RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 NTRK3Q16288 839 aa11.76□□□□□ -0.53
RFFL-212ENST00000584655 DYMQ7RTS9 669 aa11.76□□□□□ -0.53
RFFL-212ENST00000584655 SAMD7Q7Z3H4 446 aa11.76□□□□□ -0.53
RFFL-212ENST00000584655 OGFOD1Q8N543 542 aa11.76□□□□□ -0.53
RFFL-212ENST00000584655 LLPHQ9BRT6 129 aaKnown RBP11.76□□□□□ -0.53
RFFL-212ENST00000584655 PCDHA5Q9Y5H7 936 aa11.76□□□□□ -0.53
RFFL-212ENST00000584655 VIRMAQ69YN4 1812 aaKnown RBP11.76□□□□□ -0.53
RFFL-212ENST00000584655 DDX39AO00148 427 aaKnown RBP11.76□□□□□ -0.53
RFFL-212ENST00000584655 PDE6BP35913 854 aa11.76□□□□□ -0.53
RFFL-212ENST00000584655 CRKP46108 304 aa11.76□□□□□ -0.53
RFFL-212ENST00000584655 DDX19AQ9NUU7 478 aaKnown RBP11.76□□□□□ -0.53
RFFL-212ENST00000584655 PYCARDQ9ULZ3 195 aa11.76□□□□□ -0.53
RFFL-212ENST00000584655 GH2P01242 217 aa11.75□□□□□ -0.53
RFFL-212ENST00000584655 PARP1P09874 1014 aaKnown RBP11.75□□□□□ -0.53
RFFL-212ENST00000584655 CCT6AP40227 531 aaKnown RBP11.75□□□□□ -0.53
RFFL-212ENST00000584655 TECP42680 631 aa11.75□□□□□ -0.53
RFFL-212ENST00000584655 C12orf60Q5U649 245 aa11.75□□□□□ -0.53
RFFL-212ENST00000584655 CDC42EP5Q6NZY7 148 aa11.75□□□□□ -0.53
RFFL-212ENST00000584655 CEP57L1Q8IYX8 460 aa11.75□□□□□ -0.53
RFFL-212ENST00000584655 FAM200AQ8TCP9 573 aa11.75□□□□□ -0.53
RFFL-212ENST00000584655 AKT1S1Q96B36 256 aa11.75□□□□□ -0.53
RFFL-212ENST00000584655 BRIP1Q9BX63 1249 aa11.75□□□□□ -0.53
RFFL-212ENST00000584655 TMEM39BQ9GZU3 492 aa11.75□□□□□ -0.53
RFFL-212ENST00000584655 PEX10O60683 326 aa11.75□□□□□ -0.53
RFFL-212ENST00000584655 CCAR2Q8N163 923 aaKnown RBP11.75□□□□□ -0.53
RFFL-212ENST00000584655 KIFC2Q96AC6 838 aa11.75□□□□□ -0.53
RFFL-212ENST00000584655 PCMTD1Q96MG8 357 aaPredicted RBP11.75□□□□□ -0.53
RFFL-212ENST00000584655 TOB1P50616 345 aaPredicted RBP11.75□□□□□ -0.53
RFFL-212ENST00000584655 GSTO1P78417 241 aa11.75□□□□□ -0.53
RFFL-212ENST00000584655 TROAPQ12815 778 aa11.75□□□□□ -0.53
RFFL-212ENST00000584655 SHISA4Q96DD7 197 aa11.75□□□□□ -0.53
RFFL-212ENST00000584655 MASTLQ96GX5 879 aa11.75□□□□□ -0.53
RFFL-212ENST00000584655 ZMYND15Q9H091 742 aa11.75□□□□□ -0.53
RFFL-212ENST00000584655 SMCO2A6NFE2 343 aa11.74□□□□□ -0.53
RFFL-212ENST00000584655 DCAF8L1A6NGE4 600 aa11.74□□□□□ -0.53
RFFL-212ENST00000584655 EGFRP00533 1210 aa11.74□□□□□ -0.53
RFFL-212ENST00000584655 MMP1P03956 469 aa11.74□□□□□ -0.53
RFFL-212ENST00000584655 RASA1P20936 1047 aa11.74□□□□□ -0.53
RFFL-212ENST00000584655 SLC1A4P43007 532 aa11.74□□□□□ -0.53
RFFL-212ENST00000584655 GRM1Q13255 1194 aa11.74□□□□□ -0.53
RFFL-212ENST00000584655 TTC38Q5R3I4 469 aa11.74□□□□□ -0.53
RFFL-212ENST00000584655 ZSCAN30Q86W11 494 aa11.74□□□□□ -0.53
RFFL-212ENST00000584655 SYMPKQ92797 1274 aaKnown RBP11.74□□□□□ -0.53
RFFL-212ENST00000584655 ASTN2O75129 1339 aaPredicted RBP11.74□□□□□ -0.53
RFFL-212ENST00000584655 USP17L10C9JJH3 530 aa11.74□□□□□ -0.53
RFFL-212ENST00000584655 FMNL1O95466 1100 aaPredicted RBP11.74□□□□□ -0.53
RFFL-212ENST00000584655 NPR1P16066 1061 aa11.74□□□□□ -0.53
RFFL-212ENST00000584655 IFNAR1P17181 557 aa11.74□□□□□ -0.53
RFFL-212ENST00000584655 MKRN3Q13064 507 aaKnown RBP11.74□□□□□ -0.53
RFFL-212ENST00000584655 PLS1Q14651 629 aa11.74□□□□□ -0.53
RFFL-212ENST00000584655 KRI1Q8N9T8 703 aaKnown RBP11.74□□□□□ -0.53
RFFL-212ENST00000584655 KCNG4Q8TDN1 519 aa11.74□□□□□ -0.53
RFFL-212ENST00000584655 RTFDC1Q9BY42 306 aaPredicted RBP11.74□□□□□ -0.53
RFFL-212ENST00000584655 ATP8A2Q9NTI2 1148 aa11.74□□□□□ -0.53
RFFL-212ENST00000584655 SERPINB13Q9UIV8 391 aa11.74□□□□□ -0.53
RFFL-212ENST00000584655 ATP6V0A2Q9Y487 856 aa11.74□□□□□ -0.53
RFFL-212ENST00000584655 ITGB4P16144 1822 aa11.74□□□□□ -0.53
RFFL-212ENST00000584655 SOCS7O14512 581 aa11.74□□□□□ -0.53
RFFL-212ENST00000584655 SCG2P13521 617 aa11.74□□□□□ -0.53
RFFL-212ENST00000584655 ALDH1B1P30837 517 aa11.74□□□□□ -0.53
RFFL-212ENST00000584655 CCDC178Q5BJE1 867 aa11.74□□□□□ -0.53
RFFL-212ENST00000584655 WDR78Q5VTH9 848 aa11.74□□□□□ -0.53
RFFL-212ENST00000584655 ZNF408Q9H9D4 720 aa11.74□□□□□ -0.53
RFFL-212ENST00000584655 ARPP21Q9UBL0 812 aaPredicted RBP11.74□□□□□ -0.53
RFFL-212ENST00000584655 RGS17Q9UGC6 210 aaPredicted RBP11.74□□□□□ -0.53
RFFL-212ENST00000584655 RCOR1Q9UKL0 485 aa11.74□□□□□ -0.53
RFFL-212ENST00000584655 FAM205AQ6ZU69 1335 aa11.74□□□□□ -0.53
RFFL-212ENST00000584655 HLA-DOAP06340 250 aa11.73□□□□□ -0.53
RFFL-212ENST00000584655 ECE1P42892 770 aa11.73□□□□□ -0.53
RFFL-212ENST00000584655 RASSF7Q02833 373 aa11.73□□□□□ -0.53
RFFL-212ENST00000584655 KANSL2Q9H9L4 492 aa11.73□□□□□ -0.53
RFFL-212ENST00000584655 MYO5AQ9Y4I1 1855 aaKnown RBP11.73□□□□□ -0.53
RFFL-212ENST00000584655 PDE4DIPQ5VU43 2346 aa11.73□□□□□ -0.53
RFFL-212ENST00000584655 LAMA3Q16787 3333 aa11.73□□□□□ -0.53
RFFL-212ENST00000584655 PARP4Q9UKK3 1724 aaKnown RBP11.73□□□□□ -0.53
RFFL-212ENST00000584655 CALM1P0DP23 149 aa11.73□□□□□ -0.53
RFFL-212ENST00000584655 CALM2P0DP24 149 aa11.73□□□□□ -0.53
RFFL-212ENST00000584655 CALM3P0DP25 149 aa11.73□□□□□ -0.53
RFFL-212ENST00000584655 JMYQ8N9B5 988 aa11.73□□□□□ -0.53
RFFL-212ENST00000584655 COL16A1Q07092 1604 aaPredicted RBP11.73□□□□□ -0.53
RFFL-212ENST00000584655 KIF5BP33176 963 aa11.73□□□□□ -0.53
RFFL-212ENST00000584655 NBPF9Q3BBW0 867 aa11.73□□□□□ -0.53
RFFL-212ENST00000584655 ZNF526Q8TF50 670 aaPredicted RBP11.73□□□□□ -0.53
RFFL-212ENST00000584655 PRDM10Q9NQV6 1147 aa11.73□□□□□ -0.53
RFFL-212ENST00000584655 CYTH3O43739 400 aa11.72□□□□□ -0.53
RFFL-212ENST00000584655 CFBP00751 764 aa11.72□□□□□ -0.53
RFFL-212ENST00000584655 UBA7P41226 1012 aa11.72□□□□□ -0.53
RFFL-212ENST00000584655 CYP4A11Q02928 519 aa11.72□□□□□ -0.53
RFFL-212ENST00000584655 SLC27A3Q5K4L6 730 aa11.72□□□□□ -0.53
RFFL-212ENST00000584655 FANCLQ9NW38 375 aa11.72□□□□□ -0.53
RFFL-212ENST00000584655 LIFRP42702 1097 aa11.72□□□□□ -0.53
RFFL-212ENST00000584655 SEC23AQ15436 765 aa11.72□□□□□ -0.53
RFFL-212ENST00000584655 CERKLQ49MI3 558 aaPredicted RBP11.72□□□□□ -0.53
RFFL-212ENST00000584655 WWC2Q6AWC2 1192 aa11.72□□□□□ -0.53
RFFL-212ENST00000584655 RCSD1Q6JBY9 416 aa11.72□□□□□ -0.53
RFFL-212ENST00000584655 WASF1Q92558 559 aa11.72□□□□□ -0.53
RFFL-212ENST00000584655 FBXO28Q9NVF7 368 aa11.72□□□□□ -0.53
RFFL-212ENST00000584655 GLI3P10071 1580 aa11.72□□□□□ -0.53
RFFL-212ENST00000584655 SNW1Q13573 536 aaKnown RBP11.72□□□□□ -0.53
RFFL-212ENST00000584655 ARHGAP27Q6ZUM4 889 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms