RNA–Protein interactions for RNA: ENST00000584842.1

CTC1-213, Transcript of CST telomere replication complex component 1, humanhuman

TSL 3

Gene CTC1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-213ENST00000584842 ARHGAP39Q9C0H5 1083 aa9.48□□□□□ -0.89
CTC1-213ENST00000584842 RPAP3Q9H6T3 665 aaPredicted RBP9.48□□□□□ -0.89
CTC1-213ENST00000584842 TOMM22Q9NS69 142 aa9.48□□□□□ -0.89
CTC1-213ENST00000584842 TMX2Q9Y320 296 aa9.48□□□□□ -0.89
CTC1-213ENST00000584842 PLIN4Q96Q06 1357 aa9.48□□□□□ -0.89
CTC1-213ENST00000584842 DOCK3Q8IZD9 2030 aa9.48□□□□□ -0.89
CTC1-213ENST00000584842 A0A0G2JMZ2 1700 aa9.48□□□□□ -0.89
CTC1-213ENST00000584842 TSPY2A6NKD2 308 aa9.47□□□□□ -0.89
CTC1-213ENST00000584842 WDR46O15213 610 aaKnown RBP9.47□□□□□ -0.89
CTC1-213ENST00000584842 PRDM1O75626 825 aa9.47□□□□□ -0.89
CTC1-213ENST00000584842 HSPD1P10809 573 aaKnown RBP9.47□□□□□ -0.89
CTC1-213ENST00000584842 PCP11498 1178 aaKnown RBP9.47□□□□□ -0.89
CTC1-213ENST00000584842 EEF2P13639 858 aaKnown RBP9.47□□□□□ -0.89
CTC1-213ENST00000584842 VPS53Q5VIR6 699 aa9.47□□□□□ -0.89
CTC1-213ENST00000584842 CATSPERGQ6ZRH7 1159 aa9.47□□□□□ -0.89
CTC1-213ENST00000584842 ZNF589Q86UQ0 364 aaPredicted RBP9.47□□□□□ -0.89
CTC1-213ENST00000584842 CLEC10AQ8IUN9 316 aa9.47□□□□□ -0.89
CTC1-213ENST00000584842 TRIM47Q96LD4 638 aa9.47□□□□□ -0.89
CTC1-213ENST00000584842 PAGR1Q9BTK6 254 aa9.47□□□□□ -0.89
CTC1-213ENST00000584842 RNF41Q9H4P4 317 aaPredicted RBP9.47□□□□□ -0.89
CTC1-213ENST00000584842 VCPKMTQ9H867 229 aa9.47□□□□□ -0.89
CTC1-213ENST00000584842 MORF4L1Q9UBU8 362 aa9.47□□□□□ -0.89
CTC1-213ENST00000584842 SRRDQ9UH36 339 aa9.47□□□□□ -0.89
CTC1-213ENST00000584842 CTNNA3Q9UI47 895 aa9.47□□□□□ -0.89
CTC1-213ENST00000584842 ANAPC4Q9UJX5 808 aa9.47□□□□□ -0.89
CTC1-213ENST00000584842 SYNPO2Q9UMS6 1093 aa9.47□□□□□ -0.89
CTC1-213ENST00000584842 PTCH2Q9Y6C5 1203 aa9.47□□□□□ -0.89
CTC1-213ENST00000584842 PLXNB2O15031 1838 aa9.47□□□□□ -0.89
CTC1-213ENST00000584842 COL11A1P12107 1806 aaPredicted RBP9.47□□□□□ -0.89
CTC1-213ENST00000584842 A0A1W2PRG0 241 aa9.46□□□□□ -0.9
CTC1-213ENST00000584842 SMIM22K7EJ46 135 aa9.46□□□□□ -0.9
CTC1-213ENST00000584842 RANBP6O60518 1105 aaKnown RBP9.46□□□□□ -0.9
CTC1-213ENST00000584842 FLOT1O75955 427 aa9.46□□□□□ -0.9
CTC1-213ENST00000584842 TTLL1O95922 423 aa9.46□□□□□ -0.9
CTC1-213ENST00000584842 GSPT1P15170 499 aaKnown RBP9.46□□□□□ -0.9
CTC1-213ENST00000584842 MAPK4P31152 587 aa9.46□□□□□ -0.9
CTC1-213ENST00000584842 NT5C2P49902 561 aa9.46□□□□□ -0.9
CTC1-213ENST00000584842 ERVK-9P63128 1117 aa9.46□□□□□ -0.9
CTC1-213ENST00000584842 ERVK-24P63145 666 aa9.46□□□□□ -0.9
CTC1-213ENST00000584842 TFAP4Q01664 338 aa9.46□□□□□ -0.9
CTC1-213ENST00000584842 CTDSPL2Q05D32 466 aa9.46□□□□□ -0.9
CTC1-213ENST00000584842 SPICE1Q8N0Z3 855 aa9.46□□□□□ -0.9
CTC1-213ENST00000584842 MB21D1Q8N884 522 aa9.46□□□□□ -0.9
CTC1-213ENST00000584842 NEDD1Q8NHV4 660 aa9.46□□□□□ -0.9
CTC1-213ENST00000584842 P2RX7Q99572 595 aaKnown RBP9.46□□□□□ -0.9
CTC1-213ENST00000584842 HOXC10Q9NYD6 342 aa9.46□□□□□ -0.9
CTC1-213ENST00000584842 NYAP2Q9P242 653 aa9.46□□□□□ -0.9
CTC1-213ENST00000584842 RABGAP1Q9Y3P9 1069 aa9.46□□□□□ -0.9
CTC1-213ENST00000584842 RLFQ13129 1914 aa9.46□□□□□ -0.9
CTC1-213ENST00000584842 ZNF213O14771 459 aa9.45□□□□□ -0.9
CTC1-213ENST00000584842 FOXP2O15409 715 aa9.45□□□□□ -0.9
CTC1-213ENST00000584842 ORC4O43929 436 aa9.45□□□□□ -0.9
CTC1-213ENST00000584842 FGAP02671 866 aa9.45□□□□□ -0.9
CTC1-213ENST00000584842 PRKCZQ05513 592 aa9.45□□□□□ -0.9
CTC1-213ENST00000584842 COG2Q14746 738 aa9.45□□□□□ -0.9
CTC1-213ENST00000584842 IMMTQ16891 758 aaKnown RBP9.45□□□□□ -0.9
CTC1-213ENST00000584842 FAM47AQ5JRC9 791 aa9.45□□□□□ -0.9
CTC1-213ENST00000584842 RRP12Q5JTH9 1297 aaKnown RBP9.45□□□□□ -0.9
CTC1-213ENST00000584842 WDR78Q5VTH9 848 aa9.45□□□□□ -0.9
CTC1-213ENST00000584842 SAMD1Q6SPF0 538 aaPredicted RBP9.45□□□□□ -0.9
CTC1-213ENST00000584842 LBX2Q6XYB7 198 aa9.45□□□□□ -0.9
CTC1-213ENST00000584842 MFSD6Q6ZSS7 791 aa9.45□□□□□ -0.9
CTC1-213ENST00000584842 SLAIN1Q8ND83 568 aa9.45□□□□□ -0.9
CTC1-213ENST00000584842 SOCS4Q8WXH5 440 aa9.45□□□□□ -0.9
CTC1-213ENST00000584842 ARMC5Q96C12 935 aa9.45□□□□□ -0.9
CTC1-213ENST00000584842 CEP95Q96GE4 821 aa9.45□□□□□ -0.9
CTC1-213ENST00000584842 DSCC1Q9BVC3 393 aa9.45□□□□□ -0.9
CTC1-213ENST00000584842 TMEM106CQ9BVX2 250 aa9.45□□□□□ -0.9
CTC1-213ENST00000584842 BIN2Q9UBW5 565 aaPredicted RBP9.45□□□□□ -0.9
CTC1-213ENST00000584842 CLIP2Q9UDT6 1046 aa9.45□□□□□ -0.9
CTC1-213ENST00000584842 ISY1Q9ULR0 285 aaKnown RBP9.45□□□□□ -0.9
CTC1-213ENST00000584842 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.45□□□□□ -0.9
CTC1-213ENST00000584842 CTDP1Q9Y5B0 961 aaPredicted RBP9.45□□□□□ -0.9
CTC1-213ENST00000584842 SPDYE16A6NNV3 312 aaPredicted RBP9.44□□□□□ -0.9
CTC1-213ENST00000584842 CTGFP29279 349 aa9.44□□□□□ -0.9
CTC1-213ENST00000584842 GRK4P32298 578 aa9.44□□□□□ -0.9
CTC1-213ENST00000584842 HAND2P61296 217 aa9.44□□□□□ -0.9
CTC1-213ENST00000584842 UBXN2AP68543 259 aa9.44□□□□□ -0.9
CTC1-213ENST00000584842 AKNAD1Q5T1N1 836 aa9.44□□□□□ -0.9
CTC1-213ENST00000584842 CASC1Q6TDU7 716 aa9.44□□□□□ -0.9
CTC1-213ENST00000584842 PPP4R3CPQ6ZMV5 832 aa9.44□□□□□ -0.9
CTC1-213ENST00000584842 STAG1Q8WVM7 1258 aa9.44□□□□□ -0.9
CTC1-213ENST00000584842 ESR2Q92731 530 aa9.44□□□□□ -0.9
CTC1-213ENST00000584842 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.44□□□□□ -0.9
CTC1-213ENST00000584842 MTMR4Q9NYA4 1195 aa9.44□□□□□ -0.9
CTC1-213ENST00000584842 STX8Q9UNK0 236 aa9.44□□□□□ -0.9
CTC1-213ENST00000584842 IVNS1ABPQ9Y6Y0 642 aa9.44□□□□□ -0.9
CTC1-213ENST00000584842 ZNF236Q9UL36 1845 aa9.44□□□□□ -0.9
CTC1-213ENST00000584842 KIAA0100Q14667 2235 aaKnown RBP9.44□□□□□ -0.9
CTC1-213ENST00000584842 IGKV6D-41A0A0C4DH26 115 aa9.43□□□□□ -0.9
CTC1-213ENST00000584842 F5H6K3 240 aa9.43□□□□□ -0.9
CTC1-213ENST00000584842 ADCY3O60266 1144 aa9.43□□□□□ -0.9
CTC1-213ENST00000584842 NDUFB10O96000 172 aa9.43□□□□□ -0.9
CTC1-213ENST00000584842 CHMLP26374 656 aa9.43□□□□□ -0.9
CTC1-213ENST00000584842 COPB2P35606 906 aa9.43□□□□□ -0.9
CTC1-213ENST00000584842 FLT3LGP49771 235 aa9.43□□□□□ -0.9
CTC1-213ENST00000584842 SOX10P56693 466 aa9.43□□□□□ -0.9
CTC1-213ENST00000584842 CAP1Q01518 475 aa9.43□□□□□ -0.9
CTC1-213ENST00000584842 KLRC3Q07444 240 aa9.43□□□□□ -0.9
CTC1-213ENST00000584842 IRF5Q13568 498 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms