□□□□ -0.77
ATG4D-202ENST00000585437 MTMR4Q9NYA4 1195 aa10.26□□□□□ -0.77
ATG4D-202ENST00000585437 GJD2Q9UKL4 321 aa10.26□□□□□ -0.77
ATG4D-202ENST00000585437 ADAMTS5Q9UNA0 930 aa10.26□□□□□ -0.77
ATG4D-202ENST00000585437 MYH6P13533 1939 aa10.26□□□□□ -0.77
ATG4D-202ENST00000585437 LRRC37A2A6NM11 1700 aa10.26□□□□□ -0.77
ATG4D-202ENST00000585437 RAD50Q92878 1312 aa10.26□□□□□ -0.77
ATG4D-202ENST00000585437 SLC3A2P08195 630 aaKnown RBP10.25□□□□□ -0.77
ATG4D-202ENST00000585437 MAPK4P31152 587 aa10.25□□□□□ -0.77
ATG4D-202ENST00000585437 GRK4P32298 578 aa10.25□□□□□ -0.77
ATG4D-202ENST00000585437 CTDSPL2Q05D32 466 aa10.25□□□□□ -0.77
ATG4D-202ENST00000585437 COG2Q14746 738 aa10.25□□□□□ -0.77
ATG4D-202ENST00000585437 CWC27Q6UX04 472 aaKnown RBP10.25□□□□□ -0.77
ATG4D-202ENST00000585437 NBPF11Q86T75 865 aa10.25□□□□□ -0.77
ATG4D-202ENST00000585437 SPICE1Q8N0Z3 855 aa10.25□□□□□ -0.77
ATG4D-202ENST00000585437 STK11IPQ8N1F8 1099 aa10.25□□□□□ -0.77
ATG4D-202ENST00000585437 RAET1EQ8TD07 263 aa10.25□□□□□ -0.77
ATG4D-202ENST00000585437 SH3TC2Q8TF17 1288 aa10.25□□□□□ -0.77
ATG4D-202ENST00000585437 USP6NLQ92738 828 aa10.25□□□□□ -0.77
ATG4D-202ENST00000585437 COA7Q96BR5 231 aa10.25□□□□□ -0.77
ATG4D-202ENST00000585437 TANGO6Q9C0B7 1094 aa10.25□□□□□ -0.77
ATG4D-202ENST00000585437 GOPCQ9HD26 462 aa10.25□□□□□ -0.77
ATG4D-202ENST00000585437 DIAPH3Q9NSV4 1193 aa10.25□□□□□ -0.77
ATG4D-202ENST00000585437 BTBD7Q9P203 1132 aa10.25□□□□□ -0.77
ATG4D-202ENST00000585437 POTEFA5A3E0 1075 aa10.24□□□□□ -0.77
ATG4D-202ENST00000585437 ECM2O94769 699 aaPredicted RBP10.24□□□□□ -0.77
ATG4D-202ENST00000585437 TTLL1O95922 423 aa10.24□□□□□ -0.77
ATG4D-202ENST00000585437 NDUFB10O96000 172 aa10.24□□□□□ -0.77
ATG4D-202ENST00000585437 TSPY3P0CV98 308 aa10.24□□□□□ -0.77
ATG4D-202ENST00000585437 TSPY8P0CW00 308 aa10.24□□□□□ -0.77
ATG4D-202ENST00000585437 PCP11498 1178 aaKnown RBP10.24□□□□□ -0.77
ATG4D-202ENST00000585437 DSG3P32926 999 aa10.24□□□□□ -0.77
ATG4D-202ENST00000585437 TBC1D10CQ8IV04 446 aa10.24□□□□□ -0.77
ATG4D-202ENST00000585437 ZNF444Q8N0Y2 327 aaPredicted RBP10.24□□□□□ -0.77
ATG4D-202ENST00000585437 MB21D1Q8N884 522 aa10.24□□□□□ -0.77
ATG4D-202ENST00000585437 GMCL1P1Q8NEA9 526 aa10.24□□□□□ -0.77
ATG4D-202ENST00000585437 SOCS4Q8WXH5 440 aa10.24□□□□□ -0.77
ATG4D-202ENST00000585437 PAGR1Q9BTK6 254 aa10.24□□□□□ -0.77
ATG4D-202ENST00000585437 DSCC1Q9BVC3 393 aa10.24□□□□□ -0.77
ATG4D-202ENST00000585437 IL17RBQ9NRM6 502 aa10.24□□□□□ -0.77
ATG4D-202ENST00000585437 HOXC10Q9NYD6 342 aa10.24□□□□□ -0.77
ATG4D-202ENST00000585437 SMCHD1A6NHR9 2005 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms