RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 ORC3Q9UBD5 711 aaPredicted RBP16.1■□□□□ 0.17
CDK5RAP3-219ENST00000580670 KIF3AQ9Y496 699 aa16.1■□□□□ 0.17
CDK5RAP3-219ENST00000580670 CTNND1O60716 968 aaKnown RBP16.1■□□□□ 0.17
CDK5RAP3-219ENST00000580670 PLEKHA8P1O95397 391 aa16.1■□□□□ 0.17
CDK5RAP3-219ENST00000580670 ASNSP08243 561 aa16.1■□□□□ 0.17
CDK5RAP3-219ENST00000580670 FDPSP14324 419 aaKnown RBP16.1■□□□□ 0.17
CDK5RAP3-219ENST00000580670 PDCP20941 246 aa16.1■□□□□ 0.17
CDK5RAP3-219ENST00000580670 SYT1P21579 422 aa16.1■□□□□ 0.17
CDK5RAP3-219ENST00000580670 SSRP1Q08945 709 aaKnown RBP16.1■□□□□ 0.17
CDK5RAP3-219ENST00000580670 LARP1BQ659C4 914 aaKnown RBP16.1■□□□□ 0.17
CDK5RAP3-219ENST00000580670 TMTC3Q6ZXV5 915 aa16.1■□□□□ 0.17
CDK5RAP3-219ENST00000580670 USP48Q86UV5 1035 aa16.1■□□□□ 0.17
CDK5RAP3-219ENST00000580670 SIAH1Q8IUQ4 282 aa16.1■□□□□ 0.17
CDK5RAP3-219ENST00000580670 CCDC82Q8N4S0 544 aa16.1■□□□□ 0.17
CDK5RAP3-219ENST00000580670 MKL1Q969V6 931 aa16.1■□□□□ 0.17
CDK5RAP3-219ENST00000580670 RRAGCQ9HB90 399 aa16.1■□□□□ 0.17
CDK5RAP3-219ENST00000580670 CLEC11AQ9Y240 323 aa16.1■□□□□ 0.17
CDK5RAP3-219ENST00000580670 SSC5DA1L4H1 1573 aa16.1■□□□□ 0.17
CDK5RAP3-219ENST00000580670 PARP1P09874 1014 aaKnown RBP16.09■□□□□ 0.17
CDK5RAP3-219ENST00000580670 VEGFAP15692 232 aaPredicted RBP16.09■□□□□ 0.17
CDK5RAP3-219ENST00000580670 RASGRP2Q7LDG7 609 aa16.09■□□□□ 0.17
CDK5RAP3-219ENST00000580670 SLC26A6Q9BXS9 759 aa16.09■□□□□ 0.17
CDK5RAP3-219ENST00000580670 MAD2L2Q9UI95 211 aa16.09■□□□□ 0.17
CDK5RAP3-219ENST00000580670 USP17L5A8MUK1 530 aa16.08■□□□□ 0.17
CDK5RAP3-219ENST00000580670 STX6O43752 255 aa16.08■□□□□ 0.17
CDK5RAP3-219ENST00000580670 FMNL1O95466 1100 aaPredicted RBP16.08■□□□□ 0.17
CDK5RAP3-219ENST00000580670 INPP5BP32019 993 aa16.08■□□□□ 0.17
CDK5RAP3-219ENST00000580670 GNAQP50148 359 aa16.08■□□□□ 0.17
CDK5RAP3-219ENST00000580670 USP17L2Q6R6M4 530 aa16.08■□□□□ 0.17
CDK5RAP3-219ENST00000580670 TRIM22Q8IYM9 498 aa16.08■□□□□ 0.17
CDK5RAP3-219ENST00000580670 STAG2Q8N3U4 1231 aa16.08■□□□□ 0.17
CDK5RAP3-219ENST00000580670 WRNIP1Q96S55 665 aa16.08■□□□□ 0.17
CDK5RAP3-219ENST00000580670 ARHGEF10LQ9HCE6 1279 aa16.08■□□□□ 0.17
CDK5RAP3-219ENST00000580670 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.08■□□□□ 0.17
CDK5RAP3-219ENST00000580670 ZNF112Q9UJU3 913 aa16.08■□□□□ 0.17
CDK5RAP3-219ENST00000580670 FZD1Q9UP38 647 aa16.08■□□□□ 0.17
CDK5RAP3-219ENST00000580670 PALM3A6NDB9 673 aaPredicted RBP16.08■□□□□ 0.16
CDK5RAP3-219ENST00000580670 PDHBP11177 359 aa16.08■□□□□ 0.16
CDK5RAP3-219ENST00000580670 PRKG1Q13976 671 aa16.08■□□□□ 0.16
CDK5RAP3-219ENST00000580670 NBPF11Q86T75 865 aa16.08■□□□□ 0.16
CDK5RAP3-219ENST00000580670 SRBD1Q8N5C6 995 aaKnown RBP16.08■□□□□ 0.16
CDK5RAP3-219ENST00000580670 GLIS2Q9BZE0 524 aaPredicted RBP16.08■□□□□ 0.16
CDK5RAP3-219ENST00000580670 GINM1Q9NU53 330 aa16.08■□□□□ 0.16
CDK5RAP3-219ENST00000580670 ZDHHC9Q9Y397 364 aa16.08■□□□□ 0.16
CDK5RAP3-219ENST00000580670 ATAD5Q96QE3 1844 aa16.07■□□□□ 0.16
CDK5RAP3-219ENST00000580670 STK36Q9NRP7 1315 aa16.07■□□□□ 0.16
CDK5RAP3-219ENST00000580670 RAD21O60216 631 aa16.07■□□□□ 0.16
CDK5RAP3-219ENST00000580670 POTEIP0CG38 1075 aa16.07■□□□□ 0.16
CDK5RAP3-219ENST00000580670 POTEJP0CG39 1038 aa16.07■□□□□ 0.16
CDK5RAP3-219ENST00000580670 GOLGA8HP0CJ92 632 aa16.07■□□□□ 0.16
CDK5RAP3-219ENST00000580670 FOSBP53539 338 aa16.07■□□□□ 0.16
CDK5RAP3-219ENST00000580670 AKAP17AQ02040 695 aaKnown RBP16.07■□□□□ 0.16
CDK5RAP3-219ENST00000580670 FUT2Q10981 343 aa16.07■□□□□ 0.16
CDK5RAP3-219ENST00000580670 FOXD4L5Q5VV16 416 aaPredicted RBP16.07■□□□□ 0.16
CDK5RAP3-219ENST00000580670 CDC37L1Q7L3B6 337 aa16.07■□□□□ 0.16
CDK5RAP3-219ENST00000580670 FOXD4L4Q8WXT5 416 aaPredicted RBP16.07■□□□□ 0.16
CDK5RAP3-219ENST00000580670 KLRG1Q96E93 195 aa16.07■□□□□ 0.16
CDK5RAP3-219ENST00000580670 CDCA5Q96FF9 252 aa16.07■□□□□ 0.16
CDK5RAP3-219ENST00000580670 WDR33Q9C0J8 1336 aaKnown RBP16.06■□□□□ 0.16
CDK5RAP3-219ENST00000580670 A0A1W2PRG0 241 aa16.06■□□□□ 0.16
CDK5RAP3-219ENST00000580670 VPS37CA5D8V6 355 aaPredicted RBP16.06■□□□□ 0.16
CDK5RAP3-219ENST00000580670 KLRF2D3W0D1 207 aa16.06■□□□□ 0.16
CDK5RAP3-219ENST00000580670 BRD1O95696 1058 aa16.06■□□□□ 0.16
CDK5RAP3-219ENST00000580670 SNHG28P0DPA3 235 aa16.06■□□□□ 0.16
CDK5RAP3-219ENST00000580670 PDIA4P13667 645 aaKnown RBP16.06■□□□□ 0.16
CDK5RAP3-219ENST00000580670 ECE1P42892 770 aa16.06■□□□□ 0.16
CDK5RAP3-219ENST00000580670 ASPRV1Q53RT3 343 aa16.06■□□□□ 0.16
CDK5RAP3-219ENST00000580670 CCDC84Q86UT8 332 aaPredicted RBP16.06■□□□□ 0.16
CDK5RAP3-219ENST00000580670 ACER1Q8TDN7 264 aa16.06■□□□□ 0.16
CDK5RAP3-219ENST00000580670 ZNF526Q8TF50 670 aaPredicted RBP16.06■□□□□ 0.16
CDK5RAP3-219ENST00000580670 LZTS2Q9BRK4 669 aa16.06■□□□□ 0.16
CDK5RAP3-219ENST00000580670 RNF26Q9BY78 433 aaPredicted RBP16.06■□□□□ 0.16
CDK5RAP3-219ENST00000580670 SYNPO2Q9UMS6 1093 aa16.06■□□□□ 0.16
CDK5RAP3-219ENST00000580670 FRMPD2Q68DX3 1309 aaPredicted RBP16.06■□□□□ 0.16
CDK5RAP3-219ENST00000580670 CNTNAP5Q8WYK1 1306 aa16.06■□□□□ 0.16
CDK5RAP3-219ENST00000580670 USP2O75604 605 aaPredicted RBP16.05■□□□□ 0.16
CDK5RAP3-219ENST00000580670 NF2P35240 595 aa16.05■□□□□ 0.16
CDK5RAP3-219ENST00000580670 CCDC96Q2M329 555 aa16.05■□□□□ 0.16
CDK5RAP3-219ENST00000580670 SLFN13Q68D06 897 aa16.05■□□□□ 0.16
CDK5RAP3-219ENST00000580670 SCYL3Q8IZE3 742 aa16.05■□□□□ 0.16
CDK5RAP3-219ENST00000580670 GMCL1P1Q8NEA9 526 aa16.05■□□□□ 0.16
CDK5RAP3-219ENST00000580670 WASF1Q92558 559 aa16.05■□□□□ 0.16
CDK5RAP3-219ENST00000580670 ZKSCAN4Q969J2 545 aaPredicted RBP16.05■□□□□ 0.16
CDK5RAP3-219ENST00000580670 ALG1Q9BT22 464 aa16.05■□□□□ 0.16
CDK5RAP3-219ENST00000580670 PICK1Q9NRD5 415 aa16.05■□□□□ 0.16
CDK5RAP3-219ENST00000580670 MTMR6Q9Y217 621 aa16.05■□□□□ 0.16
CDK5RAP3-219ENST00000580670 TMX2Q9Y320 296 aa16.05■□□□□ 0.16
CDK5RAP3-219ENST00000580670 DOCK1Q14185 1865 aa16.05■□□□□ 0.16
CDK5RAP3-219ENST00000580670 F5H6K3 240 aa16.05■□□□□ 0.16
CDK5RAP3-219ENST00000580670 UBE2Q2LH0YL09 131 aa16.05■□□□□ 0.16
CDK5RAP3-219ENST00000580670 H3BQV1 296 aa16.05■□□□□ 0.16
CDK5RAP3-219ENST00000580670 PRPF3O43395 683 aaKnown RBP16.05■□□□□ 0.16
CDK5RAP3-219ENST00000580670 PPP1R12BO60237 982 aaPredicted RBP16.05■□□□□ 0.16
CDK5RAP3-219ENST00000580670 DEXIO95424 95 aa16.05■□□□□ 0.16
CDK5RAP3-219ENST00000580670 KLRC3Q07444 240 aa16.05■□□□□ 0.16
CDK5RAP3-219ENST00000580670 ZNF543Q08ER8 600 aa16.05■□□□□ 0.16
CDK5RAP3-219ENST00000580670 IFFO2Q5TF58 517 aa16.05■□□□□ 0.16
CDK5RAP3-219ENST00000580670 MAP1SQ66K74 1059 aaPredicted RBP16.05■□□□□ 0.16
CDK5RAP3-219ENST00000580670 DCAF4Q8WV16 495 aa16.05■□□□□ 0.16
CDK5RAP3-219ENST00000580670 AIFM3Q96NN9 605 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms