RNA–Protein interactions for RNA: ENST00000581709.1

RTTN-208, Transcript of rotatin, humanhuman

TSL 3

Gene RTTN, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-208ENST00000581709 USP17L11C9JVI0 530 aa10.5□□□□□ -0.73
RTTN-208ENST00000581709 USP17L18D6R9N7 530 aa10.5□□□□□ -0.73
RTTN-208ENST00000581709 USP17L22D6RA61 530 aa10.5□□□□□ -0.73
RTTN-208ENST00000581709 USP17L17D6RBQ6 530 aa10.5□□□□□ -0.73
RTTN-208ENST00000581709 USP17L19D6RCP7 530 aa10.5□□□□□ -0.73
RTTN-208ENST00000581709 USP17L20D6RJB6 530 aa10.5□□□□□ -0.73
RTTN-208ENST00000581709 IFIT3O14879 490 aaKnown RBP10.5□□□□□ -0.73
RTTN-208ENST00000581709 TBC1D8O95759 1140 aa10.5□□□□□ -0.73
RTTN-208ENST00000581709 TOP1P11387 765 aaKnown RBP10.5□□□□□ -0.73
RTTN-208ENST00000581709 PSMA5P28066 241 aa10.5□□□□□ -0.73
RTTN-208ENST00000581709 HOXA7P31268 230 aaPredicted RBP10.5□□□□□ -0.73
RTTN-208ENST00000581709 MCM5P33992 734 aa10.5□□□□□ -0.73
RTTN-208ENST00000581709 USP17L24Q0WX57 530 aa10.5□□□□□ -0.73
RTTN-208ENST00000581709 TAF1CQ15572 869 aaPredicted RBP10.5□□□□□ -0.73
RTTN-208ENST00000581709 CLEC10AQ8IUN9 316 aa10.5□□□□□ -0.73
RTTN-208ENST00000581709 TMTC2Q8N394 836 aa10.5□□□□□ -0.73
RTTN-208ENST00000581709 C12orf42Q96LP6 360 aa10.5□□□□□ -0.73
RTTN-208ENST00000581709 NEK1Q96PY6 1258 aa10.5□□□□□ -0.73
RTTN-208ENST00000581709 PARK7Q99497 189 aaKnown RBP10.5□□□□□ -0.73
RTTN-208ENST00000581709 ZKSCAN3Q9BRR0 538 aa10.5□□□□□ -0.73
RTTN-208ENST00000581709 HOXC10Q9NYD6 342 aa10.5□□□□□ -0.73
RTTN-208ENST00000581709 PLIN4Q96Q06 1357 aa10.5□□□□□ -0.73
RTTN-208ENST00000581709 VCAM1P19320 739 aa10.49□□□□□ -0.73
RTTN-208ENST00000581709 NOVP48745 357 aa10.49□□□□□ -0.73
RTTN-208ENST00000581709 IRX3P78415 501 aaPredicted RBP10.49□□□□□ -0.73
RTTN-208ENST00000581709 DGKZQ13574 1117 aa10.49□□□□□ -0.73
RTTN-208ENST00000581709 COG2Q14746 738 aa10.49□□□□□ -0.73
RTTN-208ENST00000581709 TREML2Q5T2D2 321 aa10.49□□□□□ -0.73
RTTN-208ENST00000581709 CATSPERGQ6ZRH7 1159 aa10.49□□□□□ -0.73
RTTN-208ENST00000581709 STOX1Q6ZVD7 989 aa10.49□□□□□ -0.73
RTTN-208ENST00000581709 RASEFQ8IZ41 740 aa10.49□□□□□ -0.73
RTTN-208ENST00000581709 SPICE1Q8N0Z3 855 aa10.49□□□□□ -0.73
RTTN-208ENST00000581709 GMCL1P1Q8NEA9 526 aa10.49□□□□□ -0.73
RTTN-208ENST00000581709 SMCR8Q8TEV9 937 aaPredicted RBP10.49□□□□□ -0.73
RTTN-208ENST00000581709 ANKS1AQ92625 1134 aa10.49□□□□□ -0.73
RTTN-208ENST00000581709 KCNB2Q92953 911 aa10.49□□□□□ -0.73
RTTN-208ENST00000581709 TMEM47Q9BQJ4 181 aa10.49□□□□□ -0.73
RTTN-208ENST00000581709 MTA3Q9BTC8 594 aa10.49□□□□□ -0.73
RTTN-208ENST00000581709 RPAP3Q9H6T3 665 aaPredicted RBP10.49□□□□□ -0.73
RTTN-208ENST00000581709 KAT14Q9H8E8 782 aa10.49□□□□□ -0.73
RTTN-208ENST00000581709 TAF6LQ9Y6J9 622 aa10.49□□□□□ -0.73
RTTN-208ENST00000581709 MYH1P12882 1939 aa10.48□□□□□ -0.73
RTTN-208ENST00000581709 WDR46O15213 610 aaKnown RBP10.48□□□□□ -0.73
RTTN-208ENST00000581709 PRC1O43663 620 aa10.48□□□□□ -0.73
RTTN-208ENST00000581709 TLR2O60603 784 aa10.48□□□□□ -0.73
RTTN-208ENST00000581709 HSPA1AP0DMV8 641 aaKnown RBP10.48□□□□□ -0.73
RTTN-208ENST00000581709 HSPA1BP0DMV9 641 aaKnown RBP10.48□□□□□ -0.73
RTTN-208ENST00000581709 SLC1A4P43007 532 aa10.48□□□□□ -0.73
RTTN-208ENST00000581709 CTCFP49711 727 aaPredicted RBP10.48□□□□□ -0.73
RTTN-208ENST00000581709 CRHR2Q13324 411 aa10.48□□□□□ -0.73
RTTN-208ENST00000581709 C8orf34Q49A92 452 aa10.48□□□□□ -0.73
RTTN-208ENST00000581709 TMEM67Q5HYA8 995 aa10.48□□□□□ -0.73
RTTN-208ENST00000581709 IFIT1BQ5T764 474 aaKnown RBP10.48□□□□□ -0.73
RTTN-208ENST00000581709 SLFN13Q68D06 897 aa10.48□□□□□ -0.73
RTTN-208ENST00000581709 CYB5R4Q7L1T6 521 aa10.48□□□□□ -0.73
RTTN-208ENST00000581709 DHX32Q7L7V1 743 aaKnown RBP10.48□□□□□ -0.73
RTTN-208ENST00000581709 CHST3Q7LGC8 479 aa10.48□□□□□ -0.73
RTTN-208ENST00000581709 LRRC47Q8N1G4 583 aaKnown RBP10.48□□□□□ -0.73
RTTN-208ENST00000581709 ENAHQ8N8S7 591 aaPredicted RBP10.48□□□□□ -0.73
RTTN-208ENST00000581709 TMEM87BQ96K49 555 aa10.48□□□□□ -0.73
RTTN-208ENST00000581709 CFHR5Q9BXR6 569 aa10.48□□□□□ -0.73
RTTN-208ENST00000581709 TANGO6Q9C0B7 1094 aa10.48□□□□□ -0.73
RTTN-208ENST00000581709 ASCC2Q9H1I8 757 aaPredicted RBP10.48□□□□□ -0.73
RTTN-208ENST00000581709 UPF2Q9HAU5 1272 aaKnown RBP10.48□□□□□ -0.73
RTTN-208ENST00000581709 SNX14Q9Y5W7 946 aa10.48□□□□□ -0.73
RTTN-208ENST00000581709 FOCADQ5VW36 1801 aa10.48□□□□□ -0.73
RTTN-208ENST00000581709 CEP350Q5VT06 3117 aa10.48□□□□□ -0.73
RTTN-208ENST00000581709 SEC24BO95487 1268 aa10.47□□□□□ -0.73
RTTN-208ENST00000581709 NDUFB10O96000 172 aa10.47□□□□□ -0.73
RTTN-208ENST00000581709 CYP2C8P10632 490 aa10.47□□□□□ -0.73
RTTN-208ENST00000581709 BMP3P12645 472 aa10.47□□□□□ -0.73
RTTN-208ENST00000581709 GCLCP48506 637 aaPredicted RBP10.47□□□□□ -0.73
RTTN-208ENST00000581709 FGD1P98174 961 aa10.47□□□□□ -0.73
RTTN-208ENST00000581709 WTAPQ15007 396 aa10.47□□□□□ -0.73
RTTN-208ENST00000581709 KIAA1755Q5JYT7 1200 aa10.47□□□□□ -0.73
RTTN-208ENST00000581709 RCSD1Q6JBY9 416 aa10.47□□□□□ -0.73
RTTN-208ENST00000581709 MB21D2Q8IYB1 491 aaPredicted RBP10.47□□□□□ -0.73
RTTN-208ENST00000581709 NKX2-3Q8TAU0 364 aa10.47□□□□□ -0.73
RTTN-208ENST00000581709 IGDCC4Q8TDY8 1250 aa10.47□□□□□ -0.73
RTTN-208ENST00000581709 GTF3C2Q8WUA4 911 aaPredicted RBP10.47□□□□□ -0.73
RTTN-208ENST00000581709 CHURC1Q8WUH1 139 aa10.47□□□□□ -0.73
RTTN-208ENST00000581709 GMCL1Q96IK5 515 aa10.47□□□□□ -0.73
RTTN-208ENST00000581709 JAKMIP1Q96N16 626 aaKnown RBP10.47□□□□□ -0.73
RTTN-208ENST00000581709 P2RX7Q99572 595 aaKnown RBP10.47□□□□□ -0.73
RTTN-208ENST00000581709 FEM1BQ9UK73 627 aa10.47□□□□□ -0.73
RTTN-208ENST00000581709 ISY1Q9ULR0 285 aaKnown RBP10.47□□□□□ -0.73
RTTN-208ENST00000581709 MTMR7Q9Y216 660 aa10.47□□□□□ -0.73
RTTN-208ENST00000581709 TNKSO95271 1327 aa10.47□□□□□ -0.73
RTTN-208ENST00000581709 DDX60LQ5H9U9 1706 aaKnown RBP10.47□□□□□ -0.73
RTTN-208ENST00000581709 NAV1Q8NEY1 1877 aa10.47□□□□□ -0.73
RTTN-208ENST00000581709 FLOT1O75955 427 aa10.46□□□□□ -0.73
RTTN-208ENST00000581709 ANAPC15P60006 121 aa10.46□□□□□ -0.73
RTTN-208ENST00000581709 HERVK_113P62684 666 aa10.46□□□□□ -0.73
RTTN-208ENST00000581709 EXOSC10Q01780 885 aaKnown RBP10.46□□□□□ -0.73
RTTN-208ENST00000581709 IKQ13123 557 aaPredicted RBP10.46□□□□□ -0.73
RTTN-208ENST00000581709 ARHGEF6Q15052 776 aa10.46□□□□□ -0.73
RTTN-208ENST00000581709 ADCK5Q3MIX3 580 aa10.46□□□□□ -0.73
RTTN-208ENST00000581709 NOM1Q5C9Z4 860 aaKnown RBP10.46□□□□□ -0.73
RTTN-208ENST00000581709 FAM83BQ5T0W9 1011 aa10.46□□□□□ -0.73
RTTN-208ENST00000581709 BLOC1S2Q6QNY1 142 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms