RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 KCNH3Q9ULD8 1083 aa6.98□□□□□ -1.29
NF1-220ENST00000581113 COL17A1Q9UMD9 1497 aaPredicted RBP6.98□□□□□ -1.29
NF1-220ENST00000581113 SPINK2P20155 84 aa6.98□□□□□ -1.29
NF1-220ENST00000581113 ETFBP38117 255 aa6.98□□□□□ -1.29
NF1-220ENST00000581113 NBPF12Q5TAG4 269 aaPredicted RBP6.98□□□□□ -1.29
NF1-220ENST00000581113 HRASLS5Q96KN8 279 aa6.98□□□□□ -1.29
NF1-220ENST00000581113 FBXL18Q96ME1 805 aa6.98□□□□□ -1.29
NF1-220ENST00000581113 TNKS2Q9H2K2 1166 aa6.98□□□□□ -1.29
NF1-220ENST00000581113 ZNF408Q9H9D4 720 aa6.98□□□□□ -1.29
NF1-220ENST00000581113 ANGEL1Q9UNK9 670 aaKnown RBP6.98□□□□□ -1.29
NF1-220ENST00000581113 A0A1W2PQH9 124 aa6.97□□□□□ -1.29
NF1-220ENST00000581113 SMAD7O15105 426 aaKnown RBP6.97□□□□□ -1.29
NF1-220ENST00000581113 HYAL3O43820 417 aaPredicted RBP6.97□□□□□ -1.29
NF1-220ENST00000581113 CLCN7P51798 805 aa6.97□□□□□ -1.29
NF1-220ENST00000581113 AOC3Q16853 763 aa6.97□□□□□ -1.29
NF1-220ENST00000581113 TDRD10Q5VZ19 366 aaKnown RBP6.97□□□□□ -1.29
NF1-220ENST00000581113 C19orf47Q8N9M1 422 aaKnown RBP6.97□□□□□ -1.29
NF1-220ENST00000581113 DTWD2Q8NBA8 298 aa6.97□□□□□ -1.29
NF1-220ENST00000581113 VWCEQ96DN2 955 aa6.97□□□□□ -1.29
NF1-220ENST00000581113 HSPA12BQ96MM6 686 aa6.97□□□□□ -1.29
NF1-220ENST00000581113 FAM86C1Q9NVL1 165 aa6.97□□□□□ -1.29
NF1-220ENST00000581113 SUCOQ9UBS9 1254 aaKnown RBP6.97□□□□□ -1.29
NF1-220ENST00000581113 SLC12A7Q9Y666 1083 aa6.97□□□□□ -1.29
NF1-220ENST00000581113 H3BS24 57 aa6.96□□□□□ -1.3
NF1-220ENST00000581113 PRKCQQ04759 706 aa6.96□□□□□ -1.3
NF1-220ENST00000581113 PIWIL2Q8TC59 973 aaKnown RBP6.96□□□□□ -1.3
NF1-220ENST00000581113 CCDC39Q9UFE4 941 aa6.96□□□□□ -1.3
NF1-220ENST00000581113 SNX11Q9Y5W9 270 aa6.96□□□□□ -1.3
NF1-220ENST00000581113 ST14Q9Y5Y6 855 aa6.96□□□□□ -1.3
NF1-220ENST00000581113 LTBP3Q9NS15 1303 aa6.95□□□□□ -1.3
NF1-220ENST00000581113 ATP2B1P20020 1258 aa6.95□□□□□ -1.3
NF1-220ENST00000581113 CD96P40200 585 aa6.95□□□□□ -1.3
NF1-220ENST00000581113 PMS1P54277 932 aaKnown RBP6.95□□□□□ -1.3
NF1-220ENST00000581113 CASP7P55210 303 aa6.95□□□□□ -1.3
NF1-220ENST00000581113 BNIP3Q12983 259 aa6.95□□□□□ -1.3
NF1-220ENST00000581113 TNNI3KQ59H18 835 aa6.95□□□□□ -1.3
NF1-220ENST00000581113 ARTNQ5T4W7 220 aa6.95□□□□□ -1.3
NF1-220ENST00000581113 VSIG10LQ86VR7 867 aa6.95□□□□□ -1.3
NF1-220ENST00000581113 CCDC144CPQ8IYA2 1237 aa6.95□□□□□ -1.3
NF1-220ENST00000581113 STK11IPQ8N1F8 1099 aa6.95□□□□□ -1.3
NF1-220ENST00000581113 BCL7CQ8WUZ0 217 aaPredicted RBP6.95□□□□□ -1.3
NF1-220ENST00000581113 MISP3Q96FF7 219 aa6.95□□□□□ -1.3
NF1-220ENST00000581113 ZFP64Q9NPA5 681 aa6.95□□□□□ -1.3
NF1-220ENST00000581113 ZSWIM5Q9P217 1185 aa6.95□□□□□ -1.3
NF1-220ENST00000581113 PRKAG3Q9UGI9 489 aa6.95□□□□□ -1.3
NF1-220ENST00000581113 VAV3Q9UKW4 847 aa6.95□□□□□ -1.3
NF1-220ENST00000581113 PCDHB10Q9UN67 800 aa6.95□□□□□ -1.3
NF1-220ENST00000581113 SLC5A6Q9Y289 635 aa6.95□□□□□ -1.3
NF1-220ENST00000581113 C9IYK1 514 aa6.94□□□□□ -1.3
NF1-220ENST00000581113 PRNPP04156 253 aa6.94□□□□□ -1.3
NF1-220ENST00000581113 TP53P04637 393 aaPredicted RBP6.94□□□□□ -1.3
NF1-220ENST00000581113 FLCNQ8NFG4 579 aa6.94□□□□□ -1.3
NF1-220ENST00000581113 ASB11Q8WXH4 323 aa6.94□□□□□ -1.3
NF1-220ENST00000581113 UBE2FQ969M7 185 aa6.94□□□□□ -1.3
NF1-220ENST00000581113 ASCC2Q9H1I8 757 aaPredicted RBP6.94□□□□□ -1.3
NF1-220ENST00000581113 PHAXQ9H814 394 aaKnown RBP6.94□□□□□ -1.3
NF1-220ENST00000581113 ACTR10Q9NZ32 417 aa6.94□□□□□ -1.3
NF1-220ENST00000581113 PPP1R1BQ9UD71 204 aaPredicted RBP6.94□□□□□ -1.3
NF1-220ENST00000581113 ZNF214Q9UL59 606 aaPredicted RBP6.94□□□□□ -1.3
NF1-220ENST00000581113 PITPNM2Q9BZ72 1349 aa6.94□□□□□ -1.3
NF1-220ENST00000581113 WNT11O96014 354 aa6.93□□□□□ -1.3
NF1-220ENST00000581113 NBPF9Q3BBW0 867 aa6.93□□□□□ -1.3
NF1-220ENST00000581113 BBS9Q3SYG4 887 aa6.93□□□□□ -1.3
NF1-220ENST00000581113 GNPTABQ3T906 1256 aa6.93□□□□□ -1.3
NF1-220ENST00000581113 LARP1BQ659C4 914 aaKnown RBP6.93□□□□□ -1.3
NF1-220ENST00000581113 ZNF574Q6ZN55 896 aaPredicted RBP6.93□□□□□ -1.3
NF1-220ENST00000581113 PPFIBP1Q86W92 1011 aa6.93□□□□□ -1.3
NF1-220ENST00000581113 TRIT1Q9H3H1 467 aaKnown RBP6.93□□□□□ -1.3
NF1-220ENST00000581113 ATP13A1Q9HD20 1204 aa6.93□□□□□ -1.3
NF1-220ENST00000581113 GPATCH2Q9NW75 528 aa6.93□□□□□ -1.3
NF1-220ENST00000581113 FBXL21Q9UKT6 434 aa6.93□□□□□ -1.3
NF1-220ENST00000581113 R3HCC1Q9Y3T6 440 aaKnown RBP6.93□□□□□ -1.3
NF1-220ENST00000581113 ADAMTS4O75173 837 aa6.92□□□□□ -1.3
NF1-220ENST00000581113 STK10O94804 968 aaKnown RBP6.92□□□□□ -1.3
NF1-220ENST00000581113 GTF2F1P35269 517 aaKnown RBP eCLIP6.92□□□□□ -1.3
NF1-220ENST00000581113 IKZF1Q13422 519 aa6.92□□□□□ -1.3
NF1-220ENST00000581113 SNW1Q13573 536 aaKnown RBP6.92□□□□□ -1.3
NF1-220ENST00000581113 AUHQ13825 339 aaKnown RBP6.92□□□□□ -1.3
NF1-220ENST00000581113 SF3A1Q15459 793 aaKnown RBP6.92□□□□□ -1.3
NF1-220ENST00000581113 CLEC16AQ2KHT3 1053 aa6.92□□□□□ -1.3
NF1-220ENST00000581113 THAP5Q7Z6K1 395 aa6.92□□□□□ -1.3
NF1-220ENST00000581113 DUSP15Q9H1R2 295 aaPredicted RBP6.92□□□□□ -1.3
NF1-220ENST00000581113 SEMA3GQ9NS98 782 aa6.92□□□□□ -1.3
NF1-220ENST00000581113 PCDHB12Q9Y5F1 795 aa6.92□□□□□ -1.3
NF1-220ENST00000581113 SHISA3A0PJX4 238 aa6.92□□□□□ -1.3
NF1-220ENST00000581113 WASH4PA8MWX3 477 aa6.92□□□□□ -1.3
NF1-220ENST00000581113 RANGAP1P46060 587 aaPredicted RBP6.92□□□□□ -1.3
NF1-220ENST00000581113 SLC7A5Q01650 507 aa6.92□□□□□ -1.3
NF1-220ENST00000581113 NMIQ13287 307 aaPredicted RBP6.92□□□□□ -1.3
NF1-220ENST00000581113 AXDND1Q5T1B0 1012 aaPredicted RBP6.92□□□□□ -1.3
NF1-220ENST00000581113 DCAF15Q66K64 600 aa6.92□□□□□ -1.3
NF1-220ENST00000581113 VHLLQ6RSH7 139 aa6.92□□□□□ -1.3
NF1-220ENST00000581113 ANKS3Q6ZW76 656 aa6.92□□□□□ -1.3
NF1-220ENST00000581113 TMC3Q7Z5M5 1100 aa6.92□□□□□ -1.3
NF1-220ENST00000581113 SPRED2Q7Z698 418 aa6.92□□□□□ -1.3
NF1-220ENST00000581113 TP53INP2Q8IXH6 220 aa6.92□□□□□ -1.3
NF1-220ENST00000581113 HNRNPLLQ8WVV9 542 aaKnown RBP6.92□□□□□ -1.3
NF1-220ENST00000581113 SMARCC1Q92922 1105 aaPredicted RBP6.92□□□□□ -1.3
NF1-220ENST00000581113 GPR62Q9BZJ7 368 aa6.92□□□□□ -1.3
NF1-220ENST00000581113 PRDM14Q9GZV8 571 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms