RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 KIAA1755Q5JYT7 1200 aa18.92■□□□□ 0.62
SKA2-209ENST00000583976 CRNKL1Q9BZJ0 848 aaKnown RBP18.92■□□□□ 0.62
SKA2-209ENST00000583976 ARMT1Q9H993 441 aa18.92■□□□□ 0.62
SKA2-209ENST00000583976 MPHOSPH10O00566 681 aaKnown RBP18.91■□□□□ 0.62
SKA2-209ENST00000583976 LRRC26Q2I0M4 334 aa18.91■□□□□ 0.62
SKA2-209ENST00000583976 TRMT44Q8IYL2 757 aaKnown RBP18.91■□□□□ 0.62
SKA2-209ENST00000583976 NPLOC4Q8TAT6 608 aa18.91■□□□□ 0.62
SKA2-209ENST00000583976 KIF1BPQ96EK5 621 aa18.91■□□□□ 0.62
SKA2-209ENST00000583976 DYNLL2Q96FJ2 89 aa18.91■□□□□ 0.62
SKA2-209ENST00000583976 CABP5Q9NP86 173 aa18.91■□□□□ 0.62
SKA2-209ENST00000583976 DCP1AQ9NPI6 582 aaPredicted RBP18.91■□□□□ 0.62
SKA2-209ENST00000583976 PRKAB2O43741 272 aa18.9■□□□□ 0.62
SKA2-209ENST00000583976 RAB11FIP3O75154 756 aa18.9■□□□□ 0.62
SKA2-209ENST00000583976 MBD4O95243 580 aa18.9■□□□□ 0.62
SKA2-209ENST00000583976 PTPREP23469 700 aa18.9■□□□□ 0.62
SKA2-209ENST00000583976 CCNA1P78396 465 aa18.9■□□□□ 0.62
SKA2-209ENST00000583976 GRB14Q14449 540 aa18.9■□□□□ 0.62
SKA2-209ENST00000583976 TTF1Q15361 905 aaPredicted RBP18.9■□□□□ 0.62
SKA2-209ENST00000583976 LBX2Q6XYB7 198 aa18.9■□□□□ 0.62
SKA2-209ENST00000583976 CLASRPQ8N2M8 674 aaKnown RBP18.9■□□□□ 0.62
SKA2-209ENST00000583976 COL11A1P12107 1806 aaPredicted RBP18.89■□□□□ 0.61
SKA2-209ENST00000583976 LTBP2Q14767 1821 aa18.89■□□□□ 0.61
SKA2-209ENST00000583976 CYP2D7A0A087X1C5 515 aa18.89■□□□□ 0.61
SKA2-209ENST00000583976 IFIT2P09913 472 aaKnown RBP18.89■□□□□ 0.61
SKA2-209ENST00000583976 CYP2C19P33261 490 aa18.89■□□□□ 0.61
SKA2-209ENST00000583976 TRPV1Q8NER1 839 aa18.89■□□□□ 0.61
SKA2-209ENST00000583976 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.89■□□□□ 0.61
SKA2-209ENST00000583976 TANGO6Q9C0B7 1094 aa18.89■□□□□ 0.61
SKA2-209ENST00000583976 DCTPP1Q9H773 170 aa18.89■□□□□ 0.61
SKA2-209ENST00000583976 SLC15A5A6NIM6 579 aa18.88■□□□□ 0.61
SKA2-209ENST00000583976 SMARCA5O60264 1052 aaPredicted RBP18.88■□□□□ 0.61
SKA2-209ENST00000583976 AKR1B1P15121 316 aa18.88■□□□□ 0.61
SKA2-209ENST00000583976 TMED8Q6PL24 325 aaPredicted RBP18.88■□□□□ 0.61
SKA2-209ENST00000583976 BOLA2Q9H3K6 86 aa18.88■□□□□ 0.61
SKA2-209ENST00000583976 BMP8BP34820 402 aa18.87■□□□□ 0.61
SKA2-209ENST00000583976 ADD2P35612 726 aa18.87■□□□□ 0.61
SKA2-209ENST00000583976 MFSD14CQ5VZR4 134 aa18.87■□□□□ 0.61
SKA2-209ENST00000583976 SPICE1Q8N0Z3 855 aa18.87■□□□□ 0.61
SKA2-209ENST00000583976 MOV10L1Q9BXT6 1211 aaKnown RBP18.87■□□□□ 0.61
SKA2-209ENST00000583976 PAG1Q9NWQ8 432 aa18.87■□□□□ 0.61
SKA2-209ENST00000583976 IVNS1ABPQ9Y6Y0 642 aa18.87■□□□□ 0.61
SKA2-209ENST00000583976 GLRX3O76003 335 aaKnown RBP18.86■□□□□ 0.61
SKA2-209ENST00000583976 IGHDP01880 384 aa18.86■□□□□ 0.61
SKA2-209ENST00000583976 HOXC6P09630 235 aa18.86■□□□□ 0.61
SKA2-209ENST00000583976 HDAC1Q13547 482 aaPredicted RBP18.86■□□□□ 0.61
SKA2-209ENST00000583976 TMEM179Q6ZVK1 233 aa18.86■□□□□ 0.61
SKA2-209ENST00000583976 Q7L0L9 218 aa18.86■□□□□ 0.61
SKA2-209ENST00000583976 LRRCC1Q9C099 1032 aa18.86■□□□□ 0.61
SKA2-209ENST00000583976 RWDD1Q9H446 243 aaPredicted RBP18.86■□□□□ 0.61
SKA2-209ENST00000583976 DDX20Q9UHI6 824 aaKnown RBP18.86■□□□□ 0.61
SKA2-209ENST00000583976 GREB1LQ9C091 1923 aaPredicted RBP18.86■□□□□ 0.61
SKA2-209ENST00000583976 CYBAP13498 195 aa18.85■□□□□ 0.61
SKA2-209ENST00000583976 ADORA2AP29274 412 aa18.85■□□□□ 0.61
SKA2-209ENST00000583976 CNGA1P29973 690 aa18.85■□□□□ 0.61
SKA2-209ENST00000583976 MDM2Q00987 491 aaPredicted RBP18.85■□□□□ 0.61
SKA2-209ENST00000583976 ICA1Q05084 483 aa18.85■□□□□ 0.61
SKA2-209ENST00000583976 ANO1Q5XXA6 986 aa18.85■□□□□ 0.61
SKA2-209ENST00000583976 SAMD1Q6SPF0 538 aaPredicted RBP18.85■□□□□ 0.61
SKA2-209ENST00000583976 SIAH1Q8IUQ4 282 aa18.85■□□□□ 0.61
SKA2-209ENST00000583976 TDHQ8IZJ6 230 aa18.85■□□□□ 0.61
SKA2-209ENST00000583976 ATG4CQ96DT6 458 aa18.85■□□□□ 0.61
SKA2-209ENST00000583976 SPATC1LQ9H0A9 340 aa18.85■□□□□ 0.61
SKA2-209ENST00000583976 IGHA2P01877 340 aa18.84■□□□□ 0.61
SKA2-209ENST00000583976 NEFLP07196 543 aa18.84■□□□□ 0.61
SKA2-209ENST00000583976 ERCC3P19447 782 aa18.84■□□□□ 0.61
SKA2-209ENST00000583976 ATN1P54259 1190 aaPredicted RBP18.84■□□□□ 0.61
SKA2-209ENST00000583976 ATP2B2Q01814 1243 aa18.84■□□□□ 0.61
SKA2-209ENST00000583976 UBE2OQ9C0C9 1292 aaKnown RBP18.84■□□□□ 0.61
SKA2-209ENST00000583976 UNC80Q8N2C7 3258 aa18.83■□□□□ 0.61
SKA2-209ENST00000583976 HAUS7Q99871 368 aa18.83■□□□□ 0.6
SKA2-209ENST00000583976 SENP6Q9GZR1 1112 aaPredicted RBP18.83■□□□□ 0.6
SKA2-209ENST00000583976 SWAP70Q9UH65 585 aa18.83■□□□□ 0.6
SKA2-209ENST00000583976 EYSQ5T1H1 3165 aa18.83■□□□□ 0.6
SKA2-209ENST00000583976 A0A0C4DFX4 3053 aa18.82■□□□□ 0.6
SKA2-209ENST00000583976 COBLO75128 1261 aa18.82■□□□□ 0.6
SKA2-209ENST00000583976 FLOT1O75955 427 aa18.82■□□□□ 0.6
SKA2-209ENST00000583976 ATP5JP18859 108 aa18.82■□□□□ 0.6
SKA2-209ENST00000583976 PLS1Q14651 629 aa18.82■□□□□ 0.6
SKA2-209ENST00000583976 COG2Q14746 738 aa18.82■□□□□ 0.6
SKA2-209ENST00000583976 ANKRD45Q5TZF3 282 aa18.82■□□□□ 0.6
SKA2-209ENST00000583976 LPAR1Q92633 364 aa18.82■□□□□ 0.6
SKA2-209ENST00000583976 VCPKMTQ9H867 229 aa18.82■□□□□ 0.6
SKA2-209ENST00000583976 FBXO28Q9NVF7 368 aa18.82■□□□□ 0.6
SKA2-209ENST00000583976 DSG3P32926 999 aa18.81■□□□□ 0.6
SKA2-209ENST00000583976 GJC2Q5T442 439 aaPredicted RBP18.81■□□□□ 0.6
SKA2-209ENST00000583976 C12orf60Q5U649 245 aa18.81■□□□□ 0.6
SKA2-209ENST00000583976 B4GALNT3Q6L9W6 998 aa18.81■□□□□ 0.6
SKA2-209ENST00000583976 DPP9Q86TI2 863 aa18.81■□□□□ 0.6
SKA2-209ENST00000583976 TMX2Q9Y320 296 aa18.81■□□□□ 0.6
SKA2-209ENST00000583976 PLXNA1Q9UIW2 1896 aa18.81■□□□□ 0.6
SKA2-209ENST00000583976 CDH23Q9H251 3354 aa18.81■□□□□ 0.6
SKA2-209ENST00000583976 USP17L12C9JPN9 530 aa18.8■□□□□ 0.6
SKA2-209ENST00000583976 USP17L21D6R901 530 aa18.8■□□□□ 0.6
SKA2-209ENST00000583976 DNM1LO00429 736 aa18.8■□□□□ 0.6
SKA2-209ENST00000583976 CDK8P49336 464 aa18.8■□□□□ 0.6
SKA2-209ENST00000583976 LRIT3Q3SXY7 679 aa18.8■□□□□ 0.6
SKA2-209ENST00000583976 C16orf86Q6ZW13 317 aa18.8■□□□□ 0.6
SKA2-209ENST00000583976 NCAPG2Q86XI2 1143 aa18.8■□□□□ 0.6
SKA2-209ENST00000583976 DEFB123Q8N688 67 aa18.8■□□□□ 0.6
SKA2-209ENST00000583976 SHCBP1Q8NEM2 672 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms