RNA–Protein interactions for RNA: ENST00000584669.5

TOP3A-218, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-218ENST00000584669 MORF4L1Q9UBU8 362 aa24.76■■□□□ 1.55
TOP3A-218ENST00000584669 RLFQ13129 1914 aa24.76■■□□□ 1.55
TOP3A-218ENST00000584669 BRCA2P51587 3418 aa24.75■■□□□ 1.55
TOP3A-218ENST00000584669 H0YGN5 161 aa24.75■■□□□ 1.55
TOP3A-218ENST00000584669 RASA1P20936 1047 aa24.75■■□□□ 1.55
TOP3A-218ENST00000584669 MCMDC2Q4G0Z9 681 aa24.75■■□□□ 1.55
TOP3A-218ENST00000584669 ZNF589Q86UQ0 364 aaPredicted RBP24.75■■□□□ 1.55
TOP3A-218ENST00000584669 TICAM2Q86XR7 235 aa24.75■■□□□ 1.55
TOP3A-218ENST00000584669 SIAH1Q8IUQ4 282 aa24.75■■□□□ 1.55
TOP3A-218ENST00000584669 GPRC5AQ8NFJ5 357 aa24.75■■□□□ 1.55
TOP3A-218ENST00000584669 TXNRD2Q9NNW7 524 aa24.75■■□□□ 1.55
TOP3A-218ENST00000584669 SGPL1O95470 568 aa24.74■■□□□ 1.55
TOP3A-218ENST00000584669 TFRCP02786 760 aaKnown RBP24.74■■□□□ 1.55
TOP3A-218ENST00000584669 USP14P54578 494 aa24.74■■□□□ 1.55
TOP3A-218ENST00000584669 CCAR1Q8IX12 1150 aaKnown RBP24.74■■□□□ 1.55
TOP3A-218ENST00000584669 MKNK2Q9HBH9 465 aa24.74■■□□□ 1.55
TOP3A-218ENST00000584669 VCAM1P19320 739 aa24.73■■□□□ 1.55
TOP3A-218ENST00000584669 ICA1Q05084 483 aa24.73■■□□□ 1.55
TOP3A-218ENST00000584669 TTC22Q5TAA0 569 aa24.73■■□□□ 1.55
TOP3A-218ENST00000584669 HTATIP2Q9BUP3 242 aa24.73■■□□□ 1.55
TOP3A-218ENST00000584669 LAMA4Q16363 1823 aa24.72■■□□□ 1.55
TOP3A-218ENST00000584669 PRDM1O75626 825 aa24.72■■□□□ 1.55
TOP3A-218ENST00000584669 HMGCRP04035 888 aa24.72■■□□□ 1.55
TOP3A-218ENST00000584669 GSPT1P15170 499 aaKnown RBP24.72■■□□□ 1.55
TOP3A-218ENST00000584669 PPARAQ07869 468 aa24.72■■□□□ 1.55
TOP3A-218ENST00000584669 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.72■■□□□ 1.55
TOP3A-218ENST00000584669 GJD2Q9UKL4 321 aa24.72■■□□□ 1.55
TOP3A-218ENST00000584669 PLXNB2O15031 1838 aa24.72■■□□□ 1.55
TOP3A-218ENST00000584669 CCDC171Q6TFL3 1326 aa24.71■■□□□ 1.55
TOP3A-218ENST00000584669 COL11A1P12107 1806 aaPredicted RBP24.71■■□□□ 1.55
TOP3A-218ENST00000584669 CYP2B6P20813 491 aa24.71■■□□□ 1.55
TOP3A-218ENST00000584669 KIAA1755Q5JYT7 1200 aa24.71■■□□□ 1.55
TOP3A-218ENST00000584669 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.71■■□□□ 1.55
TOP3A-218ENST00000584669 ARHGEF10LQ9HCE6 1279 aa24.71■■□□□ 1.55
TOP3A-218ENST00000584669 CWC22Q9HCG8 908 aaKnown RBP24.71■■□□□ 1.55
TOP3A-218ENST00000584669 RBPJLQ9UBG7 517 aa24.71■■□□□ 1.55
TOP3A-218ENST00000584669 USP17L15C9J2P7 530 aa24.7■■□□□ 1.54
TOP3A-218ENST00000584669 USP17L13C9JLJ4 530 aa24.7■■□□□ 1.54
TOP3A-218ENST00000584669 USP17L11C9JVI0 530 aa24.7■■□□□ 1.54
TOP3A-218ENST00000584669 USP17L18D6R9N7 530 aa24.7■■□□□ 1.54
TOP3A-218ENST00000584669 USP17L22D6RA61 530 aa24.7■■□□□ 1.54
TOP3A-218ENST00000584669 USP17L17D6RBQ6 530 aa24.7■■□□□ 1.54
TOP3A-218ENST00000584669 USP17L19D6RCP7 530 aa24.7■■□□□ 1.54
TOP3A-218ENST00000584669 USP17L20D6RJB6 530 aa24.7■■□□□ 1.54
TOP3A-218ENST00000584669 EEF2P13639 858 aaKnown RBP24.7■■□□□ 1.54
TOP3A-218ENST00000584669 ERVK-9P63128 1117 aa24.7■■□□□ 1.54
TOP3A-218ENST00000584669 ERVK-24P63145 666 aa24.7■■□□□ 1.54
TOP3A-218ENST00000584669 CTDSPL2Q05D32 466 aa24.7■■□□□ 1.54
TOP3A-218ENST00000584669 USP17L24Q0WX57 530 aa24.7■■□□□ 1.54
TOP3A-218ENST00000584669 UBE2Q1Q7Z7E8 422 aa24.7■■□□□ 1.54
TOP3A-218ENST00000584669 GTF3C2Q8WUA4 911 aaPredicted RBP24.7■■□□□ 1.54
TOP3A-218ENST00000584669 RPAP3Q9H6T3 665 aaPredicted RBP24.7■■□□□ 1.54
TOP3A-218ENST00000584669 PAK6Q9NQU5 681 aaPredicted RBP24.7■■□□□ 1.54
TOP3A-218ENST00000584669 COLQQ9Y215 455 aaPredicted RBP24.7■■□□□ 1.54
TOP3A-218ENST00000584669 HSPD1P10809 573 aaKnown RBP24.69■■□□□ 1.54
TOP3A-218ENST00000584669 MAPK4P31152 587 aa24.69■■□□□ 1.54
TOP3A-218ENST00000584669 ATP2B2Q01814 1243 aa24.69■■□□□ 1.54
TOP3A-218ENST00000584669 TRIM32Q13049 653 aa24.69■■□□□ 1.54
TOP3A-218ENST00000584669 ALX1Q15699 326 aa24.69■■□□□ 1.54
TOP3A-218ENST00000584669 POTEEQ6S8J3 1075 aa24.69■■□□□ 1.54
TOP3A-218ENST00000584669 CWC27Q6UX04 472 aaKnown RBP24.69■■□□□ 1.54
TOP3A-218ENST00000584669 CATSPERGQ6ZRH7 1159 aa24.69■■□□□ 1.54
TOP3A-218ENST00000584669 NUDT12Q9BQG2 462 aa24.69■■□□□ 1.54
TOP3A-218ENST00000584669 KANSL2Q9H9L4 492 aa24.69■■□□□ 1.54
TOP3A-218ENST00000584669 DIAPH3Q9NSV4 1193 aa24.69■■□□□ 1.54
TOP3A-218ENST00000584669 TMX2Q9Y320 296 aa24.69■■□□□ 1.54
TOP3A-218ENST00000584669 TRIOBPQ9H2D6 2365 aa24.68■■□□□ 1.54
TOP3A-218ENST00000584669 Q3C1V9 767 aa24.68■■□□□ 1.54
TOP3A-218ENST00000584669 ZNF444Q8N0Y2 327 aaPredicted RBP24.68■■□□□ 1.54
TOP3A-218ENST00000584669 SOCS4Q8WXH5 440 aa24.68■■□□□ 1.54
TOP3A-218ENST00000584669 PORCNQ9H237 461 aa24.68■■□□□ 1.54
TOP3A-218ENST00000584669 INCENPQ9NQS7 918 aa24.68■■□□□ 1.54
TOP3A-218ENST00000584669 A0A0G2JMZ2 1700 aa24.68■■□□□ 1.54
TOP3A-218ENST00000584669 FGAP02671 866 aa24.67■■□□□ 1.54
TOP3A-218ENST00000584669 SLC3A2P08195 630 aaKnown RBP24.67■■□□□ 1.54
TOP3A-218ENST00000584669 PDE4BQ07343 736 aa24.67■■□□□ 1.54
TOP3A-218ENST00000584669 WDR78Q5VTH9 848 aa24.67■■□□□ 1.54
TOP3A-218ENST00000584669 SPICE1Q8N0Z3 855 aa24.67■■□□□ 1.54
TOP3A-218ENST00000584669 TRIB2Q92519 343 aa24.67■■□□□ 1.54
TOP3A-218ENST00000584669 ZNF287Q9HBT7 754 aa24.67■■□□□ 1.54
TOP3A-218ENST00000584669 TACC3Q9Y6A5 838 aa24.67■■□□□ 1.54
TOP3A-218ENST00000584669 HIP1O00291 1037 aa24.66■■□□□ 1.54
TOP3A-218ENST00000584669 SH2D4AQ9H788 454 aa24.66■■□□□ 1.54
TOP3A-218ENST00000584669 VCPKMTQ9H867 229 aa24.66■■□□□ 1.54
TOP3A-218ENST00000584669 HMX1Q9NP08 348 aaPredicted RBP24.66■■□□□ 1.54
TOP3A-218ENST00000584669 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.66■■□□□ 1.54
TOP3A-218ENST00000584669 IGKV6D-41A0A0C4DH26 115 aa24.65■■□□□ 1.54
TOP3A-218ENST00000584669 ZKSCAN1P17029 563 aaPredicted RBP24.65■■□□□ 1.54
TOP3A-218ENST00000584669 FAM47AQ5JRC9 791 aa24.65■■□□□ 1.54
TOP3A-218ENST00000584669 CHRDL2Q6WN34 429 aa24.65■■□□□ 1.54
TOP3A-218ENST00000584669 GPR142Q7Z601 462 aa24.65■■□□□ 1.54
TOP3A-218ENST00000584669 PLEKHH3Q7Z736 793 aa24.65■■□□□ 1.54
TOP3A-218ENST00000584669 TANGO6Q9C0B7 1094 aa24.65■■□□□ 1.54
TOP3A-218ENST00000584669 CRISPLD2Q9H0B8 497 aa24.65■■□□□ 1.54
TOP3A-218ENST00000584669 ANAPC4Q9UJX5 808 aa24.65■■□□□ 1.54
TOP3A-218ENST00000584669 RABGAP1Q9Y3P9 1069 aa24.65■■□□□ 1.54
TOP3A-218ENST00000584669 NR2E3Q9Y5X4 410 aa24.65■■□□□ 1.54
TOP3A-218ENST00000584669 RPTORQ8N122 1335 aa24.64■■□□□ 1.54
TOP3A-218ENST00000584669 PRKAR2AP13861 404 aaKnown RBP24.64■■□□□ 1.54
TOP3A-218ENST00000584669 MFAP1P55081 439 aaKnown RBP24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms