RNA–Protein interactions for RNA: ENST00000584250.1

TTC39C-209, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 1 (best) BASIC

Gene TTC39C, Length 1,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-209ENST00000584250 RLFQ13129 1914 aa29.55■■■□□ 2.32
TTC39C-209ENST00000584250 TFAP4Q01664 338 aa29.55■■■□□ 2.32
TTC39C-209ENST00000584250 Q3C1V9 767 aa29.55■■■□□ 2.32
TTC39C-209ENST00000584250 CEP95Q96GE4 821 aa29.55■■■□□ 2.32
TTC39C-209ENST00000584250 CCDC136Q96JN2 1154 aa29.55■■■□□ 2.32
TTC39C-209ENST00000584250 MORF4L1Q9UBU8 362 aa29.55■■■□□ 2.32
TTC39C-209ENST00000584250 GABRQQ9UN88 632 aa29.55■■■□□ 2.32
TTC39C-209ENST00000584250 ZMYM6O95789 1325 aa29.54■■■□□ 2.32
TTC39C-209ENST00000584250 CNMDO75829 334 aa29.54■■■□□ 2.32
TTC39C-209ENST00000584250 SLC3A2P08195 630 aaKnown RBP29.54■■■□□ 2.32
TTC39C-209ENST00000584250 TBC1D10CQ8IV04 446 aa29.54■■■□□ 2.32
TTC39C-209ENST00000584250 NEDD1Q8NHV4 660 aa29.54■■■□□ 2.32
TTC39C-209ENST00000584250 PAGR1Q9BTK6 254 aa29.54■■■□□ 2.32
TTC39C-209ENST00000584250 ZNF287Q9HBT7 754 aa29.54■■■□□ 2.32
TTC39C-209ENST00000584250 SRRDQ9UH36 339 aa29.54■■■□□ 2.32
TTC39C-209ENST00000584250 FCGRTP55899 365 aa29.53■■■□□ 2.32
TTC39C-209ENST00000584250 PRKCZQ05513 592 aa29.53■■■□□ 2.32
TTC39C-209ENST00000584250 ARHGEF6Q15052 776 aa29.53■■■□□ 2.32
TTC39C-209ENST00000584250 MTMR4Q9NYA4 1195 aa29.53■■■□□ 2.32
TTC39C-209ENST00000584250 NYAP2Q9P242 653 aa29.53■■■□□ 2.32
TTC39C-209ENST00000584250 CLIP2Q9UDT6 1046 aa29.53■■■□□ 2.32
TTC39C-209ENST00000584250 MYH4Q9Y623 1939 aa29.53■■■□□ 2.32
TTC39C-209ENST00000584250 PLIN4Q96Q06 1357 aa29.52■■■□□ 2.32
TTC39C-209ENST00000584250 SPDYE16A6NNV3 312 aaPredicted RBP29.52■■■□□ 2.32
TTC39C-209ENST00000584250 NMT2O60551 498 aa29.52■■■□□ 2.32
TTC39C-209ENST00000584250 NEFLP07196 543 aa29.52■■■□□ 2.32
TTC39C-209ENST00000584250 FGRP09769 529 aa29.52■■■□□ 2.32
TTC39C-209ENST00000584250 TSPY3P0CV98 308 aa29.52■■■□□ 2.32
TTC39C-209ENST00000584250 TSPY8P0CW00 308 aa29.52■■■□□ 2.32
TTC39C-209ENST00000584250 MFAP1P55081 439 aaKnown RBP29.52■■■□□ 2.32
TTC39C-209ENST00000584250 TANGO6Q9C0B7 1094 aa29.52■■■□□ 2.32
TTC39C-209ENST00000584250 SH2D4AQ9H788 454 aa29.52■■■□□ 2.32
TTC39C-209ENST00000584250 RAD21O60216 631 aa29.51■■■□□ 2.31
TTC39C-209ENST00000584250 NUP88Q99567 741 aaPredicted RBP29.51■■■□□ 2.31
TTC39C-209ENST00000584250 IL17RBQ9NRM6 502 aa29.51■■■□□ 2.31
TTC39C-209ENST00000584250 BTBD7Q9P203 1132 aa29.51■■■□□ 2.31
TTC39C-209ENST00000584250 MYPNQ86TC9 1320 aa29.5■■■□□ 2.31
TTC39C-209ENST00000584250 TNPO2O14787 897 aaKnown RBP29.5■■■□□ 2.31
TTC39C-209ENST00000584250 ORC4O43929 436 aa29.5■■■□□ 2.31
TTC39C-209ENST00000584250 GNRH1P01148 92 aa29.5■■■□□ 2.31
TTC39C-209ENST00000584250 LPAR1Q92633 364 aa29.5■■■□□ 2.31
TTC39C-209ENST00000584250 PORCNQ9H237 461 aa29.5■■■□□ 2.31
TTC39C-209ENST00000584250 FBXO28Q9NVF7 368 aa29.5■■■□□ 2.31
TTC39C-209ENST00000584250 PARP14Q460N5 1801 aa29.5■■■□□ 2.31
TTC39C-209ENST00000584250 RANBP6O60518 1105 aaKnown RBP29.49■■■□□ 2.31
TTC39C-209ENST00000584250 SOX10P56693 466 aa29.49■■■□□ 2.31
TTC39C-209ENST00000584250 ERVK-9P63128 1117 aa29.49■■■□□ 2.31
TTC39C-209ENST00000584250 ERVK-24P63145 666 aa29.49■■■□□ 2.31
TTC39C-209ENST00000584250 RRP12Q5JTH9 1297 aaKnown RBP29.49■■■□□ 2.31
TTC39C-209ENST00000584250 LRRC47Q8N1G4 583 aaKnown RBP29.49■■■□□ 2.31
TTC39C-209ENST00000584250 GPRC5AQ8NFJ5 357 aa29.49■■■□□ 2.31
TTC39C-209ENST00000584250 SH3TC2Q8TF17 1288 aa29.49■■■□□ 2.31
TTC39C-209ENST00000584250 DSCC1Q9BVC3 393 aa29.49■■■□□ 2.31
TTC39C-209ENST00000584250 TOMM22Q9NS69 142 aa29.49■■■□□ 2.31
TTC39C-209ENST00000584250 LAMA4Q16363 1823 aa29.48■■■□□ 2.31
TTC39C-209ENST00000584250 WDR46O15213 610 aaKnown RBP29.48■■■□□ 2.31
TTC39C-209ENST00000584250 FAM83BQ5T0W9 1011 aa29.48■■■□□ 2.31
TTC39C-209ENST00000584250 SAMD1Q6SPF0 538 aaPredicted RBP29.48■■■□□ 2.31
TTC39C-209ENST00000584250 GOPCQ9HD26 462 aa29.48■■■□□ 2.31
TTC39C-209ENST00000584250 TSPY2A6NKD2 308 aa29.47■■■□□ 2.31
TTC39C-209ENST00000584250 F5H6K3 240 aa29.47■■■□□ 2.31
TTC39C-209ENST00000584250 NDUFB10O96000 172 aa29.47■■■□□ 2.31
TTC39C-209ENST00000584250 CENPBP07199 599 aaPredicted RBP29.47■■■□□ 2.31
TTC39C-209ENST00000584250 FLT3LGP49771 235 aa29.47■■■□□ 2.31
TTC39C-209ENST00000584250 PTH1RQ03431 593 aa29.47■■■□□ 2.31
TTC39C-209ENST00000584250 KLRC3Q07444 240 aa29.47■■■□□ 2.31
TTC39C-209ENST00000584250 COG2Q14746 738 aa29.47■■■□□ 2.31
TTC39C-209ENST00000584250 LBX2Q6XYB7 198 aa29.47■■■□□ 2.31
TTC39C-209ENST00000584250 RABGAP1Q9Y3P9 1069 aa29.47■■■□□ 2.31
TTC39C-209ENST00000584250 NEDD4P46934 1319 aa29.46■■■□□ 2.31
TTC39C-209ENST00000584250 PLXNB2O15031 1838 aa29.46■■■□□ 2.31
TTC39C-209ENST00000584250 FLOT1O75955 427 aa29.46■■■□□ 2.31
TTC39C-209ENST00000584250 TTLL1O95922 423 aa29.46■■■□□ 2.31
TTC39C-209ENST00000584250 HOXD10P28358 340 aa29.46■■■□□ 2.31
TTC39C-209ENST00000584250 AKNAD1Q5T1N1 836 aa29.46■■■□□ 2.31
TTC39C-209ENST00000584250 MKL1Q969V6 931 aa29.46■■■□□ 2.31
TTC39C-209ENST00000584250 CHMP4CQ96CF2 233 aa29.46■■■□□ 2.31
TTC39C-209ENST00000584250 ATG4CQ96DT6 458 aa29.46■■■□□ 2.31
TTC39C-209ENST00000584250 DSG3P32926 999 aa29.45■■■□□ 2.31
TTC39C-209ENST00000584250 STAG1Q8WVM7 1258 aa29.45■■■□□ 2.31
TTC39C-209ENST00000584250 ARMC5Q96C12 935 aa29.45■■■□□ 2.31
TTC39C-209ENST00000584250 CENPFP49454 3210 aa29.45■■■□□ 2.3
TTC39C-209ENST00000584250 A0A0G2JMZ2 1700 aa29.45■■■□□ 2.3
TTC39C-209ENST00000584250 RAD50Q92878 1312 aa29.45■■■□□ 2.3
TTC39C-209ENST00000584250 ZNF213O14771 459 aa29.44■■■□□ 2.3
TTC39C-209ENST00000584250 SGSM2O43147 1006 aa29.44■■■□□ 2.3
TTC39C-209ENST00000584250 MYCP01106 439 aaPredicted RBP29.44■■■□□ 2.3
TTC39C-209ENST00000584250 PRMT2P55345 433 aa29.44■■■□□ 2.3
TTC39C-209ENST00000584250 SLC9C1Q4G0N8 1177 aa29.44■■■□□ 2.3
TTC39C-209ENST00000584250 RASGRP2Q7LDG7 609 aa29.44■■■□□ 2.3
TTC39C-209ENST00000584250 RAET1EQ8TD07 263 aa29.44■■■□□ 2.3
TTC39C-209ENST00000584250 GTF3C2Q8WUA4 911 aaPredicted RBP29.44■■■□□ 2.3
TTC39C-209ENST00000584250 GJD2Q9UKL4 321 aa29.44■■■□□ 2.3
TTC39C-209ENST00000584250 MFSD6Q6ZSS7 791 aa29.43■■■□□ 2.3
TTC39C-209ENST00000584250 COA7Q96BR5 231 aa29.43■■■□□ 2.3
TTC39C-209ENST00000584250 ZNF333Q96JL9 665 aa29.43■■■□□ 2.3
TTC39C-209ENST00000584250 HOXC10Q9NYD6 342 aa29.43■■■□□ 2.3
TTC39C-209ENST00000584250 RUFY2Q8WXA3 655 aa29.42■■■□□ 2.3
TTC39C-209ENST00000584250 STX8Q9UNK0 236 aa29.42■■■□□ 2.3
TTC39C-209ENST00000584250 COL11A1P12107 1806 aaPredicted RBP29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms