RNA–Protein interactions for RNA: ENST00000583340.1

SUPT6H-208, Transcript of SPT6 homolog, histone chaperone, humanhuman

TSL 3

Gene SUPT6H, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT6H-208ENST00000583340 CASC1Q6TDU7 716 aa10.13□□□□□ -0.79
SUPT6H-208ENST00000583340 MB21D1Q8N884 522 aa10.13□□□□□ -0.79
SUPT6H-208ENST00000583340 RAET1EQ8TD07 263 aa10.13□□□□□ -0.79
SUPT6H-208ENST00000583340 ACER1Q8TDN7 264 aa10.13□□□□□ -0.79
SUPT6H-208ENST00000583340 TANGO6Q9C0B7 1094 aa10.13□□□□□ -0.79
SUPT6H-208ENST00000583340 RPAP3Q9H6T3 665 aaPredicted RBP10.13□□□□□ -0.79
SUPT6H-208ENST00000583340 VCPKMTQ9H867 229 aa10.13□□□□□ -0.79
SUPT6H-208ENST00000583340 TOMM22Q9NS69 142 aa10.13□□□□□ -0.79
SUPT6H-208ENST00000583340 HOXC10Q9NYD6 342 aa10.13□□□□□ -0.79
SUPT6H-208ENST00000583340 NYAP2Q9P242 653 aa10.13□□□□□ -0.79
SUPT6H-208ENST00000583340 ANAPC4Q9UJX5 808 aa10.13□□□□□ -0.79
SUPT6H-208ENST00000583340 TMX2Q9Y320 296 aa10.13□□□□□ -0.79
SUPT6H-208ENST00000583340 MYPNQ86TC9 1320 aa10.12□□□□□ -0.79
SUPT6H-208ENST00000583340 RAD21O60216 631 aa10.12□□□□□ -0.79
SUPT6H-208ENST00000583340 EEF2P13639 858 aaKnown RBP10.12□□□□□ -0.79
SUPT6H-208ENST00000583340 MAPK4P31152 587 aa10.12□□□□□ -0.79
SUPT6H-208ENST00000583340 COG2Q14746 738 aa10.12□□□□□ -0.79
SUPT6H-208ENST00000583340 CATSPERGQ6ZRH7 1159 aa10.12□□□□□ -0.79
SUPT6H-208ENST00000583340 STK11IPQ8N1F8 1099 aa10.12□□□□□ -0.79
SUPT6H-208ENST00000583340 P2RX7Q99572 595 aaKnown RBP10.12□□□□□ -0.79
SUPT6H-208ENST00000583340 DSCC1Q9BVC3 393 aa10.12□□□□□ -0.79
SUPT6H-208ENST00000583340 MORF4L1Q9UBU8 362 aa10.12□□□□□ -0.79
SUPT6H-208ENST00000583340 DAXXQ9UER7 740 aaPredicted RBP10.12□□□□□ -0.79
SUPT6H-208ENST00000583340 SRRDQ9UH36 339 aa10.12□□□□□ -0.79
SUPT6H-208ENST00000583340 RABGAP1Q9Y3P9 1069 aa10.12□□□□□ -0.79
SUPT6H-208ENST00000583340 PLIN4Q96Q06 1357 aa10.12□□□□□ -0.79
SUPT6H-208ENST00000583340 ZNF213O14771 459 aa10.11□□□□□ -0.79
SUPT6H-208ENST00000583340 ORC4O43929 436 aa10.11□□□□□ -0.79
SUPT6H-208ENST00000583340 RANBP6O60518 1105 aaKnown RBP10.11□□□□□ -0.79
SUPT6H-208ENST00000583340 PRDM1O75626 825 aa10.11□□□□□ -0.79
SUPT6H-208ENST00000583340 FLOT1O75955 427 aa10.11□□□□□ -0.79
SUPT6H-208ENST00000583340 FGAP02671 866 aa10.11□□□□□ -0.79
SUPT6H-208ENST00000583340 ERVK-9P63128 1117 aa10.11□□□□□ -0.79
SUPT6H-208ENST00000583340 ERVK-24P63145 666 aa10.11□□□□□ -0.79
SUPT6H-208ENST00000583340 EVX2Q03828 476 aa10.11□□□□□ -0.79
SUPT6H-208ENST00000583340 IMMTQ16891 758 aaKnown RBP10.11□□□□□ -0.79
SUPT6H-208ENST00000583340 CCDC178Q5BJE1 867 aa10.11□□□□□ -0.79
SUPT6H-208ENST00000583340 LBX2Q6XYB7 198 aa10.11□□□□□ -0.79
SUPT6H-208ENST00000583340 MFSD6Q6ZSS7 791 aa10.11□□□□□ -0.79
SUPT6H-208ENST00000583340 ZNF589Q86UQ0 364 aaPredicted RBP10.11□□□□□ -0.79
SUPT6H-208ENST00000583340 NEDD1Q8NHV4 660 aa10.11□□□□□ -0.79
SUPT6H-208ENST00000583340 SOCS4Q8WXH5 440 aa10.11□□□□□ -0.79
SUPT6H-208ENST00000583340 TRIM47Q96LD4 638 aa10.11□□□□□ -0.79
SUPT6H-208ENST00000583340 PAGR1Q9BTK6 254 aa10.11□□□□□ -0.79
SUPT6H-208ENST00000583340 CTDP1Q9Y5B0 961 aaPredicted RBP10.11□□□□□ -0.79
SUPT6H-208ENST00000583340 A0A1W2PRG0 241 aa10.1□□□□□ -0.79
SUPT6H-208ENST00000583340 GSPT1P15170 499 aaKnown RBP10.1□□□□□ -0.79
SUPT6H-208ENST00000583340 COPB2P35606 906 aa10.1□□□□□ -0.79
SUPT6H-208ENST00000583340 UBXN2AP68543 259 aa10.1□□□□□ -0.79
SUPT6H-208ENST00000583340 TFAP4Q01664 338 aa10.1□□□□□ -0.79
SUPT6H-208ENST00000583340 CTDSPL2Q05D32 466 aa10.1□□□□□ -0.79
SUPT6H-208ENST00000583340 RRP12Q5JTH9 1297 aaKnown RBP10.1□□□□□ -0.79
SUPT6H-208ENST00000583340 AKNAD1Q5T1N1 836 aa10.1□□□□□ -0.79
SUPT6H-208ENST00000583340 VPS53Q5VIR6 699 aa10.1□□□□□ -0.79
SUPT6H-208ENST00000583340 KIAA1211Q6ZU35 1233 aa10.1□□□□□ -0.79
SUPT6H-208ENST00000583340 TRMT44Q8IYL2 757 aaKnown RBP10.1□□□□□ -0.79
SUPT6H-208ENST00000583340 SLAIN1Q8ND83 568 aa10.1□□□□□ -0.79
SUPT6H-208ENST00000583340 ESR2Q92731 530 aa10.1□□□□□ -0.79
SUPT6H-208ENST00000583340 ARMC5Q96C12 935 aa10.1□□□□□ -0.79
SUPT6H-208ENST00000583340 TMEM106CQ9BVX2 250 aa10.1□□□□□ -0.79
SUPT6H-208ENST00000583340 ARHGAP39Q9C0H5 1083 aa10.1□□□□□ -0.79
SUPT6H-208ENST00000583340 CNNM2Q9H8M5 875 aa10.1□□□□□ -0.79
SUPT6H-208ENST00000583340 MTMR4Q9NYA4 1195 aa10.1□□□□□ -0.79
SUPT6H-208ENST00000583340 BIN2Q9UBW5 565 aaPredicted RBP10.1□□□□□ -0.79
SUPT6H-208ENST00000583340 CLIP2Q9UDT6 1046 aa10.1□□□□□ -0.79
SUPT6H-208ENST00000583340 STX8Q9UNK0 236 aa10.1□□□□□ -0.79
SUPT6H-208ENST00000583340 PTCH2Q9Y6C5 1203 aa10.1□□□□□ -0.79
SUPT6H-208ENST00000583340 IVNS1ABPQ9Y6Y0 642 aa10.1□□□□□ -0.79
SUPT6H-208ENST00000583340 IGKV6D-41A0A0C4DH26 115 aa10.09□□□□□ -0.79
SUPT6H-208ENST00000583340 SPDYE16A6NNV3 312 aaPredicted RBP10.09□□□□□ -0.79
SUPT6H-208ENST00000583340 CDC45O75419 566 aa10.09□□□□□ -0.79
SUPT6H-208ENST00000583340 CHMLP26374 656 aa10.09□□□□□ -0.79
SUPT6H-208ENST00000583340 GRK4P32298 578 aa10.09□□□□□ -0.79
SUPT6H-208ENST00000583340 TRDNQ13061 729 aa10.09□□□□□ -0.79
SUPT6H-208ENST00000583340 IRF5Q13568 498 aa10.09□□□□□ -0.79
SUPT6H-208ENST00000583340 BECN1Q14457 450 aa10.09□□□□□ -0.79
SUPT6H-208ENST00000583340 IQCA1Q86XH1 822 aa10.09□□□□□ -0.79
SUPT6H-208ENST00000583340 SPICE1Q8N0Z3 855 aa10.09□□□□□ -0.79
SUPT6H-208ENST00000583340 GMCL1P1Q8NEA9 526 aa10.09□□□□□ -0.79
SUPT6H-208ENST00000583340 STAG1Q8WVM7 1258 aa10.09□□□□□ -0.79
SUPT6H-208ENST00000583340 MKL1Q969V6 931 aa10.09□□□□□ -0.79
SUPT6H-208ENST00000583340 CEP95Q96GE4 821 aa10.09□□□□□ -0.79
SUPT6H-208ENST00000583340 NUDT12Q9BQG2 462 aa10.09□□□□□ -0.79
SUPT6H-208ENST00000583340 KRT23Q9C075 422 aa10.09□□□□□ -0.79
SUPT6H-208ENST00000583340 SLC5A4Q9NY91 659 aa10.09□□□□□ -0.79
SUPT6H-208ENST00000583340 ISY1Q9ULR0 285 aaKnown RBP10.09□□□□□ -0.79
SUPT6H-208ENST00000583340 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.09□□□□□ -0.79
SUPT6H-208ENST00000583340 U3KPZ7 1027 aaPredicted RBP10.09□□□□□ -0.79
SUPT6H-208ENST00000583340 F5H6K3 240 aa10.08□□□□□ -0.8
SUPT6H-208ENST00000583340 SMIM22K7EJ46 135 aa10.08□□□□□ -0.8
SUPT6H-208ENST00000583340 FOXP2O15409 715 aa10.08□□□□□ -0.8
SUPT6H-208ENST00000583340 ECM2O94769 699 aaPredicted RBP10.08□□□□□ -0.8
SUPT6H-208ENST00000583340 FGRP09769 529 aa10.08□□□□□ -0.8
SUPT6H-208ENST00000583340 FDX1P10109 184 aa10.08□□□□□ -0.8
SUPT6H-208ENST00000583340 CAPN2P17655 700 aa10.08□□□□□ -0.8
SUPT6H-208ENST00000583340 DSG3P32926 999 aa10.08□□□□□ -0.8
SUPT6H-208ENST00000583340 HAND2P61296 217 aa10.08□□□□□ -0.8
SUPT6H-208ENST00000583340 PRKCZQ05513 592 aa10.08□□□□□ -0.8
SUPT6H-208ENST00000583340 KLRC3Q07444 240 aa10.08□□□□□ -0.8
SUPT6H-208ENST00000583340 FAM47AQ5JRC9 791 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms