RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	TREML2	Q5T2D2	321 aa		6.67	□□□□□ -1.34
MSI2-216	ENST00000582772	ZC3H14	Q6PJT7	736 aa	Known RBP	6.67	□□□□□ -1.34
MSI2-216	ENST00000582772	DZIP1L	Q8IYY4	767 aa	Known RBP	6.67	□□□□□ -1.34
MSI2-216	ENST00000582772	MRPL38	Q96DV4	380 aa	Known RBP	6.67	□□□□□ -1.34
MSI2-216	ENST00000582772	BBC3	Q96PG8	261 aa	Predicted RBP	6.67	□□□□□ -1.34
MSI2-216	ENST00000582772	CTNNA3	Q9UI47	895 aa		6.67	□□□□□ -1.34
MSI2-216	ENST00000582772	ZFHX3	Q15911	3703 aa		6.67	□□□□□ -1.34
MSI2-216	ENST00000582772	DIAPH1	O60610	1272 aa	Known RBP	6.66	□□□□□ -1.34
MSI2-216	ENST00000582772	EYA4	O95677	639 aa		6.66	□□□□□ -1.34
MSI2-216	ENST00000582772	PTPRA	P18433	802 aa		6.66	□□□□□ -1.34
MSI2-216	ENST00000582772	CCR10	P46092	362 aa		6.66	□□□□□ -1.34
MSI2-216	ENST00000582772	CCT4	P50991	539 aa	Known RBP	6.66	□□□□□ -1.34
MSI2-216	ENST00000582772	RBM5	P52756	815 aa	Known RBP eCLIP	6.66	□□□□□ -1.34
MSI2-216	ENST00000582772	ERVK-21	P61565	698 aa		6.66	□□□□□ -1.34
MSI2-216	ENST00000582772	ZNF200	P98182	395 aa	Predicted RBP	6.66	□□□□□ -1.34
MSI2-216	ENST00000582772	FAM47A	Q5JRC9	791 aa		6.66	□□□□□ -1.34
MSI2-216	ENST00000582772	HERC6	Q8IVU3	1022 aa		6.66	□□□□□ -1.34
MSI2-216	ENST00000582772	DDX1	Q92499	740 aa	Known RBP	6.66	□□□□□ -1.34
MSI2-216	ENST00000582772	EDC3	Q96F86	508 aa	Known RBP	6.66	□□□□□ -1.34
MSI2-216	ENST00000582772	BORCS6	Q96GS4	357 aa		6.66	□□□□□ -1.34
MSI2-216	ENST00000582772	TSEN34	Q9BSV6	310 aa	Known RBP	6.66	□□□□□ -1.34
MSI2-216	ENST00000582772	SEC31B	Q9NQW1	1179 aa		6.66	□□□□□ -1.34
MSI2-216	ENST00000582772	ZHX2	Q9Y6X8	837 aa		6.66	□□□□□ -1.34
MSI2-216	ENST00000582772	TANC1	Q9C0D5	1861 aa		6.66	□□□□□ -1.34
MSI2-216	ENST00000582772	MYH3	P11055	1940 aa		6.66	□□□□□ -1.34
MSI2-216	ENST00000582772	KIF28P	B7ZC32	967 aa		6.65	□□□□□ -1.34
MSI2-216	ENST00000582772	TGM1	P22735	817 aa		6.65	□□□□□ -1.34
MSI2-216	ENST00000582772	CYP2C18	P33260	490 aa		6.65	□□□□□ -1.34
MSI2-216	ENST00000582772	CYP2C19	P33261	490 aa		6.65	□□□□□ -1.34
MSI2-216	ENST00000582772	C19orf57	Q0VDD7	668 aa		6.65	□□□□□ -1.34
MSI2-216	ENST00000582772	PABPC4	Q13310	644 aa	Known RBP eCLIP	6.65	□□□□□ -1.34
MSI2-216	ENST00000582772	OLFML2B	Q68BL8	750 aa		6.65	□□□□□ -1.34
MSI2-216	ENST00000582772	PLEKHH3	Q7Z736	793 aa		6.65	□□□□□ -1.34
MSI2-216	ENST00000582772	RNF180	Q86T96	592 aa		6.65	□□□□□ -1.34
MSI2-216	ENST00000582772	PDZD3	Q86UT5	571 aa		6.65	□□□□□ -1.34
MSI2-216	ENST00000582772	FAM126B	Q8IXS8	530 aa		6.65	□□□□□ -1.34
MSI2-216	ENST00000582772	RPUSD2	Q8IZ73	545 aa	Known RBP	6.65	□□□□□ -1.34
MSI2-216	ENST00000582772	SCYL3	Q8IZE3	742 aa		6.65	□□□□□ -1.34
MSI2-216	ENST00000582772	NETO1	Q8TDF5	533 aa		6.65	□□□□□ -1.34
MSI2-216	ENST00000582772	NUP133	Q8WUM0	1156 aa		6.65	□□□□□ -1.34
MSI2-216	ENST00000582772	LSM14B	Q9BX40	385 aa	Known RBP	6.65	□□□□□ -1.34
MSI2-216	ENST00000582772	PPP1R12C	Q9BZL4	782 aa		6.65	□□□□□ -1.34
MSI2-216	ENST00000582772	ASCC2	Q9H1I8	757 aa	Predicted RBP	6.65	□□□□□ -1.34
MSI2-216	ENST00000582772	STARD7	Q9NQZ5	370 aa		6.65	□□□□□ -1.34
MSI2-216	ENST00000582772	LEMD3	Q9Y2U8	911 aa		6.65	□□□□□ -1.34
MSI2-216	ENST00000582772	SCN5A	Q14524	2016 aa		6.64	□□□□□ -1.35
MSI2-216	ENST00000582772	MOXD2P	A6NHM9	499 aa		6.64	□□□□□ -1.35
MSI2-216	ENST00000582772	ZBBX	A8MT70	800 aa		6.64	□□□□□ -1.35
MSI2-216	ENST00000582772		F8W031	263 aa	Predicted RBP	6.64	□□□□□ -1.35
MSI2-216	ENST00000582772	CD4	P01730	458 aa		6.64	□□□□□ -1.35
MSI2-216	ENST00000582772	KRTAP21-3	Q3LHN1	58 aa		6.64	□□□□□ -1.35
MSI2-216	ENST00000582772	UBALD2	Q8IYN6	164 aa		6.64	□□□□□ -1.35
MSI2-216	ENST00000582772	GPRC5A	Q8NFJ5	357 aa		6.64	□□□□□ -1.35
MSI2-216	ENST00000582772	GAS2L2	Q8NHY3	880 aa		6.64	□□□□□ -1.35
MSI2-216	ENST00000582772	L3MBTL2	Q969R5	705 aa		6.64	□□□□□ -1.35
MSI2-216	ENST00000582772	PORCN	Q9H237	461 aa		6.64	□□□□□ -1.35
MSI2-216	ENST00000582772	CD209	Q9NNX6	404 aa		6.64	□□□□□ -1.35
MSI2-216	ENST00000582772	KCNK4	Q9NYG8	393 aa		6.64	□□□□□ -1.35
MSI2-216	ENST00000582772	RAI2	Q9Y5P3	530 aa		6.64	□□□□□ -1.35
MSI2-216	ENST00000582772		R4GN57	208 aa		6.64	□□□□□ -1.35
MSI2-216	ENST00000582772	ELP1	O95163	1332 aa		6.64	□□□□□ -1.35
MSI2-216	ENST00000582772	ATAD5	Q96QE3	1844 aa		6.64	□□□□□ -1.35
MSI2-216	ENST00000582772	SLC15A5	A6NIM6	579 aa		6.63	□□□□□ -1.35
MSI2-216	ENST00000582772	MYL6B	P14649	208 aa		6.63	□□□□□ -1.35
MSI2-216	ENST00000582772	IL1R1	P14778	569 aa		6.63	□□□□□ -1.35
MSI2-216	ENST00000582772	AOC1	P19801	751 aa		6.63	□□□□□ -1.35
MSI2-216	ENST00000582772	ATP2B2	Q01814	1243 aa		6.63	□□□□□ -1.35
MSI2-216	ENST00000582772	PTPRO	Q16827	1216 aa		6.63	□□□□□ -1.35
MSI2-216	ENST00000582772	PROSER3	Q2NL68	480 aa		6.63	□□□□□ -1.35
MSI2-216	ENST00000582772	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	6.63	□□□□□ -1.35
MSI2-216	ENST00000582772	CWF19L1	Q69YN2	538 aa	Known RBP	6.63	□□□□□ -1.35
MSI2-216	ENST00000582772	MIGA2	Q7L4E1	593 aa		6.63	□□□□□ -1.35
MSI2-216	ENST00000582772	RPAIN	Q86UA6	219 aa		6.63	□□□□□ -1.35
MSI2-216	ENST00000582772	NLRC5	Q86WI3	1866 aa		6.63	□□□□□ -1.35
MSI2-216	ENST00000582772	BANK1	Q8NDB2	785 aa		6.63	□□□□□ -1.35
MSI2-216	ENST00000582772	TGS1	Q96RS0	853 aa	Known RBP	6.63	□□□□□ -1.35
MSI2-216	ENST00000582772	CARD11	Q9BXL7	1154 aa		6.63	□□□□□ -1.35
MSI2-216	ENST00000582772	TXNRD2	Q9NNW7	524 aa		6.63	□□□□□ -1.35
MSI2-216	ENST00000582772	XPNPEP3	Q9NQH7	507 aa		6.63	□□□□□ -1.35
MSI2-216	ENST00000582772	CLDND1	Q9NY35	253 aa		6.63	□□□□□ -1.35
MSI2-216	ENST00000582772	RRP7A	Q9Y3A4	280 aa	Known RBP	6.63	□□□□□ -1.35
MSI2-216	ENST00000582772	MYO7A	Q13402	2215 aa		6.62	□□□□□ -1.35
MSI2-216	ENST00000582772	LCHN	A4D1U4	455 aa		6.62	□□□□□ -1.35
MSI2-216	ENST00000582772	EIF4E1B	A6NMX2	242 aa	Known RBP	6.62	□□□□□ -1.35
MSI2-216	ENST00000582772	PHF20L1	A8MW92	1017 aa		6.62	□□□□□ -1.35
MSI2-216	ENST00000582772	ADAMTS4	O75173	837 aa		6.62	□□□□□ -1.35
MSI2-216	ENST00000582772	ACLY	P53396	1101 aa		6.62	□□□□□ -1.35
MSI2-216	ENST00000582772	ERVK-9	P63128	1117 aa		6.62	□□□□□ -1.35
MSI2-216	ENST00000582772	ERVK-24	P63145	666 aa		6.62	□□□□□ -1.35
MSI2-216	ENST00000582772	MKRN4P	Q13434	485 aa	Predicted RBP	6.62	□□□□□ -1.35
MSI2-216	ENST00000582772	GRB14	Q14449	540 aa		6.62	□□□□□ -1.35
MSI2-216	ENST00000582772	TTLL4	Q14679	1199 aa		6.62	□□□□□ -1.35
MSI2-216	ENST00000582772	TCEAL5	Q5H9L2	206 aa		6.62	□□□□□ -1.35
MSI2-216	ENST00000582772	VARS2	Q5ST30	1063 aa	Known RBP	6.62	□□□□□ -1.35
MSI2-216	ENST00000582772	ANO1	Q5XXA6	986 aa		6.62	□□□□□ -1.35
MSI2-216	ENST00000582772	CCSAP	Q6IQ19	270 aa	Predicted RBP	6.62	□□□□□ -1.35
MSI2-216	ENST00000582772	C15orf52	Q6ZUT6	534 aa	Known RBP	6.62	□□□□□ -1.35
MSI2-216	ENST00000582772	DTWD2	Q8NBA8	298 aa		6.62	□□□□□ -1.35
MSI2-216	ENST00000582772	GATA6	Q92908	595 aa		6.62	□□□□□ -1.35
MSI2-216	ENST00000582772	WNT8A	Q9H1J5	351 aa		6.62	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms