RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 METAP2P50579 478 aaKnown RBP eCLIP17.28■□□□□ 0.36
CDK5RAP3-236ENST00000584991 IFIT1BQ5T764 474 aaKnown RBP17.28■□□□□ 0.36
CDK5RAP3-236ENST00000584991 SYNE3Q6ZMZ3 975 aa17.28■□□□□ 0.36
CDK5RAP3-236ENST00000584991 ZNF830Q96NB3 372 aaPredicted RBP17.28■□□□□ 0.36
CDK5RAP3-236ENST00000584991 VEZTQ9HBM0 779 aa17.28■□□□□ 0.36
CDK5RAP3-236ENST00000584991 RNF181Q9P0P0 153 aa17.28■□□□□ 0.36
CDK5RAP3-236ENST00000584991 MYO1BO43795 1136 aa17.27■□□□□ 0.36
CDK5RAP3-236ENST00000584991 NEMFO60524 1076 aa17.27■□□□□ 0.36
CDK5RAP3-236ENST00000584991 EGFRP00533 1210 aa17.27■□□□□ 0.36
CDK5RAP3-236ENST00000584991 SLURP2P0DP57 97 aa17.27■□□□□ 0.36
CDK5RAP3-236ENST00000584991 TPRNQ4KMQ1 711 aa17.27■□□□□ 0.36
CDK5RAP3-236ENST00000584991 CCDC73Q6ZRK6 1079 aa17.27■□□□□ 0.36
CDK5RAP3-236ENST00000584991 CCDC144CPQ8IYA2 1237 aa17.27■□□□□ 0.36
CDK5RAP3-236ENST00000584991 CKAP2LQ8IYA6 745 aa17.27■□□□□ 0.36
CDK5RAP3-236ENST00000584991 IL17RBQ9NRM6 502 aa17.27■□□□□ 0.36
CDK5RAP3-236ENST00000584991 ZNF75DP51815 510 aa17.27■□□□□ 0.35
CDK5RAP3-236ENST00000584991 FAM160A1Q05DH4 1040 aa17.27■□□□□ 0.35
CDK5RAP3-236ENST00000584991 STX1AQ16623 288 aa17.27■□□□□ 0.35
CDK5RAP3-236ENST00000584991 SAMD7Q7Z3H4 446 aa17.27■□□□□ 0.35
CDK5RAP3-236ENST00000584991 LUZP1Q86V48 1076 aa17.27■□□□□ 0.35
CDK5RAP3-236ENST00000584991 ZNF654Q8IZM8 581 aa17.27■□□□□ 0.35
CDK5RAP3-236ENST00000584991 DDX11Q96FC9 970 aa17.27■□□□□ 0.35
CDK5RAP3-236ENST00000584991 EHD4Q9H223 541 aa17.27■□□□□ 0.35
CDK5RAP3-236ENST00000584991 PI4KBQ9UBF8 816 aa17.27■□□□□ 0.35
CDK5RAP3-236ENST00000584991 SWAP70Q9UH65 585 aa17.27■□□□□ 0.35
CDK5RAP3-236ENST00000584991 A0A1W2PQ27 194 aa17.26■□□□□ 0.35
CDK5RAP3-236ENST00000584991 A0A1W2PQ64 194 aa17.26■□□□□ 0.35
CDK5RAP3-236ENST00000584991 A0A1W2PQD8 194 aa17.26■□□□□ 0.35
CDK5RAP3-236ENST00000584991 GOLGA8AA7E2F4 631 aa17.26■□□□□ 0.35
CDK5RAP3-236ENST00000584991 GPR162Q16538 588 aa17.26■□□□□ 0.35
CDK5RAP3-236ENST00000584991 GPC2Q8N158 579 aa17.26■□□□□ 0.35
CDK5RAP3-236ENST00000584991 CRACR2BQ8N4Y2 399 aaPredicted RBP17.26■□□□□ 0.35
CDK5RAP3-236ENST00000584991 MRFAP1L1Q96HT8 127 aa17.26■□□□□ 0.35
CDK5RAP3-236ENST00000584991 KCNF1Q9H3M0 494 aa17.26■□□□□ 0.35
CDK5RAP3-236ENST00000584991 TCP11L1Q9NUJ3 509 aa17.26■□□□□ 0.35
CDK5RAP3-236ENST00000584991 ATRNL1Q5VV63 1379 aa17.25■□□□□ 0.35
CDK5RAP3-236ENST00000584991 PPFIA3O75145 1194 aa17.25■□□□□ 0.35
CDK5RAP3-236ENST00000584991 PRKCSHP14314 528 aaPredicted RBP17.25■□□□□ 0.35
CDK5RAP3-236ENST00000584991 CDC27P30260 824 aa17.25■□□□□ 0.35
CDK5RAP3-236ENST00000584991 SHMT1P34896 483 aa17.25■□□□□ 0.35
CDK5RAP3-236ENST00000584991 TBC1D10BQ4KMP7 808 aaPredicted RBP17.25■□□□□ 0.35
CDK5RAP3-236ENST00000584991 RCSD1Q6JBY9 416 aa17.25■□□□□ 0.35
CDK5RAP3-236ENST00000584991 CCAR1Q8IX12 1150 aaKnown RBP17.25■□□□□ 0.35
CDK5RAP3-236ENST00000584991 NEDD1Q8NHV4 660 aa17.25■□□□□ 0.35
CDK5RAP3-236ENST00000584991 TRIM5Q9C035 493 aa17.25■□□□□ 0.35
CDK5RAP3-236ENST00000584991 RTEL1Q9NZ71 1219 aa17.25■□□□□ 0.35
CDK5RAP3-236ENST00000584991 COL2A1P02458 1487 aaPredicted RBP17.25■□□□□ 0.35
CDK5RAP3-236ENST00000584991 CNTNAP1P78357 1384 aa17.25■□□□□ 0.35
CDK5RAP3-236ENST00000584991 FAM196BA6NMK8 535 aa17.24■□□□□ 0.35
CDK5RAP3-236ENST00000584991 GOLGA6L19H0YKK7 550 aa17.24■□□□□ 0.35
CDK5RAP3-236ENST00000584991 CPLX1O14810 134 aa17.24■□□□□ 0.35
CDK5RAP3-236ENST00000584991 KINO60870 393 aaKnown RBP17.24■□□□□ 0.35
CDK5RAP3-236ENST00000584991 DHX8Q14562 1220 aaKnown RBP17.24■□□□□ 0.35
CDK5RAP3-236ENST00000584991 CCDC178Q5BJE1 867 aa17.24■□□□□ 0.35
CDK5RAP3-236ENST00000584991 FKBP1CQ5VVH2 108 aa17.24■□□□□ 0.35
CDK5RAP3-236ENST00000584991 C9orf131Q5VYM1 1079 aa17.24■□□□□ 0.35
CDK5RAP3-236ENST00000584991 ADALQ6DHV7 355 aa17.24■□□□□ 0.35
CDK5RAP3-236ENST00000584991 BRAPQ7Z569 592 aa17.24■□□□□ 0.35
CDK5RAP3-236ENST00000584991 FOXP4Q8IVH2 680 aaPredicted RBP17.24■□□□□ 0.35
CDK5RAP3-236ENST00000584991 ENGASEQ8NFI3 743 aa17.24■□□□□ 0.35
CDK5RAP3-236ENST00000584991 NUP133Q8WUM0 1156 aa17.24■□□□□ 0.35
CDK5RAP3-236ENST00000584991 FAM151AQ8WW52 585 aa17.24■□□□□ 0.35
CDK5RAP3-236ENST00000584991 NAT10Q9H0A0 1025 aaKnown RBP17.24■□□□□ 0.35
CDK5RAP3-236ENST00000584991 DNAJC18Q9H819 358 aa17.24■□□□□ 0.35
CDK5RAP3-236ENST00000584991 ANO10Q9NW15 660 aa17.24■□□□□ 0.35
CDK5RAP3-236ENST00000584991 FAM13BQ9NYF5 915 aa17.24■□□□□ 0.35
CDK5RAP3-236ENST00000584991 H7C1D1 291 aa17.24■□□□□ 0.35
CDK5RAP3-236ENST00000584991 AKR1B1P15121 316 aa17.24■□□□□ 0.35
CDK5RAP3-236ENST00000584991 IQCB1Q15051 598 aa17.24■□□□□ 0.35
CDK5RAP3-236ENST00000584991 CATIPQ7Z7H3 387 aa17.24■□□□□ 0.35
CDK5RAP3-236ENST00000584991 DGKHQ86XP1 1220 aa17.24■□□□□ 0.35
CDK5RAP3-236ENST00000584991 CSRNP1Q96S65 589 aa17.24■□□□□ 0.35
CDK5RAP3-236ENST00000584991 TRIM34Q9BYJ4 488 aa17.24■□□□□ 0.35
CDK5RAP3-236ENST00000584991 FAM217BQ9NTX9 383 aaPredicted RBP17.24■□□□□ 0.35
CDK5RAP3-236ENST00000584991 SNW1Q13573 536 aaKnown RBP17.23■□□□□ 0.35
CDK5RAP3-236ENST00000584991 KIF4BQ2VIQ3 1234 aa17.23■□□□□ 0.35
CDK5RAP3-236ENST00000584991 GPRC5DQ9NZD1 345 aa17.23■□□□□ 0.35
CDK5RAP3-236ENST00000584991 NID2Q14112 1375 aa17.23■□□□□ 0.35
CDK5RAP3-236ENST00000584991 DDNO94850 711 aaPredicted RBP17.22■□□□□ 0.35
CDK5RAP3-236ENST00000584991 YEATS4O95619 227 aa17.22■□□□□ 0.35
CDK5RAP3-236ENST00000584991 RCAN1P53805 252 aa17.22■□□□□ 0.35
CDK5RAP3-236ENST00000584991 RTN1Q16799 776 aa17.22■□□□□ 0.35
CDK5RAP3-236ENST00000584991 FAM83AQ86UY5 434 aa17.22■□□□□ 0.35
CDK5RAP3-236ENST00000584991 FANCBQ8NB91 859 aa17.22■□□□□ 0.35
CDK5RAP3-236ENST00000584991 KCNG4Q8TDN1 519 aa17.22■□□□□ 0.35
CDK5RAP3-236ENST00000584991 ANKS1AQ92625 1134 aa17.22■□□□□ 0.35
CDK5RAP3-236ENST00000584991 USP28Q96RU2 1077 aa17.22■□□□□ 0.35
CDK5RAP3-236ENST00000584991 TMEM39BQ9GZU3 492 aa17.22■□□□□ 0.35
CDK5RAP3-236ENST00000584991 KAT14Q9H8E8 782 aa17.22■□□□□ 0.35
CDK5RAP3-236ENST00000584991 POLR3EQ9NVU0 708 aa17.22■□□□□ 0.35
CDK5RAP3-236ENST00000584991 STX8Q9UNK0 236 aa17.22■□□□□ 0.35
CDK5RAP3-236ENST00000584991 SCAF8Q9UPN6 1271 aaKnown RBP17.22■□□□□ 0.35
CDK5RAP3-236ENST00000584991 DRC7Q8IY82 874 aa17.22■□□□□ 0.35
CDK5RAP3-236ENST00000584991 SPC24Q8NBT2 197 aa17.22■□□□□ 0.35
CDK5RAP3-236ENST00000584991 CEP95Q96GE4 821 aa17.22■□□□□ 0.35
CDK5RAP3-236ENST00000584991 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.22■□□□□ 0.35
CDK5RAP3-236ENST00000584991 DNAJC25Q9H1X3 360 aa17.22■□□□□ 0.35
CDK5RAP3-236ENST00000584991 ASTN2O75129 1339 aaPredicted RBP17.22■□□□□ 0.35
CDK5RAP3-236ENST00000584991 PLIN4Q96Q06 1357 aa17.21■□□□□ 0.35
CDK5RAP3-236ENST00000584991 SOCS7O14512 581 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms