RNA–Protein interactions for RNA: ENST00000583226.1

NCOR1-223, Transcript of nuclear receptor corepressor 1, human

TSL 5

Gene NCOR1, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCOR1-223	ENST00000583226	GSK3A	P49840	483 aa		10.22	□□□□□ -0.77
NCOR1-223	ENST00000583226	TYRO3	Q06418	890 aa		10.22	□□□□□ -0.77
NCOR1-223	ENST00000583226	HIF1A	Q16665	826 aa		10.22	□□□□□ -0.77
NCOR1-223	ENST00000583226	TTLL7	Q6ZT98	887 aa		10.22	□□□□□ -0.77
NCOR1-223	ENST00000583226	BTLA	Q7Z6A9	289 aa		10.22	□□□□□ -0.77
NCOR1-223	ENST00000583226	SYT9	Q86SS6	491 aa		10.22	□□□□□ -0.77
NCOR1-223	ENST00000583226	NGEF	Q8N5V2	710 aa		10.22	□□□□□ -0.77
NCOR1-223	ENST00000583226	SLC30A3	Q99726	388 aa		10.22	□□□□□ -0.77
NCOR1-223	ENST00000583226	ASTN2	O75129	1339 aa	Predicted RBP	10.22	□□□□□ -0.77
NCOR1-223	ENST00000583226	PITPNM2	Q9BZ72	1349 aa		10.22	□□□□□ -0.77
NCOR1-223	ENST00000583226	RTL9	Q8NET4	1388 aa		10.22	□□□□□ -0.77
NCOR1-223	ENST00000583226	VIL1	P09327	827 aa	Known RBP	10.21	□□□□□ -0.77
NCOR1-223	ENST00000583226	ZNF280A	P59817	542 aa	Predicted RBP	10.21	□□□□□ -0.77
NCOR1-223	ENST00000583226	GRAP	Q13588	217 aa		10.21	□□□□□ -0.77
NCOR1-223	ENST00000583226	ANGEL2	Q5VTE6	544 aa	Known RBP	10.21	□□□□□ -0.77
NCOR1-223	ENST00000583226	MOB2	Q70IA6	237 aa		10.21	□□□□□ -0.77
NCOR1-223	ENST00000583226	DDX46	Q7L014	1031 aa	Known RBP	10.21	□□□□□ -0.77
NCOR1-223	ENST00000583226	FCHSD1	Q86WN1	690 aa		10.21	□□□□□ -0.77
NCOR1-223	ENST00000583226	GRAPL	Q8TC17	118 aa	Predicted RBP	10.21	□□□□□ -0.77
NCOR1-223	ENST00000583226	PBXIP1	Q96AQ6	731 aa		10.21	□□□□□ -0.77
NCOR1-223	ENST00000583226	PHACTR3	Q96KR7	559 aa		10.21	□□□□□ -0.77
NCOR1-223	ENST00000583226	UTP14A	Q9BVJ6	771 aa	Known RBP	10.21	□□□□□ -0.77
NCOR1-223	ENST00000583226	DBNDD1	Q9H9R9	158 aa		10.21	□□□□□ -0.77
NCOR1-223	ENST00000583226	KCNQ5	Q9NR82	932 aa		10.21	□□□□□ -0.77
NCOR1-223	ENST00000583226	KCNH4	Q9UQ05	1017 aa		10.21	□□□□□ -0.77
NCOR1-223	ENST00000583226	PTPN22	Q9Y2R2	807 aa		10.21	□□□□□ -0.77
NCOR1-223	ENST00000583226	UNC80	Q8N2C7	3258 aa		10.2	□□□□□ -0.78
NCOR1-223	ENST00000583226	ZNF609	O15014	1411 aa		10.2	□□□□□ -0.78
NCOR1-223	ENST00000583226	U2SURP	O15042	1029 aa	Known RBP	10.2	□□□□□ -0.78
NCOR1-223	ENST00000583226	ECE2	O60344	883 aa		10.2	□□□□□ -0.78
NCOR1-223	ENST00000583226	SPEM2	Q0P670	501 aa		10.2	□□□□□ -0.78
NCOR1-223	ENST00000583226	ANKRD36C	Q5JPF3	1778 aa		10.2	□□□□□ -0.78
NCOR1-223	ENST00000583226	KANK3	Q6NY19	840 aa		10.2	□□□□□ -0.78
NCOR1-223	ENST00000583226	CCDC82	Q8N4S0	544 aa		10.2	□□□□□ -0.78
NCOR1-223	ENST00000583226	KCTD17	Q8N5Z5	321 aa		10.2	□□□□□ -0.78
NCOR1-223	ENST00000583226	RTF1	Q92541	710 aa	Known RBP	10.2	□□□□□ -0.78
NCOR1-223	ENST00000583226	BTBD6	Q96KE9	485 aa		10.2	□□□□□ -0.78
NCOR1-223	ENST00000583226	LAMB4	A4D0S4	1761 aa		10.19	□□□□□ -0.78
NCOR1-223	ENST00000583226	LRRC37A	A6NMS7	1700 aa		10.19	□□□□□ -0.78
NCOR1-223	ENST00000583226	COL3A1	P02461	1466 aa	Predicted RBP	10.19	□□□□□ -0.78
NCOR1-223	ENST00000583226	ELOA	Q14241	798 aa	Known RBP	10.19	□□□□□ -0.78
NCOR1-223	ENST00000583226	MCM10	Q7L590	875 aa		10.19	□□□□□ -0.78
NCOR1-223	ENST00000583226	ERO1A	Q96HE7	468 aa		10.19	□□□□□ -0.78
NCOR1-223	ENST00000583226	AVEN	Q9NQS1	362 aa	Predicted RBP	10.19	□□□□□ -0.78
NCOR1-223	ENST00000583226	MKL2	Q9ULH7	1088 aa		10.19	□□□□□ -0.78
NCOR1-223	ENST00000583226	RRP7A	Q9Y3A4	280 aa	Known RBP	10.19	□□□□□ -0.78
NCOR1-223	ENST00000583226	ATG7	O95352	703 aa		10.18	□□□□□ -0.78
NCOR1-223	ENST00000583226	INHBE	P58166	350 aa		10.18	□□□□□ -0.78
NCOR1-223	ENST00000583226	FKBP5	Q13451	457 aa	Predicted RBP	10.18	□□□□□ -0.78
NCOR1-223	ENST00000583226	TAF7	Q15545	349 aa	Predicted RBP	10.18	□□□□□ -0.78
NCOR1-223	ENST00000583226	SWI5	Q1ZZU3	235 aa		10.18	□□□□□ -0.78
NCOR1-223	ENST00000583226	TMEM164	Q5U3C3	297 aa		10.18	□□□□□ -0.78
NCOR1-223	ENST00000583226	CHSY3	Q70JA7	882 aa		10.18	□□□□□ -0.78
NCOR1-223	ENST00000583226	AGBL3	Q8NEM8	1001 aa		10.18	□□□□□ -0.78
NCOR1-223	ENST00000583226	BHMT	Q93088	406 aa		10.18	□□□□□ -0.78
NCOR1-223	ENST00000583226	ZNF333	Q96JL9	665 aa		10.18	□□□□□ -0.78
NCOR1-223	ENST00000583226	POLL	Q9UGP5	575 aa		10.18	□□□□□ -0.78
NCOR1-223	ENST00000583226	LAMB2	P55268	1798 aa		10.17	□□□□□ -0.78
NCOR1-223	ENST00000583226	DDX60	Q8IY21	1712 aa	Known RBP	10.17	□□□□□ -0.78
NCOR1-223	ENST00000583226	HTATSF1	O43719	755 aa	Known RBP	10.17	□□□□□ -0.78
NCOR1-223	ENST00000583226	HCLS1	P14317	486 aa	Predicted RBP	10.17	□□□□□ -0.78
NCOR1-223	ENST00000583226	MYL6B	P14649	208 aa		10.17	□□□□□ -0.78
NCOR1-223	ENST00000583226	PRKAR2B	P31323	418 aa		10.17	□□□□□ -0.78
NCOR1-223	ENST00000583226	TBC1D8B	Q0IIM8	1120 aa		10.17	□□□□□ -0.78
NCOR1-223	ENST00000583226	TCIRG1	Q13488	830 aa		10.17	□□□□□ -0.78
NCOR1-223	ENST00000583226	EYA3	Q99504	573 aa		10.17	□□□□□ -0.78
NCOR1-223	ENST00000583226	MKNK1	Q9BUB5	465 aa		10.17	□□□□□ -0.78
NCOR1-223	ENST00000583226	IGFLR1	Q9H665	355 aa		10.17	□□□□□ -0.78
NCOR1-223	ENST00000583226	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	10.17	□□□□□ -0.78
NCOR1-223	ENST00000583226	SCN9A	Q15858	1988 aa		10.17	□□□□□ -0.78
NCOR1-223	ENST00000583226	MANSC4	A6NHS7	340 aa	Predicted RBP	10.16	□□□□□ -0.78
NCOR1-223	ENST00000583226	TGFBR3L	H3BV60	316 aa		10.16	□□□□□ -0.78
NCOR1-223	ENST00000583226	NF2	P35240	595 aa		10.16	□□□□□ -0.78
NCOR1-223	ENST00000583226	PTPN12	Q05209	780 aa	Known RBP	10.16	□□□□□ -0.78
NCOR1-223	ENST00000583226	GML	Q99445	158 aa		10.16	□□□□□ -0.78
NCOR1-223	ENST00000583226	PRO3102	Q9H379	93 aa		10.16	□□□□□ -0.78
NCOR1-223	ENST00000583226	EFCC1	Q9HA90	598 aa		10.16	□□□□□ -0.78
NCOR1-223	ENST00000583226	MYOZ2	Q9NPC6	264 aa		10.16	□□□□□ -0.78
NCOR1-223	ENST00000583226	ALAS2	P22557	587 aa		10.15	□□□□□ -0.78
NCOR1-223	ENST00000583226	GPSM2	P81274	684 aa		10.15	□□□□□ -0.78
NCOR1-223	ENST00000583226	LDLRAD1	Q5T700	205 aa		10.15	□□□□□ -0.78
NCOR1-223	ENST00000583226	PRAMEF18	Q5VWM3	479 aa		10.15	□□□□□ -0.78
NCOR1-223	ENST00000583226	ARMC9	Q7Z3E5	817 aa		10.15	□□□□□ -0.78
NCOR1-223	ENST00000583226	NBPF11	Q86T75	865 aa		10.15	□□□□□ -0.78
NCOR1-223	ENST00000583226	MIS18A	Q9NYP9	233 aa		10.15	□□□□□ -0.78
NCOR1-223	ENST00000583226	TIMELESS	Q9UNS1	1208 aa		10.15	□□□□□ -0.78
NCOR1-223	ENST00000583226	TTC28	Q96AY4	2481 aa		10.15	□□□□□ -0.78
NCOR1-223	ENST00000583226	TAF1	P21675	1872 aa		10.15	□□□□□ -0.79
NCOR1-223	ENST00000583226	VCAN	P13611	3396 aa		10.14	□□□□□ -0.79
NCOR1-223	ENST00000583226	SH3TC1	Q8TE82	1336 aa		10.14	□□□□□ -0.79
NCOR1-223	ENST00000583226	ELOA3C	A0A087WX78	387 aa	Predicted RBP	10.14	□□□□□ -0.79
NCOR1-223	ENST00000583226	ELOA3D	A6NLF2	546 aa	Predicted RBP	10.14	□□□□□ -0.79
NCOR1-223	ENST00000583226	IDH3A	P50213	366 aa		10.14	□□□□□ -0.79
NCOR1-223	ENST00000583226	DCTN1	Q14203	1278 aa		10.14	□□□□□ -0.79
NCOR1-223	ENST00000583226	ELOA3B	Q3SY89	546 aa		10.14	□□□□□ -0.79
NCOR1-223	ENST00000583226	LRP10	Q7Z4F1	713 aa		10.14	□□□□□ -0.79
NCOR1-223	ENST00000583226	NLRP10	Q86W26	655 aa		10.14	□□□□□ -0.79
NCOR1-223	ENST00000583226	ELOA3	Q8NG57	546 aa		10.14	□□□□□ -0.79
NCOR1-223	ENST00000583226	TBC1D16	Q8TBP0	767 aa		10.14	□□□□□ -0.79
NCOR1-223	ENST00000583226	CD99L2	Q8TCZ2	262 aa		10.14	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms