RNA–Protein interactions for RNA: ENST00000582923.1

PDLIM1P2-201, Transcript of PDZ and LIM domain 1 pseudogene 2, humanhuman

BASIC

Gene PDLIM1P2, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P2-201ENST00000582923 SPP2Q13103 211 aa10.64□□□□□ -0.71
PDLIM1P2-201ENST00000582923 PPIL2Q13356 520 aa10.64□□□□□ -0.71
PDLIM1P2-201ENST00000582923 MTMR2Q13614 643 aa10.64□□□□□ -0.71
PDLIM1P2-201ENST00000582923 CCDC96Q2M329 555 aa10.64□□□□□ -0.71
PDLIM1P2-201ENST00000582923 PAXIP1Q6ZW49 1069 aaPredicted RBP10.64□□□□□ -0.71
PDLIM1P2-201ENST00000582923 SGMS1Q86VZ5 419 aa10.64□□□□□ -0.71
PDLIM1P2-201ENST00000582923 RAB11FIP4Q86YS3 637 aa10.64□□□□□ -0.71
PDLIM1P2-201ENST00000582923 HSCBQ8IWL3 235 aa10.64□□□□□ -0.71
PDLIM1P2-201ENST00000582923 ZNF280CQ8ND82 737 aa10.64□□□□□ -0.71
PDLIM1P2-201ENST00000582923 ACER1Q8TDN7 264 aa10.64□□□□□ -0.71
PDLIM1P2-201ENST00000582923 NUP133Q8WUM0 1156 aa10.64□□□□□ -0.71
PDLIM1P2-201ENST00000582923 ANKS1AQ92625 1134 aa10.64□□□□□ -0.71
PDLIM1P2-201ENST00000582923 CHMP4CQ96CF2 233 aa10.64□□□□□ -0.71
PDLIM1P2-201ENST00000582923 OPTNQ96CV9 577 aa10.64□□□□□ -0.71
PDLIM1P2-201ENST00000582923 LARP6Q9BRS8 491 aaKnown RBP10.64□□□□□ -0.71
PDLIM1P2-201ENST00000582923 MYL10Q9BUA6 226 aa10.64□□□□□ -0.71
PDLIM1P2-201ENST00000582923 WDR18Q9BV38 432 aa10.64□□□□□ -0.71
PDLIM1P2-201ENST00000582923 ALDH8A1Q9H2A2 487 aaPredicted RBP10.64□□□□□ -0.71
PDLIM1P2-201ENST00000582923 A0A1W2PRG0 241 aa10.63□□□□□ -0.71
PDLIM1P2-201ENST00000582923 GOLGA8AA7E2F4 631 aa10.63□□□□□ -0.71
PDLIM1P2-201ENST00000582923 USP17L10C9JJH3 530 aa10.63□□□□□ -0.71
PDLIM1P2-201ENST00000582923 CALM1P0DP23 149 aa10.63□□□□□ -0.71
PDLIM1P2-201ENST00000582923 CALM2P0DP24 149 aa10.63□□□□□ -0.71
PDLIM1P2-201ENST00000582923 CALM3P0DP25 149 aa10.63□□□□□ -0.71
PDLIM1P2-201ENST00000582923 MCM2P49736 904 aa10.63□□□□□ -0.71
PDLIM1P2-201ENST00000582923 ZNF157P51786 506 aaPredicted RBP10.63□□□□□ -0.71
PDLIM1P2-201ENST00000582923 USP14P54578 494 aa10.63□□□□□ -0.71
PDLIM1P2-201ENST00000582923 PPATQ06203 517 aa10.63□□□□□ -0.71
PDLIM1P2-201ENST00000582923 STK3Q13188 491 aa10.63□□□□□ -0.71
PDLIM1P2-201ENST00000582923 APOA5Q6Q788 366 aa10.63□□□□□ -0.71
PDLIM1P2-201ENST00000582923 SAPCD2Q86UD0 394 aa10.63□□□□□ -0.71
PDLIM1P2-201ENST00000582923 CCDC144CPQ8IYA2 1237 aa10.63□□□□□ -0.71
PDLIM1P2-201ENST00000582923 FBXL16Q8N461 479 aa10.63□□□□□ -0.71
PDLIM1P2-201ENST00000582923 CTCFLQ8NI51 663 aaPredicted RBP10.63□□□□□ -0.71
PDLIM1P2-201ENST00000582923 WNK4Q96J92 1243 aa10.63□□□□□ -0.71
PDLIM1P2-201ENST00000582923 AGXT2Q9BYV1 514 aa10.63□□□□□ -0.71
PDLIM1P2-201ENST00000582923 VCPKMTQ9H867 229 aa10.63□□□□□ -0.71
PDLIM1P2-201ENST00000582923 TMOD4Q9NZQ9 345 aa10.63□□□□□ -0.71
PDLIM1P2-201ENST00000582923 BRPF3Q9ULD4 1205 aa10.63□□□□□ -0.71
PDLIM1P2-201ENST00000582923 SYNPO2Q9UMS6 1093 aa10.63□□□□□ -0.71
PDLIM1P2-201ENST00000582923 LIMCH1Q9UPQ0 1083 aa10.63□□□□□ -0.71
PDLIM1P2-201ENST00000582923 TMX2Q9Y320 296 aa10.63□□□□□ -0.71
PDLIM1P2-201ENST00000582923 TLL2Q9Y6L7 1015 aa10.63□□□□□ -0.71
PDLIM1P2-201ENST00000582923 LOC285556D6RIA3 1793 aa10.62□□□□□ -0.71
PDLIM1P2-201ENST00000582923 CD2BP2O95400 341 aaKnown RBP10.62□□□□□ -0.71
PDLIM1P2-201ENST00000582923 NDUFB10O96000 172 aa10.62□□□□□ -0.71
PDLIM1P2-201ENST00000582923 ATXN8OSP0DMR3 200 aa10.62□□□□□ -0.71
PDLIM1P2-201ENST00000582923 RXRAP19793 462 aa10.62□□□□□ -0.71
PDLIM1P2-201ENST00000582923 NOVP48745 357 aa10.62□□□□□ -0.71
PDLIM1P2-201ENST00000582923 METAP2P50579 478 aaKnown RBP eCLIP10.62□□□□□ -0.71
PDLIM1P2-201ENST00000582923 APLP1P51693 650 aa10.62□□□□□ -0.71
PDLIM1P2-201ENST00000582923 HMGCS2P54868 508 aa10.62□□□□□ -0.71
PDLIM1P2-201ENST00000582923 MKRN3Q13064 507 aaKnown RBP10.62□□□□□ -0.71
PDLIM1P2-201ENST00000582923 SLFN13Q68D06 897 aa10.62□□□□□ -0.71
PDLIM1P2-201ENST00000582923 RGMBQ6NW40 437 aa10.62□□□□□ -0.71
PDLIM1P2-201ENST00000582923 USP17L2Q6R6M4 530 aa10.62□□□□□ -0.71
PDLIM1P2-201ENST00000582923 RASGRP2Q7LDG7 609 aa10.62□□□□□ -0.71
PDLIM1P2-201ENST00000582923 SIAH1Q8IUQ4 282 aa10.62□□□□□ -0.71
PDLIM1P2-201ENST00000582923 SPICE1Q8N0Z3 855 aa10.62□□□□□ -0.71
PDLIM1P2-201ENST00000582923 GMCL1P1Q8NEA9 526 aa10.62□□□□□ -0.71
PDLIM1P2-201ENST00000582923 MKL1Q969V6 931 aa10.62□□□□□ -0.71
PDLIM1P2-201ENST00000582923 ZSCAN31Q96LW9 406 aaPredicted RBP10.62□□□□□ -0.71
PDLIM1P2-201ENST00000582923 KIAA1683Q9H0B3 1180 aa10.62□□□□□ -0.71
PDLIM1P2-201ENST00000582923 SLKQ9H2G2 1235 aaPredicted RBP10.62□□□□□ -0.71
PDLIM1P2-201ENST00000582923 TPCN1Q9ULQ1 816 aa10.62□□□□□ -0.71
PDLIM1P2-201ENST00000582923 AFG3L2Q9Y4W6 797 aa10.62□□□□□ -0.71
PDLIM1P2-201ENST00000582923 PTPRFP10586 1907 aa10.61□□□□□ -0.71
PDLIM1P2-201ENST00000582923 C19orf81C9J6K1 198 aa10.61□□□□□ -0.71
PDLIM1P2-201ENST00000582923 F5H6K3 240 aa10.61□□□□□ -0.71
PDLIM1P2-201ENST00000582923 IRF6O14896 467 aa10.61□□□□□ -0.71
PDLIM1P2-201ENST00000582923 LARGE1O95461 756 aa10.61□□□□□ -0.71
PDLIM1P2-201ENST00000582923 PARP1P09874 1014 aaKnown RBP10.61□□□□□ -0.71
PDLIM1P2-201ENST00000582923 ZBTB48P10074 688 aaPredicted RBP10.61□□□□□ -0.71
PDLIM1P2-201ENST00000582923 KIF5BP33176 963 aa10.61□□□□□ -0.71
PDLIM1P2-201ENST00000582923 SLC1A4P43007 532 aa10.61□□□□□ -0.71
PDLIM1P2-201ENST00000582923 RCAN1P53805 252 aa10.61□□□□□ -0.71
PDLIM1P2-201ENST00000582923 BACE1P56817 501 aa10.61□□□□□ -0.71
PDLIM1P2-201ENST00000582923 KLRC3Q07444 240 aa10.61□□□□□ -0.71
PDLIM1P2-201ENST00000582923 IKQ13123 557 aaPredicted RBP10.61□□□□□ -0.71
PDLIM1P2-201ENST00000582923 GRM1Q13255 1194 aa10.61□□□□□ -0.71
PDLIM1P2-201ENST00000582923 SNAPC2Q13487 334 aa10.61□□□□□ -0.71
PDLIM1P2-201ENST00000582923 BECN1Q14457 450 aa10.61□□□□□ -0.71
PDLIM1P2-201ENST00000582923 GRM4Q14833 912 aa10.61□□□□□ -0.71
PDLIM1P2-201ENST00000582923 RTN1Q16799 776 aa10.61□□□□□ -0.71
PDLIM1P2-201ENST00000582923 GADL1Q6ZQY3 521 aa10.61□□□□□ -0.71
PDLIM1P2-201ENST00000582923 RASAL3Q86YV0 1011 aa10.61□□□□□ -0.71
PDLIM1P2-201ENST00000582923 DCAF4Q8WV16 495 aa10.61□□□□□ -0.71
PDLIM1P2-201ENST00000582923 LPAR1Q92633 364 aa10.61□□□□□ -0.71
PDLIM1P2-201ENST00000582923 ZNF274Q96GC6 653 aaPredicted RBP10.61□□□□□ -0.71
PDLIM1P2-201ENST00000582923 NUP88Q99567 741 aaPredicted RBP10.61□□□□□ -0.71
PDLIM1P2-201ENST00000582923 TANGO6Q9C0B7 1094 aa10.61□□□□□ -0.71
PDLIM1P2-201ENST00000582923 SH2B1Q9NRF2 756 aaPredicted RBP10.61□□□□□ -0.71
PDLIM1P2-201ENST00000582923 CREBZFQ9NS37 354 aa10.61□□□□□ -0.71
PDLIM1P2-201ENST00000582923 KCNH4Q9UQ05 1017 aa10.61□□□□□ -0.71
PDLIM1P2-201ENST00000582923 FRMPD2Q68DX3 1309 aaPredicted RBP10.6□□□□□ -0.71
PDLIM1P2-201ENST00000582923 K7ELQ4 463 aaPredicted RBP10.6□□□□□ -0.71
PDLIM1P2-201ENST00000582923 CXCL11O14625 94 aa10.6□□□□□ -0.71
PDLIM1P2-201ENST00000582923 WDR46O15213 610 aaKnown RBP10.6□□□□□ -0.71
PDLIM1P2-201ENST00000582923 SLC10A3P09131 477 aa10.6□□□□□ -0.71
PDLIM1P2-201ENST00000582923 PDHBP11177 359 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms