RNA–Protein interactions for RNA: ENST00000583391.1

ERBB2-215, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-215ENST00000583391 MAP2K2P36507 400 aa15.32■□□□□ 0.04
ERBB2-215ENST00000583391 MOGSQ13724 837 aa15.32■□□□□ 0.04
ERBB2-215ENST00000583391 SART3Q15020 963 aaKnown RBP15.32■□□□□ 0.04
ERBB2-215ENST00000583391 SH3D19Q5HYK7 790 aa15.32■□□□□ 0.04
ERBB2-215ENST00000583391 TREML2Q5T2D2 321 aa15.32■□□□□ 0.04
ERBB2-215ENST00000583391 RCSD1Q6JBY9 416 aa15.32■□□□□ 0.04
ERBB2-215ENST00000583391 BLOC1S2Q6QNY1 142 aa15.32■□□□□ 0.04
ERBB2-215ENST00000583391 SPICE1Q8N0Z3 855 aa15.32■□□□□ 0.04
ERBB2-215ENST00000583391 DNAJC5GQ8N7S2 189 aa15.32■□□□□ 0.04
ERBB2-215ENST00000583391 PROCA1Q8NCQ7 364 aaPredicted RBP15.32■□□□□ 0.04
ERBB2-215ENST00000583391 CHMP4CQ96CF2 233 aa15.32■□□□□ 0.04
ERBB2-215ENST00000583391 VCPKMTQ9H867 229 aa15.32■□□□□ 0.04
ERBB2-215ENST00000583391 EMILIN3Q9NT22 766 aa15.32■□□□□ 0.04
ERBB2-215ENST00000583391 BAZ2BQ9UIF8 2168 aaKnown RBP15.31■□□□□ 0.04
ERBB2-215ENST00000583391 ERICH2A1L162 156 aa15.31■□□□□ 0.04
ERBB2-215ENST00000583391 BTBD19C9JJ37 291 aa15.31■□□□□ 0.04
ERBB2-215ENST00000583391 IGF2BP3O00425 579 aaKnown RBP eCLIP15.31■□□□□ 0.04
ERBB2-215ENST00000583391 TOP1P11387 765 aaKnown RBP15.31■□□□□ 0.04
ERBB2-215ENST00000583391 VCAM1P19320 739 aa15.31■□□□□ 0.04
ERBB2-215ENST00000583391 NOVP48745 357 aa15.31■□□□□ 0.04
ERBB2-215ENST00000583391 ANAPC15P60006 121 aa15.31■□□□□ 0.04
ERBB2-215ENST00000583391 WTAPQ15007 396 aa15.31■□□□□ 0.04
ERBB2-215ENST00000583391 SEC23AQ15436 765 aa15.31■□□□□ 0.04
ERBB2-215ENST00000583391 CCDC178Q5BJE1 867 aa15.31■□□□□ 0.04
ERBB2-215ENST00000583391 TMEM67Q5HYA8 995 aa15.31■□□□□ 0.04
ERBB2-215ENST00000583391 KIAA1755Q5JYT7 1200 aa15.31■□□□□ 0.04
ERBB2-215ENST00000583391 IFIT1BQ5T764 474 aaKnown RBP15.31■□□□□ 0.04
ERBB2-215ENST00000583391 FASTKD5Q7L8L6 764 aaKnown RBP15.31■□□□□ 0.04
ERBB2-215ENST00000583391 RASGRP2Q7LDG7 609 aa15.31■□□□□ 0.04
ERBB2-215ENST00000583391 C12orf42Q96LP6 360 aa15.31■□□□□ 0.04
ERBB2-215ENST00000583391 TMEM47Q9BQJ4 181 aa15.31■□□□□ 0.04
ERBB2-215ENST00000583391 C22orf23Q9BZE7 217 aa15.31■□□□□ 0.04
ERBB2-215ENST00000583391 GPHNQ9NQX3 736 aaPredicted RBP15.31■□□□□ 0.04
ERBB2-215ENST00000583391 MGAMO43451 1857 aa15.31■□□□□ 0.04
ERBB2-215ENST00000583391 TESPA1A2RU30 521 aaPredicted RBP15.3■□□□□ 0.04
ERBB2-215ENST00000583391 SH2B2O14492 632 aaPredicted RBP15.3■□□□□ 0.04
ERBB2-215ENST00000583391 NDUFB10O96000 172 aa15.3■□□□□ 0.04
ERBB2-215ENST00000583391 HMGB1P09429 215 aaKnown RBP15.3■□□□□ 0.04
ERBB2-215ENST00000583391 PSMA5P28066 241 aa15.3■□□□□ 0.04
ERBB2-215ENST00000583391 DHX32Q7L7V1 743 aaKnown RBP15.3■□□□□ 0.04
ERBB2-215ENST00000583391 DGKHQ86XP1 1220 aa15.3■□□□□ 0.04
ERBB2-215ENST00000583391 IFNL1Q8IU54 200 aa15.3■□□□□ 0.04
ERBB2-215ENST00000583391 FAM43AQ8N2R8 423 aa15.3■□□□□ 0.04
ERBB2-215ENST00000583391 WDR19Q8NEZ3 1342 aa15.3■□□□□ 0.04
ERBB2-215ENST00000583391 MKL1Q969V6 931 aa15.3■□□□□ 0.04
ERBB2-215ENST00000583391 PTPN18Q99952 460 aa15.3■□□□□ 0.04
ERBB2-215ENST00000583391 UPF3BQ9BZI7 483 aaKnown RBP15.3■□□□□ 0.04
ERBB2-215ENST00000583391 KAT14Q9H8E8 782 aa15.3■□□□□ 0.04
ERBB2-215ENST00000583391 SENP2Q9HC62 589 aa15.3■□□□□ 0.04
ERBB2-215ENST00000583391 ISY1Q9ULR0 285 aaKnown RBP15.3■□□□□ 0.04
ERBB2-215ENST00000583391 AGTPBP1Q9UPW5 1226 aa15.3■□□□□ 0.04
ERBB2-215ENST00000583391 F5H6K3 240 aa15.29■□□□□ 0.04
ERBB2-215ENST00000583391 RPS6KB1P23443 525 aa15.29■□□□□ 0.04
ERBB2-215ENST00000583391 KLRC3Q07444 240 aa15.29■□□□□ 0.04
ERBB2-215ENST00000583391 GPAT2Q6NUI2 795 aa15.29■□□□□ 0.04
ERBB2-215ENST00000583391 ANKRD23Q86SG2 305 aa15.29■□□□□ 0.04
ERBB2-215ENST00000583391 PNMA1Q8ND90 353 aa15.29■□□□□ 0.04
ERBB2-215ENST00000583391 GMCL1P1Q8NEA9 526 aa15.29■□□□□ 0.04
ERBB2-215ENST00000583391 LPAR1Q92633 364 aa15.29■□□□□ 0.04
ERBB2-215ENST00000583391 TMEM87BQ96K49 555 aa15.29■□□□□ 0.04
ERBB2-215ENST00000583391 TTC14Q96N46 770 aa15.29■□□□□ 0.04
ERBB2-215ENST00000583391 NUP88Q99567 741 aaPredicted RBP15.29■□□□□ 0.04
ERBB2-215ENST00000583391 TANGO6Q9C0B7 1094 aa15.29■□□□□ 0.04
ERBB2-215ENST00000583391 RPAP3Q9H6T3 665 aaPredicted RBP15.29■□□□□ 0.04
ERBB2-215ENST00000583391 LY9Q9HBG7 655 aa15.29■□□□□ 0.04
ERBB2-215ENST00000583391 SYNPO2Q9UMS6 1093 aa15.29■□□□□ 0.04
ERBB2-215ENST00000583391 ZSWIM8A7E2V4 1837 aa15.29■□□□□ 0.04
ERBB2-215ENST00000583391 PDHXO00330 501 aa15.28■□□□□ 0.04
ERBB2-215ENST00000583391 WDR46O15213 610 aaKnown RBP15.28■□□□□ 0.04
ERBB2-215ENST00000583391 TM4SF4P48230 202 aa15.28■□□□□ 0.04
ERBB2-215ENST00000583391 INHBEP58166 350 aa15.28■□□□□ 0.04
ERBB2-215ENST00000583391 FGD1P98174 961 aa15.28■□□□□ 0.04
ERBB2-215ENST00000583391 EXOSC10Q01780 885 aaKnown RBP15.28■□□□□ 0.04
ERBB2-215ENST00000583391 FAM83BQ5T0W9 1011 aa15.28■□□□□ 0.04
ERBB2-215ENST00000583391 SLFN13Q68D06 897 aa15.28■□□□□ 0.04
ERBB2-215ENST00000583391 NFXL1Q6ZNB6 911 aa15.28■□□□□ 0.04
ERBB2-215ENST00000583391 RUFY3Q7L099 469 aa15.28■□□□□ 0.04
ERBB2-215ENST00000583391 REM2Q8IYK8 340 aaPredicted RBP15.28■□□□□ 0.04
ERBB2-215ENST00000583391 IGDCC4Q8TDY8 1250 aa15.28■□□□□ 0.04
ERBB2-215ENST00000583391 TM6SF1Q9BZW5 370 aa15.28■□□□□ 0.04
ERBB2-215ENST00000583391 ZSWIM6Q9HCJ5 1215 aa15.28■□□□□ 0.04
ERBB2-215ENST00000583391 CYP46A1Q9Y6A2 500 aa15.28■□□□□ 0.04
ERBB2-215ENST00000583391 RBM25P49756 843 aaKnown RBP15.27■□□□□ 0.04
ERBB2-215ENST00000583391 IRX3P78415 501 aaPredicted RBP15.27■□□□□ 0.04
ERBB2-215ENST00000583391 PABPC4Q13310 644 aaKnown RBP eCLIP15.27■□□□□ 0.04
ERBB2-215ENST00000583391 TAF1CQ15572 869 aaPredicted RBP15.27■□□□□ 0.04
ERBB2-215ENST00000583391 CCDC96Q2M329 555 aa15.27■□□□□ 0.04
ERBB2-215ENST00000583391 OTUD7BQ6GQQ9 843 aa15.27■□□□□ 0.04
ERBB2-215ENST00000583391 Q6ZUG5 572 aa15.27■□□□□ 0.04
ERBB2-215ENST00000583391 ANKS1AQ92625 1134 aa15.27■□□□□ 0.04
ERBB2-215ENST00000583391 TBC1D32Q96NH3 1257 aa15.27■□□□□ 0.04
ERBB2-215ENST00000583391 MTA3Q9BTC8 594 aa15.27■□□□□ 0.04
ERBB2-215ENST00000583391 SMCHD1A6NHR9 2005 aa15.27■□□□□ 0.03
ERBB2-215ENST00000583391 RBBP6Q7Z6E9 1792 aaKnown RBP15.26■□□□□ 0.03
ERBB2-215ENST00000583391 FRMPD2Q68DX3 1309 aaPredicted RBP15.26■□□□□ 0.03
ERBB2-215ENST00000583391 CCDC69A6NI79 296 aa15.26■□□□□ 0.03
ERBB2-215ENST00000583391 SLC1A4P43007 532 aa15.26■□□□□ 0.03
ERBB2-215ENST00000583391 SAMD1Q6SPF0 538 aaPredicted RBP15.26■□□□□ 0.03
ERBB2-215ENST00000583391 DCAF4Q8WV16 495 aa15.26■□□□□ 0.03
ERBB2-215ENST00000583391 IL17RAQ96F46 866 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms