RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 H3BQV1 296 aa7.15□□□□□ -1.26
RNU4ATAC-201ENST00000580972 FIBPO43427 364 aa7.15□□□□□ -1.26
RNU4ATAC-201ENST00000580972 MYO1BO43795 1136 aa7.15□□□□□ -1.26
RNU4ATAC-201ENST00000580972 RAD21O60216 631 aa7.15□□□□□ -1.26
RNU4ATAC-201ENST00000580972 GADD45BO75293 160 aaPredicted RBP7.15□□□□□ -1.26
RNU4ATAC-201ENST00000580972 POTEIP0CG38 1075 aa7.15□□□□□ -1.26
RNU4ATAC-201ENST00000580972 POTEJP0CG39 1038 aa7.15□□□□□ -1.26
RNU4ATAC-201ENST00000580972 PDHBP11177 359 aa7.15□□□□□ -1.26
RNU4ATAC-201ENST00000580972 INPP5BP32019 993 aa7.15□□□□□ -1.26
RNU4ATAC-201ENST00000580972 SLC16A2P36021 539 aa7.15□□□□□ -1.26
RNU4ATAC-201ENST00000580972 FMR1Q06787 632 aaKnown RBP eCLIP7.15□□□□□ -1.26
RNU4ATAC-201ENST00000580972 ZYXQ15942 572 aaKnown RBP7.15□□□□□ -1.26
RNU4ATAC-201ENST00000580972 CCDC96Q2M329 555 aa7.15□□□□□ -1.26
RNU4ATAC-201ENST00000580972 IFFO2Q5TF58 517 aa7.15□□□□□ -1.26
RNU4ATAC-201ENST00000580972 FKBP1CQ5VVH2 108 aa7.15□□□□□ -1.26
RNU4ATAC-201ENST00000580972 KRT40Q6A162 431 aa7.15□□□□□ -1.26
RNU4ATAC-201ENST00000580972 TYW1BQ6NUM6 668 aa7.15□□□□□ -1.26
RNU4ATAC-201ENST00000580972 KCTD1Q719H9 257 aa7.15□□□□□ -1.26
RNU4ATAC-201ENST00000580972 FAM83AQ86UY5 434 aa7.15□□□□□ -1.26
RNU4ATAC-201ENST00000580972 CTCFLQ8NI51 663 aaPredicted RBP7.15□□□□□ -1.26
RNU4ATAC-201ENST00000580972 ZNF287Q9HBT7 754 aa7.15□□□□□ -1.26
RNU4ATAC-201ENST00000580972 VAT1LQ9HCJ6 419 aa7.15□□□□□ -1.26
RNU4ATAC-201ENST00000580972 TFIP11Q9UBB9 837 aaKnown RBP7.15□□□□□ -1.26
RNU4ATAC-201ENST00000580972 ZBTB21Q9ULJ3 1066 aa7.15□□□□□ -1.26
RNU4ATAC-201ENST00000580972 ISY1Q9ULR0 285 aaKnown RBP7.15□□□□□ -1.26
RNU4ATAC-201ENST00000580972 COL2A1P02458 1487 aaPredicted RBP7.15□□□□□ -1.27
RNU4ATAC-201ENST00000580972 SSC5DA1L4H1 1573 aa7.15□□□□□ -1.27
RNU4ATAC-201ENST00000580972 MYH13Q9UKX3 1938 aa7.15□□□□□ -1.27
RNU4ATAC-201ENST00000580972 KLRF2D3W0D1 207 aa7.14□□□□□ -1.27
RNU4ATAC-201ENST00000580972 PRPF3O43395 683 aaKnown RBP7.14□□□□□ -1.27
RNU4ATAC-201ENST00000580972 DHX16O60231 1041 aaKnown RBP7.14□□□□□ -1.27
RNU4ATAC-201ENST00000580972 PRPF40AO75400 957 aaKnown RBP7.14□□□□□ -1.27
RNU4ATAC-201ENST00000580972 CDKL5O76039 1030 aa7.14□□□□□ -1.27
RNU4ATAC-201ENST00000580972 TTLL1O95922 423 aa7.14□□□□□ -1.27
RNU4ATAC-201ENST00000580972 NDUFB10O96000 172 aa7.14□□□□□ -1.27
RNU4ATAC-201ENST00000580972 NCLP19338 710 aaKnown RBP7.14□□□□□ -1.27
RNU4ATAC-201ENST00000580972 BRCA1P38398 1863 aaKnown RBP7.14□□□□□ -1.27
RNU4ATAC-201ENST00000580972 RCAN1P53805 252 aa7.14□□□□□ -1.27
RNU4ATAC-201ENST00000580972 KIF23Q02241 960 aaPredicted RBP7.14□□□□□ -1.27
RNU4ATAC-201ENST00000580972 CEBPZQ03701 1054 aaKnown RBP7.14□□□□□ -1.27
RNU4ATAC-201ENST00000580972 NR5A1Q13285 461 aa7.14□□□□□ -1.27
RNU4ATAC-201ENST00000580972 NPY5RQ15761 445 aa7.14□□□□□ -1.27
RNU4ATAC-201ENST00000580972 EARS2Q5JPH6 523 aaKnown RBP7.14□□□□□ -1.27
RNU4ATAC-201ENST00000580972 CPLX2Q6PUV4 134 aaKnown RBP7.14□□□□□ -1.27
RNU4ATAC-201ENST00000580972 CLEC17AQ6ZS10 378 aa7.14□□□□□ -1.27
RNU4ATAC-201ENST00000580972 TMEM179Q6ZVK1 233 aa7.14□□□□□ -1.27
RNU4ATAC-201ENST00000580972 MOB2Q70IA6 237 aa7.14□□□□□ -1.27
RNU4ATAC-201ENST00000580972 SPICE1Q8N0Z3 855 aa7.14□□□□□ -1.27
RNU4ATAC-201ENST00000580972 FBXO18Q8NFZ0 1043 aa7.14□□□□□ -1.27
RNU4ATAC-201ENST00000580972 CCDC17Q96LX7 622 aa7.14□□□□□ -1.27
RNU4ATAC-201ENST00000580972 STK36Q9NRP7 1315 aa7.14□□□□□ -1.27
RNU4ATAC-201ENST00000580972 LMBRD1Q9NUN5 540 aa7.14□□□□□ -1.27
RNU4ATAC-201ENST00000580972 RBM28Q9NW13 759 aaKnown RBP7.14□□□□□ -1.27
RNU4ATAC-201ENST00000580972 RBM27Q9P2N5 1060 aaKnown RBP7.14□□□□□ -1.27
RNU4ATAC-201ENST00000580972 MYH7P12883 1935 aa7.13□□□□□ -1.27
RNU4ATAC-201ENST00000580972 FER1L6Q2WGJ9 1857 aa7.13□□□□□ -1.27
RNU4ATAC-201ENST00000580972 LAMA4Q16363 1823 aa7.13□□□□□ -1.27
RNU4ATAC-201ENST00000580972 USP17L10C9JJH3 530 aa7.13□□□□□ -1.27
RNU4ATAC-201ENST00000580972 WNT7AO00755 349 aa7.13□□□□□ -1.27
RNU4ATAC-201ENST00000580972 PPP1R11O60927 126 aaPredicted RBP7.13□□□□□ -1.27
RNU4ATAC-201ENST00000580972 DEXIO95424 95 aa7.13□□□□□ -1.27
RNU4ATAC-201ENST00000580972 PARP1P09874 1014 aaKnown RBP7.13□□□□□ -1.27
RNU4ATAC-201ENST00000580972 CALM1P0DP23 149 aa7.13□□□□□ -1.27
RNU4ATAC-201ENST00000580972 CALM2P0DP24 149 aa7.13□□□□□ -1.27
RNU4ATAC-201ENST00000580972 CALM3P0DP25 149 aa7.13□□□□□ -1.27
RNU4ATAC-201ENST00000580972 SNHG28P0DPA3 235 aa7.13□□□□□ -1.27
RNU4ATAC-201ENST00000580972 PDCP20941 246 aa7.13□□□□□ -1.27
RNU4ATAC-201ENST00000580972 LMOD1P29536 600 aaPredicted RBP7.13□□□□□ -1.27
RNU4ATAC-201ENST00000580972 EPHX2P34913 555 aa7.13□□□□□ -1.27
RNU4ATAC-201ENST00000580972 CAP2P40123 477 aa7.13□□□□□ -1.27
RNU4ATAC-201ENST00000580972 TNNI2P48788 182 aa7.13□□□□□ -1.27
RNU4ATAC-201ENST00000580972 ZNF543Q08ER8 600 aa7.13□□□□□ -1.27
RNU4ATAC-201ENST00000580972 EAPPQ56P03 285 aaPredicted RBP7.13□□□□□ -1.27
RNU4ATAC-201ENST00000580972 CCDC178Q5BJE1 867 aa7.13□□□□□ -1.27
RNU4ATAC-201ENST00000580972 SLFN13Q68D06 897 aa7.13□□□□□ -1.27
RNU4ATAC-201ENST00000580972 WWC2Q6AWC2 1192 aa7.13□□□□□ -1.27
RNU4ATAC-201ENST00000580972 USP48Q86UV5 1035 aa7.13□□□□□ -1.27
RNU4ATAC-201ENST00000580972 HOMER1Q86YM7 354 aa7.13□□□□□ -1.27
RNU4ATAC-201ENST00000580972 RASGRP4Q8TDF6 673 aa7.13□□□□□ -1.27
RNU4ATAC-201ENST00000580972 CNKSR2Q8WXI2 1034 aa7.13□□□□□ -1.27
RNU4ATAC-201ENST00000580972 ZKSCAN4Q969J2 545 aaPredicted RBP7.13□□□□□ -1.27
RNU4ATAC-201ENST00000580972 L3MBTL3Q96JM7 780 aaPredicted RBP7.13□□□□□ -1.27
RNU4ATAC-201ENST00000580972 GBP4Q96PP9 640 aa7.13□□□□□ -1.27
RNU4ATAC-201ENST00000580972 USP28Q96RU2 1077 aa7.13□□□□□ -1.27
RNU4ATAC-201ENST00000580972 PIGSQ96S52 555 aa7.13□□□□□ -1.27
RNU4ATAC-201ENST00000580972 ANP32EQ9BTT0 268 aa7.13□□□□□ -1.27
RNU4ATAC-201ENST00000580972 RNF26Q9BY78 433 aaPredicted RBP7.13□□□□□ -1.27
RNU4ATAC-201ENST00000580972 KANSL2Q9H9L4 492 aa7.13□□□□□ -1.27
RNU4ATAC-201ENST00000580972 ADARB2Q9NS39 739 aaKnown RBP7.13□□□□□ -1.27
RNU4ATAC-201ENST00000580972 NYAP2Q9P242 653 aa7.13□□□□□ -1.27
RNU4ATAC-201ENST00000580972 HERC5Q9UII4 1024 aaKnown RBP7.13□□□□□ -1.27
RNU4ATAC-201ENST00000580972 NAV1Q8NEY1 1877 aa7.13□□□□□ -1.27
RNU4ATAC-201ENST00000580972 CCDC196A0A1B0GTZ2 297 aa7.12□□□□□ -1.27
RNU4ATAC-201ENST00000580972 GLTPD2A6NH11 291 aa7.12□□□□□ -1.27
RNU4ATAC-201ENST00000580972 BTBD18B2RXH4 712 aa7.12□□□□□ -1.27
RNU4ATAC-201ENST00000580972 STXBP3O00186 592 aa7.12□□□□□ -1.27
RNU4ATAC-201ENST00000580972 TRAF5O00463 557 aa7.12□□□□□ -1.27
RNU4ATAC-201ENST00000580972 TBC1D12O60347 775 aa7.12□□□□□ -1.27
RNU4ATAC-201ENST00000580972 GRIN3BO60391 1043 aa7.12□□□□□ -1.27
RNU4ATAC-201ENST00000580972 SCG2P13521 617 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms