RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 GNPTABQ3T906 1256 aa8.54□□□□□ -1.04
SMARCE1-219ENST00000583294 NBPF6Q5VWK0 638 aa8.54□□□□□ -1.04
SMARCE1-219ENST00000583294 C6orf15Q6UXA7 325 aaPredicted RBP8.54□□□□□ -1.04
SMARCE1-219ENST00000583294 ZNF765Q7L2R6 523 aa8.54□□□□□ -1.04
SMARCE1-219ENST00000583294 DHRS1Q96LJ7 313 aa8.54□□□□□ -1.04
SMARCE1-219ENST00000583294 NBPF4Q96M43 638 aa8.54□□□□□ -1.04
SMARCE1-219ENST00000583294 KREMEN1Q96MU8 473 aa8.54□□□□□ -1.04
SMARCE1-219ENST00000583294 OSBPL2Q9H1P3 480 aa8.54□□□□□ -1.04
SMARCE1-219ENST00000583294 ZSWIM4Q9H7M6 989 aa8.54□□□□□ -1.04
SMARCE1-219ENST00000583294 ADAMTS4O75173 837 aa8.53□□□□□ -1.04
SMARCE1-219ENST00000583294 ETV3P41162 512 aa8.53□□□□□ -1.04
SMARCE1-219ENST00000583294 DDR2Q16832 855 aa8.53□□□□□ -1.04
SMARCE1-219ENST00000583294 VHLLQ6RSH7 139 aa8.53□□□□□ -1.04
SMARCE1-219ENST00000583294 PPFIBP1Q86W92 1011 aa8.53□□□□□ -1.04
SMARCE1-219ENST00000583294 PHAXQ9H814 394 aaKnown RBP8.53□□□□□ -1.04
SMARCE1-219ENST00000583294 SUCOQ9UBS9 1254 aaKnown RBP8.53□□□□□ -1.04
SMARCE1-219ENST00000583294 ZNF214Q9UL59 606 aaPredicted RBP8.53□□□□□ -1.04
SMARCE1-219ENST00000583294 C9IYK1 514 aa8.52□□□□□ -1.05
SMARCE1-219ENST00000583294 GJB6O95452 261 aa8.52□□□□□ -1.05
SMARCE1-219ENST00000583294 CBX7O95931 251 aa8.52□□□□□ -1.05
SMARCE1-219ENST00000583294 PMS1P54277 932 aaKnown RBP8.52□□□□□ -1.05
SMARCE1-219ENST00000583294 SLC7A5Q01650 507 aa8.52□□□□□ -1.05
SMARCE1-219ENST00000583294 SERINC3Q13530 473 aa8.52□□□□□ -1.05
SMARCE1-219ENST00000583294 BMS1Q14692 1282 aaKnown RBP8.52□□□□□ -1.05
SMARCE1-219ENST00000583294 CYP27C1Q4G0S4 372 aa8.52□□□□□ -1.05
SMARCE1-219ENST00000583294 DUSP27Q5VZP5 1158 aa8.52□□□□□ -1.05
SMARCE1-219ENST00000583294 KIAA1211LQ6NV74 962 aa8.52□□□□□ -1.05
SMARCE1-219ENST00000583294 FAM178BQ8IXR5 827 aa8.52□□□□□ -1.05
SMARCE1-219ENST00000583294 HEXIM2Q96MH2 286 aaKnown RBP8.52□□□□□ -1.05
SMARCE1-219ENST00000583294 PRDM5Q9NQX1 630 aaPredicted RBP8.52□□□□□ -1.05
SMARCE1-219ENST00000583294 ATG3Q9NT62 314 aa8.52□□□□□ -1.05
SMARCE1-219ENST00000583294 SIRPGQ9P1W8 387 aa8.52□□□□□ -1.05
SMARCE1-219ENST00000583294 LRRN2O75325 713 aa8.51□□□□□ -1.05
SMARCE1-219ENST00000583294 CYP7A1P22680 504 aa8.51□□□□□ -1.05
SMARCE1-219ENST00000583294 GRIK1P39086 918 aa8.51□□□□□ -1.05
SMARCE1-219ENST00000583294 SFRP5Q5T4F7 317 aa8.51□□□□□ -1.05
SMARCE1-219ENST00000583294 NBPF12Q5TAG4 269 aaPredicted RBP8.51□□□□□ -1.05
SMARCE1-219ENST00000583294 ZNF746Q6NUN9 644 aaPredicted RBP8.51□□□□□ -1.05
SMARCE1-219ENST00000583294 INTS5Q6P9B9 1019 aaKnown RBP8.51□□□□□ -1.05
SMARCE1-219ENST00000583294 FAM214BQ7L5A3 538 aa8.51□□□□□ -1.05
SMARCE1-219ENST00000583294 CCDC144CPQ8IYA2 1237 aa8.51□□□□□ -1.05
SMARCE1-219ENST00000583294 OSBPL1AQ9BXW6 950 aa8.51□□□□□ -1.05
SMARCE1-219ENST00000583294 MKRN2Q9H000 416 aaKnown RBP8.51□□□□□ -1.05
SMARCE1-219ENST00000583294 MAPK8IP1Q9UQF2 711 aa8.51□□□□□ -1.05
SMARCE1-219ENST00000583294 COL17A1Q9UMD9 1497 aaPredicted RBP8.51□□□□□ -1.05
SMARCE1-219ENST00000583294 SPINK2P20155 84 aa8.5□□□□□ -1.05
SMARCE1-219ENST00000583294 HOXA10P31260 410 aaPredicted RBP8.5□□□□□ -1.05
SMARCE1-219ENST00000583294 CYP27A1Q02318 531 aa8.5□□□□□ -1.05
SMARCE1-219ENST00000583294 KLHL6Q8WZ60 621 aa8.5□□□□□ -1.05
SMARCE1-219ENST00000583294 GTF2IRD1Q9UHL9 959 aa8.5□□□□□ -1.05
SMARCE1-219ENST00000583294 OAS3Q9Y6K5 1087 aaKnown RBP8.5□□□□□ -1.05
SMARCE1-219ENST00000583294 PRR33A8MZF0 331 aa8.49□□□□□ -1.05
SMARCE1-219ENST00000583294 GP2P55259 537 aaKnown RBP8.49□□□□□ -1.05
SMARCE1-219ENST00000583294 RNF4P78317 190 aa8.49□□□□□ -1.05
SMARCE1-219ENST00000583294 BBS9Q3SYG4 887 aa8.49□□□□□ -1.05
SMARCE1-219ENST00000583294 AXDND1Q5T1B0 1012 aaPredicted RBP8.49□□□□□ -1.05
SMARCE1-219ENST00000583294 DCAF15Q66K64 600 aa8.49□□□□□ -1.05
SMARCE1-219ENST00000583294 MCTP1Q6DN14 999 aa8.49□□□□□ -1.05
SMARCE1-219ENST00000583294 FAM181AQ8N9Y4 354 aa8.49□□□□□ -1.05
SMARCE1-219ENST00000583294 RNF141Q8WVD5 230 aa8.49□□□□□ -1.05
SMARCE1-219ENST00000583294 VWCEQ96DN2 955 aa8.49□□□□□ -1.05
SMARCE1-219ENST00000583294 SRPK1Q96SB4 655 aaKnown RBP8.49□□□□□ -1.05
SMARCE1-219ENST00000583294 PIF1Q9H611 641 aa8.49□□□□□ -1.05
SMARCE1-219ENST00000583294 LRRC4CQ9HCJ2 640 aa8.49□□□□□ -1.05
SMARCE1-219ENST00000583294 NCAPHQ15003 741 aa8.48□□□□□ -1.05
SMARCE1-219ENST00000583294 MRM1Q6IN84 353 aaKnown RBP8.48□□□□□ -1.05
SMARCE1-219ENST00000583294 ARHGAP27Q6ZUM4 889 aa8.48□□□□□ -1.05
SMARCE1-219ENST00000583294 DTX1Q86Y01 620 aa8.48□□□□□ -1.05
SMARCE1-219ENST00000583294 ASPNQ9BXN1 380 aa8.48□□□□□ -1.05
SMARCE1-219ENST00000583294 CDK11AQ9UQ88 783 aaPredicted RBP8.48□□□□□ -1.05
SMARCE1-219ENST00000583294 U3KQE9 123 aa8.48□□□□□ -1.05
SMARCE1-219ENST00000583294 FAM221BA6H8Z2 402 aa8.47□□□□□ -1.05
SMARCE1-219ENST00000583294 ITIH2P19823 946 aa8.47□□□□□ -1.05
SMARCE1-219ENST00000583294 Q96M66 194 aa8.47□□□□□ -1.05
SMARCE1-219ENST00000583294 FBXL18Q96ME1 805 aa8.47□□□□□ -1.05
SMARCE1-219ENST00000583294 DEPDC7Q96QD5 511 aa8.47□□□□□ -1.05
SMARCE1-219ENST00000583294 SNTG2Q9NY99 539 aa8.47□□□□□ -1.05
SMARCE1-219ENST00000583294 FBXL21Q9UKT6 434 aa8.47□□□□□ -1.05
SMARCE1-219ENST00000583294 GNAT3A8MTJ3 354 aa8.46□□□□□ -1.06
SMARCE1-219ENST00000583294 AUHQ13825 339 aaKnown RBP8.46□□□□□ -1.06
SMARCE1-219ENST00000583294 HEATR6Q6AI08 1181 aaKnown RBP8.46□□□□□ -1.06
SMARCE1-219ENST00000583294 HAUS7Q99871 368 aa8.46□□□□□ -1.06
SMARCE1-219ENST00000583294 METTL22Q9BUU2 404 aaPredicted RBP8.46□□□□□ -1.06
SMARCE1-219ENST00000583294 PIM2Q9P1W9 311 aa8.46□□□□□ -1.06
SMARCE1-219ENST00000583294 LEMD3Q9Y2U8 911 aa8.46□□□□□ -1.06
SMARCE1-219ENST00000583294 MSRB2Q9Y3D2 182 aa8.46□□□□□ -1.06
SMARCE1-219ENST00000583294 IGF2BP3O00425 579 aaKnown RBP eCLIP8.45□□□□□ -1.06
SMARCE1-219ENST00000583294 PDPK1O15530 556 aa8.45□□□□□ -1.06
SMARCE1-219ENST00000583294 EPHX1P07099 455 aa8.45□□□□□ -1.06
SMARCE1-219ENST00000583294 IRAK1P51617 712 aa8.45□□□□□ -1.06
SMARCE1-219ENST00000583294 SNW1Q13573 536 aaKnown RBP8.45□□□□□ -1.06
SMARCE1-219ENST00000583294 RASA3Q14644 834 aa8.45□□□□□ -1.06
SMARCE1-219ENST00000583294 NFE2L2Q16236 605 aa8.45□□□□□ -1.06
SMARCE1-219ENST00000583294 NBPF9Q3BBW0 867 aa8.45□□□□□ -1.06
SMARCE1-219ENST00000583294 C7orf61Q8IZ16 206 aa8.45□□□□□ -1.06
SMARCE1-219ENST00000583294 SMARCC1Q92922 1105 aaPredicted RBP8.45□□□□□ -1.06
SMARCE1-219ENST00000583294 MKL1Q969V6 931 aa8.45□□□□□ -1.06
SMARCE1-219ENST00000583294 MRFAP1L1Q96HT8 127 aa8.45□□□□□ -1.06
SMARCE1-219ENST00000583294 FGD4Q96M96 766 aa8.45□□□□□ -1.06
SMARCE1-219ENST00000583294 CCDC113Q9H0I3 377 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms