RNA–Protein interactions for RNA: ENST00000583173.5

TSEN54-208, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-208ENST00000583173 VCAM1P19320 739 aa25.55■■□□□ 1.68
TSEN54-208ENST00000583173 CTCFP49711 727 aaPredicted RBP25.55■■□□□ 1.68
TSEN54-208ENST00000583173 TAF1CQ15572 869 aaPredicted RBP25.55■■□□□ 1.68
TSEN54-208ENST00000583173 CATSPERGQ6ZRH7 1159 aa25.55■■□□□ 1.68
TSEN54-208ENST00000583173 TTC14Q96N46 770 aa25.55■■□□□ 1.68
TSEN54-208ENST00000583173 USP26Q9BXU7 913 aa25.55■■□□□ 1.68
TSEN54-208ENST00000583173 SH2D4AQ9H788 454 aa25.55■■□□□ 1.68
TSEN54-208ENST00000583173 ZFYVE28Q9HCC9 887 aa25.55■■□□□ 1.68
TSEN54-208ENST00000583173 TLR2O60603 784 aa25.54■■□□□ 1.68
TSEN54-208ENST00000583173 REC8O95072 547 aa25.54■■□□□ 1.68
TSEN54-208ENST00000583173 CYP2C8P10632 490 aa25.54■■□□□ 1.68
TSEN54-208ENST00000583173 ATP2B2Q01814 1243 aa25.54■■□□□ 1.68
TSEN54-208ENST00000583173 PPP4R3BQ5MIZ7 849 aa25.54■■□□□ 1.68
TSEN54-208ENST00000583173 CYB5R4Q7L1T6 521 aa25.54■■□□□ 1.68
TSEN54-208ENST00000583173 RASEFQ8IZ41 740 aa25.54■■□□□ 1.68
TSEN54-208ENST00000583173 LPAR1Q92633 364 aa25.54■■□□□ 1.68
TSEN54-208ENST00000583173 ASCC2Q9H1I8 757 aaPredicted RBP25.54■■□□□ 1.68
TSEN54-208ENST00000583173 LOC285556D6RIA3 1793 aa25.54■■□□□ 1.68
TSEN54-208ENST00000583173 F5H6K3 240 aa25.53■■□□□ 1.68
TSEN54-208ENST00000583173 HSPA4P34932 840 aa25.53■■□□□ 1.68
TSEN54-208ENST00000583173 KLRC3Q07444 240 aa25.53■■□□□ 1.68
TSEN54-208ENST00000583173 POTEEQ6S8J3 1075 aa25.53■■□□□ 1.68
TSEN54-208ENST00000583173 C17orf99Q6UX52 265 aa25.53■■□□□ 1.68
TSEN54-208ENST00000583173 P2RX7Q99572 595 aaKnown RBP25.53■■□□□ 1.68
TSEN54-208ENST00000583173 USP17L15C9J2P7 530 aa25.52■■□□□ 1.68
TSEN54-208ENST00000583173 USP17L13C9JLJ4 530 aa25.52■■□□□ 1.68
TSEN54-208ENST00000583173 USP17L11C9JVI0 530 aa25.52■■□□□ 1.68
TSEN54-208ENST00000583173 USP17L18D6R9N7 530 aa25.52■■□□□ 1.68
TSEN54-208ENST00000583173 USP17L22D6RA61 530 aa25.52■■□□□ 1.68
TSEN54-208ENST00000583173 USP17L17D6RBQ6 530 aa25.52■■□□□ 1.68
TSEN54-208ENST00000583173 USP17L19D6RCP7 530 aa25.52■■□□□ 1.68
TSEN54-208ENST00000583173 USP17L20D6RJB6 530 aa25.52■■□□□ 1.68
TSEN54-208ENST00000583173 GPR25O00155 361 aa25.52■■□□□ 1.68
TSEN54-208ENST00000583173 USP17L24Q0WX57 530 aa25.52■■□□□ 1.68
TSEN54-208ENST00000583173 PABPC4Q13310 644 aaKnown RBP eCLIP25.52■■□□□ 1.68
TSEN54-208ENST00000583173 COL9A3Q14050 684 aaPredicted RBP25.52■■□□□ 1.68
TSEN54-208ENST00000583173 DGKHQ86XP1 1220 aa25.52■■□□□ 1.68
TSEN54-208ENST00000583173 MB21D2Q8IYB1 491 aaPredicted RBP25.52■■□□□ 1.68
TSEN54-208ENST00000583173 GMCL1P1Q8NEA9 526 aa25.52■■□□□ 1.68
TSEN54-208ENST00000583173 OSBPP22059 807 aa25.51■■□□□ 1.67
TSEN54-208ENST00000583173 LBX1P52954 281 aa25.51■■□□□ 1.67
TSEN54-208ENST00000583173 NCOA7Q8NI08 942 aa25.51■■□□□ 1.67
TSEN54-208ENST00000583173 PARK7Q99497 189 aaKnown RBP25.51■■□□□ 1.67
TSEN54-208ENST00000583173 TMEM47Q9BQJ4 181 aa25.51■■□□□ 1.67
TSEN54-208ENST00000583173 ZKSCAN3Q9BRR0 538 aa25.51■■□□□ 1.67
TSEN54-208ENST00000583173 RPAP3Q9H6T3 665 aaPredicted RBP25.51■■□□□ 1.67
TSEN54-208ENST00000583173 GOPCQ9HD26 462 aa25.51■■□□□ 1.67
TSEN54-208ENST00000583173 NDUFB10O96000 172 aa25.5■■□□□ 1.67
TSEN54-208ENST00000583173 BCRP11274 1271 aa25.5■■□□□ 1.67
TSEN54-208ENST00000583173 SEC23AQ15436 765 aa25.5■■□□□ 1.67
TSEN54-208ENST00000583173 CCDC178Q5BJE1 867 aa25.5■■□□□ 1.67
TSEN54-208ENST00000583173 SPICE1Q8N0Z3 855 aa25.5■■□□□ 1.67
TSEN54-208ENST00000583173 ZSCAN10Q96SZ4 725 aaPredicted RBP25.5■■□□□ 1.67
TSEN54-208ENST00000583173 STX8Q9UNK0 236 aa25.5■■□□□ 1.67
TSEN54-208ENST00000583173 WDR46O15213 610 aaKnown RBP25.49■■□□□ 1.67
TSEN54-208ENST00000583173 TOP1P11387 765 aaKnown RBP25.49■■□□□ 1.67
TSEN54-208ENST00000583173 ANTXR2P58335 489 aa25.49■■□□□ 1.67
TSEN54-208ENST00000583173 TRDNQ13061 729 aa25.49■■□□□ 1.67
TSEN54-208ENST00000583173 C8orf34Q49A92 452 aa25.49■■□□□ 1.67
TSEN54-208ENST00000583173 RNF20Q5VTR2 975 aa25.49■■□□□ 1.67
TSEN54-208ENST00000583173 LRRC47Q8N1G4 583 aaKnown RBP25.49■■□□□ 1.67
TSEN54-208ENST00000583173 PNMA3Q9UL41 463 aa25.49■■□□□ 1.67
TSEN54-208ENST00000583173 SEC24BO95487 1268 aa25.48■■□□□ 1.67
TSEN54-208ENST00000583173 IQCA1Q86XH1 822 aa25.48■■□□□ 1.67
TSEN54-208ENST00000583173 ENAHQ8N8S7 591 aaPredicted RBP25.48■■□□□ 1.67
TSEN54-208ENST00000583173 PRDM10Q9NQV6 1147 aa25.48■■□□□ 1.67
TSEN54-208ENST00000583173 ADCK5Q3MIX3 580 aa25.47■■□□□ 1.67
TSEN54-208ENST00000583173 SLFN13Q68D06 897 aa25.47■■□□□ 1.67
TSEN54-208ENST00000583173 LBX2Q6XYB7 198 aa25.47■■□□□ 1.67
TSEN54-208ENST00000583173 IGDCC4Q8TDY8 1250 aa25.47■■□□□ 1.67
TSEN54-208ENST00000583173 ZNF296Q8WUU4 475 aaPredicted RBP25.47■■□□□ 1.67
TSEN54-208ENST00000583173 CPA4Q9UI42 421 aa25.47■■□□□ 1.67
TSEN54-208ENST00000583173 HERVK_113P62684 666 aa25.46■■□□□ 1.67
TSEN54-208ENST00000583173 COG2Q14746 738 aa25.46■■□□□ 1.67
TSEN54-208ENST00000583173 GMCL1Q96IK5 515 aa25.46■■□□□ 1.67
TSEN54-208ENST00000583173 RBPJLQ9UBG7 517 aa25.46■■□□□ 1.67
TSEN54-208ENST00000583173 ADAMTS5Q9UNA0 930 aa25.46■■□□□ 1.67
TSEN54-208ENST00000583173 SNX14Q9Y5W7 946 aa25.46■■□□□ 1.67
TSEN54-208ENST00000583173 GCLCP48506 637 aaPredicted RBP25.45■■□□□ 1.66
TSEN54-208ENST00000583173 IRX3P78415 501 aaPredicted RBP25.45■■□□□ 1.66
TSEN54-208ENST00000583173 CAP1Q01518 475 aa25.45■■□□□ 1.66
TSEN54-208ENST00000583173 EXOSC10Q01780 885 aaKnown RBP25.45■■□□□ 1.66
TSEN54-208ENST00000583173 FAM83BQ5T0W9 1011 aa25.45■■□□□ 1.66
TSEN54-208ENST00000583173 RALYLQ86SE5 291 aaKnown RBP25.45■■□□□ 1.66
TSEN54-208ENST00000583173 NUP88Q99567 741 aaPredicted RBP25.45■■□□□ 1.66
TSEN54-208ENST00000583173 MTA3Q9BTC8 594 aa25.45■■□□□ 1.66
TSEN54-208ENST00000583173 HOXC10Q9NYD6 342 aa25.45■■□□□ 1.66
TSEN54-208ENST00000583173 TNKSO95271 1327 aa25.44■■□□□ 1.66
TSEN54-208ENST00000583173 SPDYE16A6NNV3 312 aaPredicted RBP25.44■■□□□ 1.66
TSEN54-208ENST00000583173 FKTNO75072 461 aa25.44■■□□□ 1.66
TSEN54-208ENST00000583173 SNHG28P0DPA3 235 aa25.44■■□□□ 1.66
TSEN54-208ENST00000583173 DSG3P32926 999 aa25.44■■□□□ 1.66
TSEN54-208ENST00000583173 SP3Q02447 781 aa25.44■■□□□ 1.66
TSEN54-208ENST00000583173 CHST3Q7LGC8 479 aa25.44■■□□□ 1.66
TSEN54-208ENST00000583173 NEK1Q96PY6 1258 aa25.44■■□□□ 1.66
TSEN54-208ENST00000583173 TXNRD2Q9NNW7 524 aa25.44■■□□□ 1.66
TSEN54-208ENST00000583173 MORF4L1Q9UBU8 362 aa25.44■■□□□ 1.66
TSEN54-208ENST00000583173 CNMDO75829 334 aa25.43■■□□□ 1.66
TSEN54-208ENST00000583173 ZKSCAN1P17029 563 aaPredicted RBP25.43■■□□□ 1.66
TSEN54-208ENST00000583173 MCCP23508 829 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms