RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 BRI3BPQ8WY22 251 aa17.13■□□□□ 0.33
SCAMP4-209ENST00000585335 MKL1Q969V6 931 aa17.13■□□□□ 0.33
SCAMP4-209ENST00000585335 C12orf42Q96LP6 360 aa17.13■□□□□ 0.33
SCAMP4-209ENST00000585335 C22orf23Q9BZE7 217 aa17.13■□□□□ 0.33
SCAMP4-209ENST00000585335 VCPKMTQ9H867 229 aa17.13■□□□□ 0.33
SCAMP4-209ENST00000585335 KAT14Q9H8E8 782 aa17.13■□□□□ 0.33
SCAMP4-209ENST00000585335 THSD7BQ9C0I4 1608 aa17.12■□□□□ 0.33
SCAMP4-209ENST00000585335 A0A1W2PRG0 241 aa17.12■□□□□ 0.33
SCAMP4-209ENST00000585335 ALDH1A1P00352 501 aa17.12■□□□□ 0.33
SCAMP4-209ENST00000585335 CASTP20810 708 aaKnown RBP17.12■□□□□ 0.33
SCAMP4-209ENST00000585335 TM4SF4P48230 202 aa17.12■□□□□ 0.33
SCAMP4-209ENST00000585335 NOVP48745 357 aa17.12■□□□□ 0.33
SCAMP4-209ENST00000585335 MAP2K1Q02750 393 aaPredicted RBP17.12■□□□□ 0.33
SCAMP4-209ENST00000585335 WTAPQ15007 396 aa17.12■□□□□ 0.33
SCAMP4-209ENST00000585335 ADCK5Q3MIX3 580 aa17.12■□□□□ 0.33
SCAMP4-209ENST00000585335 ANKRD23Q86SG2 305 aa17.12■□□□□ 0.33
SCAMP4-209ENST00000585335 SIAH1Q8IUQ4 282 aa17.12■□□□□ 0.33
SCAMP4-209ENST00000585335 LRRC47Q8N1G4 583 aaKnown RBP17.12■□□□□ 0.33
SCAMP4-209ENST00000585335 TMTC2Q8N394 836 aa17.12■□□□□ 0.33
SCAMP4-209ENST00000585335 ENAHQ8N8S7 591 aaPredicted RBP17.12■□□□□ 0.33
SCAMP4-209ENST00000585335 GMCL1P1Q8NEA9 526 aa17.12■□□□□ 0.33
SCAMP4-209ENST00000585335 BEGAINQ9BUH8 593 aa17.12■□□□□ 0.33
SCAMP4-209ENST00000585335 TM6SF1Q9BZW5 370 aa17.12■□□□□ 0.33
SCAMP4-209ENST00000585335 ZCCHC17Q9NP64 241 aaKnown RBP17.12■□□□□ 0.33
SCAMP4-209ENST00000585335 AGTPBP1Q9UPW5 1226 aa17.12■□□□□ 0.33
SCAMP4-209ENST00000585335 CYP46A1Q9Y6A2 500 aa17.12■□□□□ 0.33
SCAMP4-209ENST00000585335 MYH4Q9Y623 1939 aa17.11■□□□□ 0.33
SCAMP4-209ENST00000585335 NFXL1Q6ZNB6 911 aa17.11■□□□□ 0.33
SCAMP4-209ENST00000585335 CHST3Q7LGC8 479 aa17.11■□□□□ 0.33
SCAMP4-209ENST00000585335 IFNL1Q8IU54 200 aa17.11■□□□□ 0.33
SCAMP4-209ENST00000585335 DNAJC5GQ8N7S2 189 aa17.11■□□□□ 0.33
SCAMP4-209ENST00000585335 ANKS1AQ92625 1134 aa17.11■□□□□ 0.33
SCAMP4-209ENST00000585335 TMEM47Q9BQJ4 181 aa17.11■□□□□ 0.33
SCAMP4-209ENST00000585335 EMILIN3Q9NT22 766 aa17.11■□□□□ 0.33
SCAMP4-209ENST00000585335 PNMA3Q9UL41 463 aa17.11■□□□□ 0.33
SCAMP4-209ENST00000585335 SLC45A1Q9Y2W3 748 aa17.11■□□□□ 0.33
SCAMP4-209ENST00000585335 LOC285556D6RIA3 1793 aa17.1■□□□□ 0.33
SCAMP4-209ENST00000585335 PTPRFP10586 1907 aa17.1■□□□□ 0.33
SCAMP4-209ENST00000585335 BTBD19C9JJ37 291 aa17.1■□□□□ 0.33
SCAMP4-209ENST00000585335 F5H6K3 240 aa17.1■□□□□ 0.33
SCAMP4-209ENST00000585335 WDR46O15213 610 aaKnown RBP17.1■□□□□ 0.33
SCAMP4-209ENST00000585335 OSBPP22059 807 aa17.1■□□□□ 0.33
SCAMP4-209ENST00000585335 ANTXR2P58335 489 aa17.1■□□□□ 0.33
SCAMP4-209ENST00000585335 KLRC3Q07444 240 aa17.1■□□□□ 0.33
SCAMP4-209ENST00000585335 SLFN13Q68D06 897 aa17.1■□□□□ 0.33
SCAMP4-209ENST00000585335 PNMA1Q8ND90 353 aa17.1■□□□□ 0.33
SCAMP4-209ENST00000585335 ISY1Q9ULR0 285 aaKnown RBP17.1■□□□□ 0.33
SCAMP4-209ENST00000585335 CCDC69A6NI79 296 aa17.09■□□□□ 0.33
SCAMP4-209ENST00000585335 USP17L15C9J2P7 530 aa17.09■□□□□ 0.33
SCAMP4-209ENST00000585335 USP17L13C9JLJ4 530 aa17.09■□□□□ 0.33
SCAMP4-209ENST00000585335 USP17L11C9JVI0 530 aa17.09■□□□□ 0.33
SCAMP4-209ENST00000585335 USP17L18D6R9N7 530 aa17.09■□□□□ 0.33
SCAMP4-209ENST00000585335 USP17L22D6RA61 530 aa17.09■□□□□ 0.33
SCAMP4-209ENST00000585335 USP17L17D6RBQ6 530 aa17.09■□□□□ 0.33
SCAMP4-209ENST00000585335 USP17L19D6RCP7 530 aa17.09■□□□□ 0.33
SCAMP4-209ENST00000585335 USP17L20D6RJB6 530 aa17.09■□□□□ 0.33
SCAMP4-209ENST00000585335 PDHXO00330 501 aa17.09■□□□□ 0.33
SCAMP4-209ENST00000585335 NDUFB10O96000 172 aa17.09■□□□□ 0.33
SCAMP4-209ENST00000585335 VCAM1P19320 739 aa17.09■□□□□ 0.33
SCAMP4-209ENST00000585335 RPS6KB1P23443 525 aa17.09■□□□□ 0.33
SCAMP4-209ENST00000585335 IRX3P78415 501 aaPredicted RBP17.09■□□□□ 0.33
SCAMP4-209ENST00000585335 USP17L24Q0WX57 530 aa17.09■□□□□ 0.33
SCAMP4-209ENST00000585335 SEC23AQ15436 765 aa17.09■□□□□ 0.33
SCAMP4-209ENST00000585335 RCSD1Q6JBY9 416 aa17.09■□□□□ 0.33
SCAMP4-209ENST00000585335 RUFY3Q7L099 469 aa17.09■□□□□ 0.33
SCAMP4-209ENST00000585335 CATIPQ7Z7H3 387 aa17.09■□□□□ 0.33
SCAMP4-209ENST00000585335 SPICE1Q8N0Z3 855 aa17.09■□□□□ 0.33
SCAMP4-209ENST00000585335 NKX2-3Q8TAU0 364 aa17.09■□□□□ 0.33
SCAMP4-209ENST00000585335 DCAF4Q8WV16 495 aa17.09■□□□□ 0.33
SCAMP4-209ENST00000585335 GMCL1Q96IK5 515 aa17.09■□□□□ 0.33
SCAMP4-209ENST00000585335 ZIC5Q96T25 663 aa17.09■□□□□ 0.33
SCAMP4-209ENST00000585335 PARK7Q99497 189 aaKnown RBP17.09■□□□□ 0.33
SCAMP4-209ENST00000585335 TANGO6Q9C0B7 1094 aa17.09■□□□□ 0.33
SCAMP4-209ENST00000585335 ZSWIM6Q9HCJ5 1215 aa17.09■□□□□ 0.33
SCAMP4-209ENST00000585335 SH2B2O14492 632 aaPredicted RBP17.08■□□□□ 0.32
SCAMP4-209ENST00000585335 LIFRP42702 1097 aa17.08■□□□□ 0.32
SCAMP4-209ENST00000585335 SLC1A4P43007 532 aa17.08■□□□□ 0.32
SCAMP4-209ENST00000585335 RBM25P49756 843 aaKnown RBP17.08■□□□□ 0.32
SCAMP4-209ENST00000585335 EXOSC10Q01780 885 aaKnown RBP17.08■□□□□ 0.32
SCAMP4-209ENST00000585335 MOGSQ13724 837 aa17.08■□□□□ 0.32
SCAMP4-209ENST00000585335 GPAT2Q6NUI2 795 aa17.08■□□□□ 0.32
SCAMP4-209ENST00000585335 SYNE3Q6ZMZ3 975 aa17.08■□□□□ 0.32
SCAMP4-209ENST00000585335 IGDCC4Q8TDY8 1250 aa17.08■□□□□ 0.32
SCAMP4-209ENST00000585335 RPAP3Q9H6T3 665 aaPredicted RBP17.08■□□□□ 0.32
SCAMP4-209ENST00000585335 MTMR7Q9Y216 660 aa17.08■□□□□ 0.32
SCAMP4-209ENST00000585335 IGF2BP3O00425 579 aaKnown RBP eCLIP17.07■□□□□ 0.32
SCAMP4-209ENST00000585335 CA12O43570 354 aa17.07■□□□□ 0.32
SCAMP4-209ENST00000585335 HOXA7P31268 230 aaPredicted RBP17.07■□□□□ 0.32
SCAMP4-209ENST00000585335 DGKZQ13574 1117 aa17.07■□□□□ 0.32
SCAMP4-209ENST00000585335 TAF1CQ15572 869 aaPredicted RBP17.07■□□□□ 0.32
SCAMP4-209ENST00000585335 CCDC96Q2M329 555 aa17.07■□□□□ 0.32
SCAMP4-209ENST00000585335 TREML2Q5T2D2 321 aa17.07■□□□□ 0.32
SCAMP4-209ENST00000585335 FAM43AQ8N2R8 423 aa17.07■□□□□ 0.32
SCAMP4-209ENST00000585335 IL17RAQ96F46 866 aa17.07■□□□□ 0.32
SCAMP4-209ENST00000585335 PTPN18Q99952 460 aa17.07■□□□□ 0.32
SCAMP4-209ENST00000585335 LRRC2Q9BYS8 371 aa17.07■□□□□ 0.32
SCAMP4-209ENST00000585335 LY9Q9HBG7 655 aa17.07■□□□□ 0.32
SCAMP4-209ENST00000585335 ZFYVE28Q9HCC9 887 aa17.07■□□□□ 0.32
SCAMP4-209ENST00000585335 CALM1P0DP23 149 aa17.06■□□□□ 0.32
SCAMP4-209ENST00000585335 CALM2P0DP24 149 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms