RNA–Protein interactions for RNA: ENST00000581487.1

CMTM4-205, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

Gene CMTM4, Length 7,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-205ENST00000581487 EYA2O00167 538 aa8.22□□□□□ -1.09
CMTM4-205ENST00000581487 CREB3O43889 395 aa8.22□□□□□ -1.09
CMTM4-205ENST00000581487 CLTAP09496 248 aa8.22□□□□□ -1.09
CMTM4-205ENST00000581487 CCT5P48643 541 aa8.22□□□□□ -1.09
CMTM4-205ENST00000581487 PDE4BQ07343 736 aa8.22□□□□□ -1.09
CMTM4-205ENST00000581487 SNX1Q13596 522 aa8.22□□□□□ -1.09
CMTM4-205ENST00000581487 IFT20Q8IY31 132 aa8.22□□□□□ -1.09
CMTM4-205ENST00000581487 IGSF22Q8N9C0 903 aa8.22□□□□□ -1.09
CMTM4-205ENST00000581487 SH3GL3Q99963 347 aa8.22□□□□□ -1.09
CMTM4-205ENST00000581487 ZNF219Q9P2Y4 722 aaPredicted RBP8.22□□□□□ -1.09
CMTM4-205ENST00000581487 TEX28O15482 410 aa8.22□□□□□ -1.09
CMTM4-205ENST00000581487 KRT13P13646 458 aa8.22□□□□□ -1.09
CMTM4-205ENST00000581487 HSPA1LP34931 641 aa8.22□□□□□ -1.09
CMTM4-205ENST00000581487 MCCD1P59942 119 aaPredicted RBP8.22□□□□□ -1.09
CMTM4-205ENST00000581487 IFI16Q16666 785 aaKnown RBP8.22□□□□□ -1.09
CMTM4-205ENST00000581487 SYCP3Q8IZU3 236 aa8.22□□□□□ -1.09
CMTM4-205ENST00000581487 NFATC2IPQ8NCF5 419 aa8.22□□□□□ -1.09
CMTM4-205ENST00000581487 MCUR1Q96AQ8 359 aa8.22□□□□□ -1.09
CMTM4-205ENST00000581487 NDUFB9Q9Y6M9 179 aa8.22□□□□□ -1.09
CMTM4-205ENST00000581487 CYP7A1P22680 504 aa8.21□□□□□ -1.09
CMTM4-205ENST00000581487 NRG3P56975 720 aa8.21□□□□□ -1.09
CMTM4-205ENST00000581487 SESN3P58005 492 aa8.21□□□□□ -1.09
CMTM4-205ENST00000581487 UBXN1Q04323 297 aa8.21□□□□□ -1.09
CMTM4-205ENST00000581487 RILPL1Q5EBL4 403 aa8.21□□□□□ -1.09
CMTM4-205ENST00000581487 FNBP4Q8N3X1 1017 aaPredicted RBP8.21□□□□□ -1.09
CMTM4-205ENST00000581487 TDRD7Q8NHU6 1098 aaKnown RBP8.21□□□□□ -1.09
CMTM4-205ENST00000581487 LGR6Q9HBX8 967 aa8.21□□□□□ -1.09
CMTM4-205ENST00000581487 VCX3AQ9NNX9 186 aa8.21□□□□□ -1.09
CMTM4-205ENST00000581487 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.21□□□□□ -1.09
CMTM4-205ENST00000581487 SART1O43290 800 aaKnown RBP8.21□□□□□ -1.09
CMTM4-205ENST00000581487 ZNF202O95125 648 aa8.21□□□□□ -1.09
CMTM4-205ENST00000581487 TRMT1LQ7Z2T5 733 aaKnown RBP8.21□□□□□ -1.09
CMTM4-205ENST00000581487 KBTBD3Q8NAB2 608 aa8.21□□□□□ -1.09
CMTM4-205ENST00000581487 CCDC42Q96M95 316 aa8.21□□□□□ -1.09
CMTM4-205ENST00000581487 SLC8A3P57103 927 aa8.21□□□□□ -1.1
CMTM4-205ENST00000581487 TIMM10P62072 90 aa8.21□□□□□ -1.1
CMTM4-205ENST00000581487 GABPB2Q8TAK5 448 aaPredicted RBP8.21□□□□□ -1.1
CMTM4-205ENST00000581487 IP6K1Q92551 441 aa8.21□□□□□ -1.1
CMTM4-205ENST00000581487 NDEL1Q9GZM8 345 aa8.21□□□□□ -1.1
CMTM4-205ENST00000581487 FNDC3AQ9Y2H6 1198 aaKnown RBP8.21□□□□□ -1.1
CMTM4-205ENST00000581487 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.21□□□□□ -1.1
CMTM4-205ENST00000581487 COPG1Q9Y678 874 aaKnown RBP8.21□□□□□ -1.1
CMTM4-205ENST00000581487 GTPBP10A4D1E9 387 aaKnown RBP8.21□□□□□ -1.1
CMTM4-205ENST00000581487 EIF4A1P60842 406 aaKnown RBP8.21□□□□□ -1.1
CMTM4-205ENST00000581487 NONOQ15233 471 aaKnown RBP eCLIP8.21□□□□□ -1.1
CMTM4-205ENST00000581487 ARHGEF1Q92888 912 aaKnown RBP8.21□□□□□ -1.1
CMTM4-205ENST00000581487 USP28Q96RU2 1077 aa8.21□□□□□ -1.1
CMTM4-205ENST00000581487 SLC7A5P2Q9GIP4 190 aa8.21□□□□□ -1.1
CMTM4-205ENST00000581487 TTF2Q9UNY4 1162 aaKnown RBP8.21□□□□□ -1.1
CMTM4-205ENST00000581487 PLA2R1Q13018 1463 aa8.21□□□□□ -1.1
CMTM4-205ENST00000581487 A0A0D9SFI3 127 aa8.21□□□□□ -1.1
CMTM4-205ENST00000581487 NPR1P16066 1061 aa8.21□□□□□ -1.1
CMTM4-205ENST00000581487 KRT40Q6A162 431 aa8.21□□□□□ -1.1
CMTM4-205ENST00000581487 SAAL1Q96ER3 474 aa8.21□□□□□ -1.1
CMTM4-205ENST00000581487 METTL22Q9BUU2 404 aaPredicted RBP8.21□□□□□ -1.1
CMTM4-205ENST00000581487 CDV3Q9UKY7 258 aaKnown RBP8.21□□□□□ -1.1
CMTM4-205ENST00000581487 HIP1RO75146 1068 aa8.21□□□□□ -1.1
CMTM4-205ENST00000581487 DNAJC8O75937 253 aaPredicted RBP8.21□□□□□ -1.1
CMTM4-205ENST00000581487 ASIC1P78348 528 aa8.21□□□□□ -1.1
CMTM4-205ENST00000581487 IFIT1BQ5T764 474 aaKnown RBP8.21□□□□□ -1.1
CMTM4-205ENST00000581487 SMARCC2Q8TAQ2 1214 aa8.21□□□□□ -1.1
CMTM4-205ENST00000581487 EAF2Q96CJ1 260 aaPredicted RBP8.21□□□□□ -1.1
CMTM4-205ENST00000581487 NR1I2O75469 434 aa8.2□□□□□ -1.1
CMTM4-205ENST00000581487 TCERG1LQ5VWI1 586 aa8.2□□□□□ -1.1
CMTM4-205ENST00000581487 ARMCX6Q7L4S7 300 aa8.2□□□□□ -1.1
CMTM4-205ENST00000581487 IQUBQ8NA54 791 aa8.2□□□□□ -1.1
CMTM4-205ENST00000581487 FRMD6Q96NE9 622 aa8.2□□□□□ -1.1
CMTM4-205ENST00000581487 MRPS26Q9BYN8 205 aaKnown RBP8.2□□□□□ -1.1
CMTM4-205ENST00000581487 NFE2L3Q9Y4A8 694 aa8.2□□□□□ -1.1
CMTM4-205ENST00000581487 ATP10AO60312 1499 aa8.2□□□□□ -1.1
CMTM4-205ENST00000581487 KRT7P08729 469 aa8.2□□□□□ -1.1
CMTM4-205ENST00000581487 PDE6BP35913 854 aa8.2□□□□□ -1.1
CMTM4-205ENST00000581487 ADCK5Q3MIX3 580 aa8.2□□□□□ -1.1
CMTM4-205ENST00000581487 MYSM1Q5VVJ2 828 aa8.2□□□□□ -1.1
CMTM4-205ENST00000581487 DIS3L2Q8IYB7 885 aaKnown RBP8.2□□□□□ -1.1
CMTM4-205ENST00000581487 FAM186BQ8IYM0 893 aa8.2□□□□□ -1.1
CMTM4-205ENST00000581487 CACTINQ8WUQ7 758 aaKnown RBP8.2□□□□□ -1.1
CMTM4-205ENST00000581487 LRRC27Q9C0I9 530 aa8.2□□□□□ -1.1
CMTM4-205ENST00000581487 GIGYF1O75420 1035 aaPredicted RBP8.2□□□□□ -1.1
CMTM4-205ENST00000581487 LONP1P36776 959 aaKnown RBP8.2□□□□□ -1.1
CMTM4-205ENST00000581487 CCDC25Q86WR0 208 aa8.2□□□□□ -1.1
CMTM4-205ENST00000581487 NAPGQ99747 312 aaPredicted RBP8.2□□□□□ -1.1
CMTM4-205ENST00000581487 ATG3Q9NT62 314 aa8.2□□□□□ -1.1
CMTM4-205ENST00000581487 OLA1Q9NTK5 396 aaKnown RBP8.2□□□□□ -1.1
CMTM4-205ENST00000581487 TRPC5Q9UL62 973 aaPredicted RBP8.2□□□□□ -1.1
CMTM4-205ENST00000581487 IQSEC3Q9UPP2 1182 aaPredicted RBP8.2□□□□□ -1.1
CMTM4-205ENST00000581487 SAMM50Q9Y512 469 aa8.2□□□□□ -1.1
CMTM4-205ENST00000581487 ABCA5Q8WWZ7 1642 aa8.2□□□□□ -1.1
CMTM4-205ENST00000581487 CUTAO60888 179 aa8.2□□□□□ -1.1
CMTM4-205ENST00000581487 IL1RL1Q01638 556 aa8.2□□□□□ -1.1
CMTM4-205ENST00000581487 TSTA3Q13630 321 aaPredicted RBP8.2□□□□□ -1.1
CMTM4-205ENST00000581487 CCDC122Q5T0U0 273 aa8.2□□□□□ -1.1
CMTM4-205ENST00000581487 TTC19Q6DKK2 380 aaPredicted RBP8.2□□□□□ -1.1
CMTM4-205ENST00000581487 VSIG1Q86XK7 387 aa8.2□□□□□ -1.1
CMTM4-205ENST00000581487 MLKLQ8NB16 471 aa8.2□□□□□ -1.1
CMTM4-205ENST00000581487 EDC3Q96F86 508 aaKnown RBP8.2□□□□□ -1.1
CMTM4-205ENST00000581487 CAPS2Q9BXY5 557 aa8.2□□□□□ -1.1
CMTM4-205ENST00000581487 SCOCQ9UIL1 159 aa8.2□□□□□ -1.1
CMTM4-205ENST00000581487 KRT2P35908 639 aa8.2□□□□□ -1.1
CMTM4-205ENST00000581487 ADALQ6DHV7 355 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms